RNA–Protein interactions for RNA: ENST00000330168.9

AC004997.1-201, humanhuman

TSL 2

Gene AC004997.1, Length 1,974 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004997.1-201ENST00000330168 NEFMP07197 916 aa19.01■□□□□ 0.63
AC004997.1-201ENST00000330168 SBNO1A3KN83 1393 aa19■□□□□ 0.63
AC004997.1-201ENST00000330168 NFE2L2Q16236 605 aa19■□□□□ 0.63
AC004997.1-201ENST00000330168 BCAR3O75815 825 aa18.99■□□□□ 0.63
AC004997.1-201ENST00000330168 C20orf194Q5TEA3 1177 aa18.99■□□□□ 0.63
AC004997.1-201ENST00000330168 AEBP1Q8IUX7 1158 aa18.99■□□□□ 0.63
AC004997.1-201ENST00000330168 MYH16Q9H6N6 1097 aa18.99■□□□□ 0.63
AC004997.1-201ENST00000330168 C1orf167Q5SNV9 1468 aa18.99■□□□□ 0.63
AC004997.1-201ENST00000330168 FLT4P35916 1363 aa18.99■□□□□ 0.63
AC004997.1-201ENST00000330168 AMPHP49418 695 aa18.99■□□□□ 0.63
AC004997.1-201ENST00000330168 XPCQ01831 940 aaPredicted RBP18.99■□□□□ 0.63
AC004997.1-201ENST00000330168 USP54Q70EL1 1684 aa18.98■□□□□ 0.63
AC004997.1-201ENST00000330168 SULT6B1Q6IMI4 303 aa18.98■□□□□ 0.63
AC004997.1-201ENST00000330168 TSR2Q969E8 191 aaKnown RBP18.97■□□□□ 0.63
AC004997.1-201ENST00000330168 FANCIQ9NVI1 1328 aa18.97■□□□□ 0.63
AC004997.1-201ENST00000330168 STRCQ7RTU9 1775 aa18.96■□□□□ 0.63
AC004997.1-201ENST00000330168 ATF3P18847 181 aa18.96■□□□□ 0.63
AC004997.1-201ENST00000330168 CRBNQ96SW2 442 aa18.96■□□□□ 0.63
AC004997.1-201ENST00000330168 IL16Q14005 1332 aa18.96■□□□□ 0.63
AC004997.1-201ENST00000330168 CCDC136Q96JN2 1154 aa18.95■□□□□ 0.62
AC004997.1-201ENST00000330168 NCOA3Q9Y6Q9 1424 aa18.95■□□□□ 0.62
AC004997.1-201ENST00000330168 RGPD1P0DJD0 1748 aa18.94■□□□□ 0.62
AC004997.1-201ENST00000330168 HOXC9P31274 260 aa18.94■□□□□ 0.62
AC004997.1-201ENST00000330168 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.94■□□□□ 0.62
AC004997.1-201ENST00000330168 MST1RQ04912 1400 aa18.93■□□□□ 0.62
AC004997.1-201ENST00000330168 RARSP54136 660 aaKnown RBP18.93■□□□□ 0.62
AC004997.1-201ENST00000330168 KRT28Q7Z3Y7 464 aa18.93■□□□□ 0.62
AC004997.1-201ENST00000330168 THUMPD2Q9BTF0 503 aaKnown RBP18.93■□□□□ 0.62
AC004997.1-201ENST00000330168 DCCP43146 1447 aa18.92■□□□□ 0.62
AC004997.1-201ENST00000330168 ARHGEF10O15013 1369 aa18.92■□□□□ 0.62
AC004997.1-201ENST00000330168 KIF24Q5T7B8 1368 aa18.92■□□□□ 0.62
AC004997.1-201ENST00000330168 EXOSC9Q06265 439 aaKnown RBP18.91■□□□□ 0.62
AC004997.1-201ENST00000330168 EYA1Q99502 592 aa18.91■□□□□ 0.62
AC004997.1-201ENST00000330168 BCL11AQ9H165 835 aa18.91■□□□□ 0.62
AC004997.1-201ENST00000330168 NFAT5O94916 1531 aa18.9■□□□□ 0.62
AC004997.1-201ENST00000330168 LMOD2Q6P5Q4 547 aa18.9■□□□□ 0.62
AC004997.1-201ENST00000330168 CADPS2Q86UW7 1296 aa18.9■□□□□ 0.62
AC004997.1-201ENST00000330168 KIF1AQ12756 1690 aa18.89■□□□□ 0.62
AC004997.1-201ENST00000330168 IGSF1Q8N6C5 1336 aa18.89■□□□□ 0.61
AC004997.1-201ENST00000330168 FAM83GA6ND36 823 aa18.89■□□□□ 0.61
AC004997.1-201ENST00000330168 PLEKHG5O94827 1062 aa18.88■□□□□ 0.61
AC004997.1-201ENST00000330168 KCNH5Q8NCM2 988 aa18.88■□□□□ 0.61
AC004997.1-201ENST00000330168 DDX17Q92841 729 aaKnown RBP18.88■□□□□ 0.61
AC004997.1-201ENST00000330168 MSH6P52701 1360 aa18.88■□□□□ 0.61
AC004997.1-201ENST00000330168 ZNF335Q9H4Z2 1342 aaPredicted RBP18.88■□□□□ 0.61
AC004997.1-201ENST00000330168 LTV1Q96GA3 475 aaPredicted RBP18.88■□□□□ 0.61
AC004997.1-201ENST00000330168 TRPM3Q9HCF6 1732 aaPredicted RBP18.88■□□□□ 0.61
AC004997.1-201ENST00000330168 LAS1LQ9Y4W2 734 aaKnown RBP18.88■□□□□ 0.61
AC004997.1-201ENST00000330168 KDRP35968 1356 aa18.87■□□□□ 0.61
AC004997.1-201ENST00000330168 LMOD3Q0VAK6 560 aa18.87■□□□□ 0.61
AC004997.1-201ENST00000330168 IP6K1Q92551 441 aa18.87■□□□□ 0.61
AC004997.1-201ENST00000330168 BCL2L13Q9BXK5 485 aa18.87■□□□□ 0.61
AC004997.1-201ENST00000330168 RTL1A6NKG5 1358 aa18.87■□□□□ 0.61
AC004997.1-201ENST00000330168 DLG5Q8TDM6 1919 aa18.87■□□□□ 0.61
AC004997.1-201ENST00000330168 GCP02774 474 aa18.86■□□□□ 0.61
AC004997.1-201ENST00000330168 DCTN1Q14203 1278 aa18.86■□□□□ 0.61
AC004997.1-201ENST00000330168 CT47B1P0C2W7 299 aaPredicted RBP18.86■□□□□ 0.61
AC004997.1-201ENST00000330168 CALD1Q05682 793 aaKnown RBP18.86■□□□□ 0.61
AC004997.1-201ENST00000330168 XIRP1Q702N8 1843 aaKnown RBP18.86■□□□□ 0.61
AC004997.1-201ENST00000330168 ZBTB7CA1YPR0 619 aa18.85■□□□□ 0.61
AC004997.1-201ENST00000330168 FRAT1Q92837 279 aaPredicted RBP18.85■□□□□ 0.61
AC004997.1-201ENST00000330168 LTN1O94822 1766 aa18.85■□□□□ 0.61
AC004997.1-201ENST00000330168 ZNF853P0CG23 659 aa18.84■□□□□ 0.61
AC004997.1-201ENST00000330168 USP19O94966 1318 aa18.84■□□□□ 0.61
AC004997.1-201ENST00000330168 IFT57Q9NWB7 429 aa18.84■□□□□ 0.61
AC004997.1-201ENST00000330168 SLIT3O75094 1523 aa18.84■□□□□ 0.61
AC004997.1-201ENST00000330168 CANXP27824 592 aaKnown RBP18.83■□□□□ 0.61
AC004997.1-201ENST00000330168 GNAI1P63096 354 aa18.83■□□□□ 0.61
AC004997.1-201ENST00000330168 MSH5O43196 834 aa18.82■□□□□ 0.6
AC004997.1-201ENST00000330168 PDE3AQ14432 1141 aa18.82■□□□□ 0.6
AC004997.1-201ENST00000330168 MTHFSDQ2M296 383 aaKnown RBP18.82■□□□□ 0.6
AC004997.1-201ENST00000330168 ARHGEF25Q86VW2 580 aa18.82■□□□□ 0.6
AC004997.1-201ENST00000330168 MBIPQ9NS73 344 aa18.82■□□□□ 0.6
AC004997.1-201ENST00000330168 MCM10Q7L590 875 aa18.81■□□□□ 0.6
AC004997.1-201ENST00000330168 PANK1Q8TE04 598 aa18.81■□□□□ 0.6
AC004997.1-201ENST00000330168 SSH1Q8WYL5 1049 aa18.81■□□□□ 0.6
AC004997.1-201ENST00000330168 CFAP44Q96MT7 982 aa18.81■□□□□ 0.6
AC004997.1-201ENST00000330168 TNNQ9UQP3 1299 aa18.81■□□□□ 0.6
AC004997.1-201ENST00000330168 USHBP1Q8N6Y0 703 aa18.8■□□□□ 0.6
AC004997.1-201ENST00000330168 NPHP3Q7Z494 1330 aa18.8■□□□□ 0.6
AC004997.1-201ENST00000330168 ALS2Q96Q42 1657 aa18.8■□□□□ 0.6
AC004997.1-201ENST00000330168 SMC4Q9NTJ3 1288 aa18.79■□□□□ 0.6
AC004997.1-201ENST00000330168 NBPF6Q5VWK0 638 aa18.79■□□□□ 0.6
AC004997.1-201ENST00000330168 NBPF4Q96M43 638 aa18.79■□□□□ 0.6
AC004997.1-201ENST00000330168 PHRF1Q9P1Y6 1649 aaKnown RBP18.78■□□□□ 0.6
AC004997.1-201ENST00000330168 BRINP3Q76B58 766 aa18.78■□□□□ 0.6
AC004997.1-201ENST00000330168 COG6Q9Y2V7 657 aa18.78■□□□□ 0.6
AC004997.1-201ENST00000330168 RLBP1P12271 317 aa18.77■□□□□ 0.6
AC004997.1-201ENST00000330168 TSPYL6Q8N831 410 aa18.77■□□□□ 0.6
AC004997.1-201ENST00000330168 MED1Q15648 1581 aaPredicted RBP18.77■□□□□ 0.6
AC004997.1-201ENST00000330168 GAS2L2Q8NHY3 880 aa18.77■□□□□ 0.59
AC004997.1-201ENST00000330168 PXDNQ92626 1479 aa18.76■□□□□ 0.59
AC004997.1-201ENST00000330168 VAMP4O75379 141 aa18.76■□□□□ 0.59
AC004997.1-201ENST00000330168 ERICH6Q7L0X2 663 aa18.76■□□□□ 0.59
AC004997.1-201ENST00000330168 LRRC59Q96AG4 307 aaKnown RBP18.76■□□□□ 0.59
AC004997.1-201ENST00000330168 SLAIN2Q9P270 581 aa18.76■□□□□ 0.59
AC004997.1-201ENST00000330168 AXIN2Q9Y2T1 843 aa18.76■□□□□ 0.59
AC004997.1-201ENST00000330168 ZC3H6P61129 1189 aaKnown RBP18.75■□□□□ 0.59
AC004997.1-201ENST00000330168 CLUAP1Q96AJ1 413 aa18.75■□□□□ 0.59
AC004997.1-201ENST00000330168 ELL2O00472 640 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms