RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 AMPHP49418 695 aa28.86■■■□□ 2.21
TPM1-204ENST00000334895 HSP90AB2PQ58FF8 381 aa28.86■■■□□ 2.21
TPM1-204ENST00000334895 COL18A1P39060 1754 aa28.85■■■□□ 2.21
TPM1-204ENST00000334895 KIAA0232Q92628 1395 aa28.85■■■□□ 2.21
TPM1-204ENST00000334895 ZBTB7CA1YPR0 619 aa28.83■■■□□ 2.21
TPM1-204ENST00000334895 IP6K1Q92551 441 aa28.83■■■□□ 2.21
TPM1-204ENST00000334895 FAM9BQ8IZU0 186 aa28.82■■■□□ 2.2
TPM1-204ENST00000334895 DIAPH1O60610 1272 aaKnown RBP28.81■■■□□ 2.2
TPM1-204ENST00000334895 RGPD5Q99666 1765 aa28.81■■■□□ 2.2
TPM1-204ENST00000334895 IL13P35225 146 aa28.8■■■□□ 2.2
TPM1-204ENST00000334895 HAP1P54257 671 aaPredicted RBP28.8■■■□□ 2.2
TPM1-204ENST00000334895 ABCC6O95255 1503 aa28.8■■■□□ 2.2
TPM1-204ENST00000334895 ADAMTS2O95450 1211 aa28.79■■■□□ 2.2
TPM1-204ENST00000334895 EIF4A2Q14240 407 aaKnown RBP28.79■■■□□ 2.2
TPM1-204ENST00000334895 AXIN2Q9Y2T1 843 aa28.79■■■□□ 2.2
TPM1-204ENST00000334895 CHRNA2Q15822 529 aa28.78■■■□□ 2.2
TPM1-204ENST00000334895 MEX3CQ5U5Q3 659 aaKnown RBP28.78■■■□□ 2.2
TPM1-204ENST00000334895 LMO7Q8WWI1 1683 aa28.78■■■□□ 2.2
TPM1-204ENST00000334895 RGPD1P0DJD0 1748 aa28.76■■■□□ 2.2
TPM1-204ENST00000334895 ADAMTS8Q9UP79 889 aa28.76■■■□□ 2.2
TPM1-204ENST00000334895 BLMP54132 1417 aaPredicted RBP28.76■■■□□ 2.19
TPM1-204ENST00000334895 PRDM11Q9NQV5 511 aa28.76■■■□□ 2.19
TPM1-204ENST00000334895 WDR43Q15061 677 aaKnown RBP eCLIP28.75■■■□□ 2.19
TPM1-204ENST00000334895 NUDCQ9Y266 331 aa28.72■■■□□ 2.19
TPM1-204ENST00000334895 CAMTA1Q9Y6Y1 1673 aa28.72■■■□□ 2.19
TPM1-204ENST00000334895 FAM83GA6ND36 823 aa28.72■■■□□ 2.19
TPM1-204ENST00000334895 U2SURPO15042 1029 aaKnown RBP28.72■■■□□ 2.19
TPM1-204ENST00000334895 C8orf37Q96NL8 207 aa28.72■■■□□ 2.19
TPM1-204ENST00000334895 PLCH1Q4KWH8 1693 aa28.72■■■□□ 2.19
TPM1-204ENST00000334895 LTV1Q96GA3 475 aaPredicted RBP28.71■■■□□ 2.19
TPM1-204ENST00000334895 COL14A1Q05707 1796 aaKnown RBP28.7■■■□□ 2.19
TPM1-204ENST00000334895 U2AF1L5P0DN76 240 aaPredicted RBP28.7■■■□□ 2.19
TPM1-204ENST00000334895 U2AF1Q01081 240 aaKnown RBP eCLIP28.7■■■□□ 2.196e-9■■■■□ 21.7
TPM1-204ENST00000334895 PHF23Q9BUL5 403 aaPredicted RBP28.7■■■□□ 2.19
TPM1-204ENST00000334895 RGPD2P0DJD1 1756 aa28.69■■■□□ 2.18
TPM1-204ENST00000334895 ANKRD24Q8TF21 1146 aa28.68■■■□□ 2.18
TPM1-204ENST00000334895 ERBB3P21860 1342 aa28.68■■■□□ 2.18
TPM1-204ENST00000334895 EYA1Q99502 592 aa28.66■■■□□ 2.18
TPM1-204ENST00000334895 COL5A2P05997 1499 aaPredicted RBP28.66■■■□□ 2.18
TPM1-204ENST00000334895 IGSF1Q8N6C5 1336 aa28.65■■■□□ 2.18
TPM1-204ENST00000334895 NGLY1Q96IV0 654 aa28.65■■■□□ 2.18
TPM1-204ENST00000334895 RGS17Q9UGC6 210 aaPredicted RBP28.64■■■□□ 2.18
TPM1-204ENST00000334895 AFF2P51816 1311 aa28.64■■■□□ 2.17
TPM1-204ENST00000334895 NWD2Q9ULI1 1742 aa28.64■■■□□ 2.17
TPM1-204ENST00000334895 HMOX1P09601 288 aa28.63■■■□□ 2.17
TPM1-204ENST00000334895 AEBP1Q8IUX7 1158 aa28.63■■■□□ 2.17
TPM1-204ENST00000334895 NBPF6Q5VWK0 638 aa28.62■■■□□ 2.17
TPM1-204ENST00000334895 NBPF4Q96M43 638 aa28.62■■■□□ 2.17
TPM1-204ENST00000334895 FAM208AQ9UK61 1670 aaKnown RBP28.62■■■□□ 2.17
TPM1-204ENST00000334895 CCDC146Q8IYE0 955 aa28.61■■■□□ 2.17
TPM1-204ENST00000334895 YTHDC1Q96MU7 727 aaKnown RBP28.61■■■□□ 2.17
TPM1-204ENST00000334895 RSPH6AQ9H0K4 717 aa28.61■■■□□ 2.17
TPM1-204ENST00000334895 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.61■■■□□ 2.17
TPM1-204ENST00000334895 NCAPD2Q15021 1401 aa28.61■■■□□ 2.17
TPM1-204ENST00000334895 KDRP35968 1356 aa28.61■■■□□ 2.17
TPM1-204ENST00000334895 SULT6B1Q6IMI4 303 aa28.6■■■□□ 2.17
TPM1-204ENST00000334895 ILDR2Q71H61 639 aa28.6■■■□□ 2.17
TPM1-204ENST00000334895 NRAPQ86VF7 1730 aa28.6■■■□□ 2.17
TPM1-204ENST00000334895 FCHSD2O94868 740 aa28.59■■■□□ 2.17
TPM1-204ENST00000334895 PLEKHF1Q96S99 279 aa28.59■■■□□ 2.17
TPM1-204ENST00000334895 BTG4Q9NY30 223 aa28.59■■■□□ 2.17
TPM1-204ENST00000334895 SLIT2O94813 1529 aa28.59■■■□□ 2.17
TPM1-204ENST00000334895 USHBP1Q8N6Y0 703 aa28.58■■■□□ 2.17
TPM1-204ENST00000334895 WDR17Q8IZU2 1322 aa28.57■■■□□ 2.16
TPM1-204ENST00000334895 FNBP4Q8N3X1 1017 aaPredicted RBP28.57■■■□□ 2.16
TPM1-204ENST00000334895 PRKAR2BP31323 418 aa28.56■■■□□ 2.16
TPM1-204ENST00000334895 BCL9LQ86UU0 1499 aa28.55■■■□□ 2.16
TPM1-204ENST00000334895 SENP3-EIF4A1A0A087X0R7 540 aa28.55■■■□□ 2.16
TPM1-204ENST00000334895 CSB-PGBD3P0DP91 1061 aa28.55■■■□□ 2.16
TPM1-204ENST00000334895 RUNDC1Q96C34 613 aa28.54■■■□□ 2.16
TPM1-204ENST00000334895 USP21Q9UK80 565 aa28.54■■■□□ 2.16
TPM1-204ENST00000334895 STRN4Q9NRL3 753 aa28.54■■■□□ 2.16
TPM1-204ENST00000334895 HNRNPUQ00839 825 aaKnown RBP eCLIP28.53■■■□□ 2.16
TPM1-204ENST00000334895 ZNF772Q68DY9 489 aaPredicted RBP28.53■■■□□ 2.16
TPM1-204ENST00000334895 LARP1Q6PKG0 1096 aaKnown RBP28.53■■■□□ 2.16
TPM1-204ENST00000334895 NLRP2Q9NX02 1062 aa28.53■■■□□ 2.16
TPM1-204ENST00000334895 POTEAQ6S8J7 498 aa28.51■■■□□ 2.15
TPM1-204ENST00000334895 PHACTR3Q96KR7 559 aa28.51■■■□□ 2.15
TPM1-204ENST00000334895 EVA1CP58658 441 aa28.51■■■□□ 2.15
TPM1-204ENST00000334895 APAF1O14727 1248 aa28.5■■■□□ 2.15
TPM1-204ENST00000334895 PNNQ9H307 717 aaKnown RBP28.49■■■□□ 2.15
TPM1-204ENST00000334895 TOM1L2Q6ZVM7 507 aa28.48■■■□□ 2.15
TPM1-204ENST00000334895 CRB1P82279 1406 aa28.48■■■□□ 2.15
TPM1-204ENST00000334895 UNC5CLQ8IV45 518 aa28.47■■■□□ 2.15
TPM1-204ENST00000334895 TCP11L2Q8N4U5 519 aa28.47■■■□□ 2.15
TPM1-204ENST00000334895 MAPK8IP3Q9UPT6 1336 aa28.46■■■□□ 2.15
TPM1-204ENST00000334895 CARD10Q9BWT7 1032 aa28.46■■■□□ 2.15
TPM1-204ENST00000334895 ATRNO75882 1429 aa28.45■■■□□ 2.15
TPM1-204ENST00000334895 QTRT2Q9H974 415 aaKnown RBP28.45■■■□□ 2.14
TPM1-204ENST00000334895 MEGF6O75095 1541 aa28.44■■■□□ 2.14
TPM1-204ENST00000334895 RRP7AQ9Y3A4 280 aaKnown RBP28.43■■■□□ 2.14
TPM1-204ENST00000334895 TRPC5Q9UL62 973 aaPredicted RBP28.43■■■□□ 2.14
TPM1-204ENST00000334895 GLI3P10071 1580 aa28.41■■■□□ 2.14
TPM1-204ENST00000334895 SALL2Q9Y467 1007 aaPredicted RBP28.41■■■□□ 2.14
TPM1-204ENST00000334895 TMPOP42166 694 aaKnown RBP28.4■■■□□ 2.14
TPM1-204ENST00000334895 DLG5Q8TDM6 1919 aa28.4■■■□□ 2.14
TPM1-204ENST00000334895 ZBED9Q6R2W3 1325 aa28.39■■■□□ 2.14
TPM1-204ENST00000334895 NEFMP07197 916 aa28.39■■■□□ 2.13
TPM1-204ENST00000334895 NEUROD2Q15784 382 aa28.38■■■□□ 2.13
TPM1-204ENST00000334895 NFE2L2Q16236 605 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms