RNA–Protein interactions for RNA: ENST00000327578.9

PCM1-202, Transcript of pericentriolar material 1, humanhuman

TSL 5 BASIC

Gene PCM1, Length 8,287 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-202ENST00000327578 MAP4K4O95819 1239 aaPredicted RBP16.22■□□□□ 0.19
PCM1-202ENST00000327578 GOPCQ9HD26 462 aa16.21■□□□□ 0.19
PCM1-202ENST00000327578 SSR1P43307 286 aaKnown RBP16.21■□□□□ 0.18
PCM1-202ENST00000327578 SURF6O75683 361 aaKnown RBP16.2■□□□□ 0.18
PCM1-202ENST00000327578 LARP1BQ659C4 914 aaKnown RBP16.2■□□□□ 0.18
PCM1-202ENST00000327578 ZNF397Q8NF99 534 aaPredicted RBP16.2■□□□□ 0.18
PCM1-202ENST00000327578 PTPN14Q15678 1187 aa16.2■□□□□ 0.18
PCM1-202ENST00000327578 NUP62CLQ9H1M0 184 aa16.2■□□□□ 0.18
PCM1-202ENST00000327578 SPATA32Q96LK8 384 aa16.2■□□□□ 0.18
PCM1-202ENST00000327578 SMTNL1A8MU46 457 aa16.2■□□□□ 0.18
PCM1-202ENST00000327578 CCDC69A6NI79 296 aa16.19■□□□□ 0.18
PCM1-202ENST00000327578 UPF3BQ9BZI7 483 aaKnown RBP16.19■□□□□ 0.18
PCM1-202ENST00000327578 ATP2B2Q01814 1243 aa16.19■□□□□ 0.18
PCM1-202ENST00000327578 TTC39AQ5SRH9 613 aa16.19■□□□□ 0.18
PCM1-202ENST00000327578 GBP3Q9H0R5 595 aa16.19■□□□□ 0.18
PCM1-202ENST00000327578 TAF4BQ92750 862 aa16.19■□□□□ 0.18
PCM1-202ENST00000327578 STAMBPO95630 424 aa16.19■□□□□ 0.18
PCM1-202ENST00000327578 ARHGAP29Q52LW3 1261 aa16.18■□□□□ 0.18
PCM1-202ENST00000327578 SYCE3A1L190 88 aa16.18■□□□□ 0.18
PCM1-202ENST00000327578 MATR3P43243 847 aaKnown RBP eCLIP16.18■□□□□ 0.184e-7■■■■□ 19.4
PCM1-202ENST00000327578 DHX57Q6P158 1386 aaKnown RBP16.18■□□□□ 0.18
PCM1-202ENST00000327578 ZHX1Q9UKY1 873 aaPredicted RBP16.18■□□□□ 0.18
PCM1-202ENST00000327578 PSME1Q06323 249 aa16.18■□□□□ 0.18
PCM1-202ENST00000327578 MICALCLQ6ZW33 695 aa16.18■□□□□ 0.18
PCM1-202ENST00000327578 EIF5P55010 431 aaKnown RBP16.17■□□□□ 0.18
PCM1-202ENST00000327578 CFAP100Q494V2 611 aa16.17■□□□□ 0.18
PCM1-202ENST00000327578 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
PCM1-202ENST00000327578 TNNT1P13805 278 aa16.17■□□□□ 0.18
PCM1-202ENST00000327578 MCM3P25205 808 aa16.17■□□□□ 0.18
PCM1-202ENST00000327578 TRIM22Q8IYM9 498 aa16.17■□□□□ 0.18
PCM1-202ENST00000327578 CEP57L1Q8IYX8 460 aa16.17■□□□□ 0.18
PCM1-202ENST00000327578 RAI14Q9P0K7 980 aa16.17■□□□□ 0.18
PCM1-202ENST00000327578 UBE4AQ14139 1066 aa16.16■□□□□ 0.18
PCM1-202ENST00000327578 CAMK4Q16566 473 aa16.16■□□□□ 0.18
PCM1-202ENST00000327578 KIF18AQ8NI77 898 aa16.16■□□□□ 0.18
PCM1-202ENST00000327578 NEBLO76041 1014 aa16.16■□□□□ 0.18
PCM1-202ENST00000327578 IFFO1Q0D2I5 559 aa16.16■□□□□ 0.18
PCM1-202ENST00000327578 ZSCAN30Q86W11 494 aa16.16■□□□□ 0.18
PCM1-202ENST00000327578 TMX1Q9H3N1 280 aa16.15■□□□□ 0.18
PCM1-202ENST00000327578 FAM107BQ9H098 131 aa16.15■□□□□ 0.18
PCM1-202ENST00000327578 DESP17661 470 aa16.15■□□□□ 0.18
PCM1-202ENST00000327578 PPM1EQ8WY54 764 aa16.15■□□□□ 0.18
PCM1-202ENST00000327578 ZFP91Q96JP5 570 aaPredicted RBP16.15■□□□□ 0.18
PCM1-202ENST00000327578 NOB1Q9ULX3 412 aaKnown RBP16.15■□□□□ 0.18
PCM1-202ENST00000327578 KIF5CO60282 957 aa16.14■□□□□ 0.18
PCM1-202ENST00000327578 CCDC30Q5VVM6 783 aa16.14■□□□□ 0.18
PCM1-202ENST00000327578 GNAI2P04899 355 aa16.14■□□□□ 0.17
PCM1-202ENST00000327578 MCM4P33991 863 aa16.14■□□□□ 0.17
PCM1-202ENST00000327578 CCDC178Q5BJE1 867 aa16.14■□□□□ 0.17
PCM1-202ENST00000327578 PPP4R3BQ5MIZ7 849 aa16.14■□□□□ 0.17
PCM1-202ENST00000327578 SPDYE4A6NLX3 237 aa16.14■□□□□ 0.17
PCM1-202ENST00000327578 MAP3K11Q16584 847 aa16.14■□□□□ 0.17
PCM1-202ENST00000327578 GCC1Q96CN9 775 aa16.14■□□□□ 0.17
PCM1-202ENST00000327578 ANAPC15P60006 121 aa16.14■□□□□ 0.17
PCM1-202ENST00000327578 NUP133Q8WUM0 1156 aa16.14■□□□□ 0.17
PCM1-202ENST00000327578 CNTLNQ9NXG0 1405 aa16.14■□□□□ 0.17
PCM1-202ENST00000327578 AKNAQ7Z591 1439 aa16.14■□□□□ 0.17
PCM1-202ENST00000327578 GTF2F1P35269 517 aaKnown RBP eCLIP16.14■□□□□ 0.17
PCM1-202ENST00000327578 ERC1Q8IUD2 1116 aa16.14■□□□□ 0.17
PCM1-202ENST00000327578 URI1O94763 535 aaPredicted RBP16.13■□□□□ 0.17
PCM1-202ENST00000327578 SPATA24Q86W54 205 aa16.13■□□□□ 0.17
PCM1-202ENST00000327578 IMMTQ16891 758 aaKnown RBP16.13■□□□□ 0.17
PCM1-202ENST00000327578 GCOM1H8Y6P7 765 aaPredicted RBP16.13■□□□□ 0.17
PCM1-202ENST00000327578 MYZAPP0CAP1 466 aa16.13■□□□□ 0.17
PCM1-202ENST00000327578 NOL7Q9UMY1 257 aaKnown RBP16.13■□□□□ 0.17
PCM1-202ENST00000327578 SPA17Q15506 151 aa16.12■□□□□ 0.17
PCM1-202ENST00000327578 KIF6Q6ZMV9 814 aa16.12■□□□□ 0.17
PCM1-202ENST00000327578 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.12■□□□□ 0.17
PCM1-202ENST00000327578 GNAI3P08754 354 aa16.12■□□□□ 0.17
PCM1-202ENST00000327578 SSBP05455 408 aaKnown RBP eCLIP16.12■□□□□ 0.17
PCM1-202ENST00000327578 GTF2A1P52655 376 aaPredicted RBP16.12■□□□□ 0.17
PCM1-202ENST00000327578 BACH2Q9BYV9 841 aa16.12■□□□□ 0.17
PCM1-202ENST00000327578 CCDC158Q5M9N0 1113 aa16.12■□□□□ 0.17
PCM1-202ENST00000327578 KIF2AO00139 706 aaPredicted RBP16.11■□□□□ 0.17
PCM1-202ENST00000327578 VGFO15240 615 aaPredicted RBP16.11■□□□□ 0.17
PCM1-202ENST00000327578 FAM177BA6PVY3 158 aa16.11■□□□□ 0.17
PCM1-202ENST00000327578 ZSCAN12O43309 604 aa16.11■□□□□ 0.17
PCM1-202ENST00000327578 CDCA7LQ96GN5 454 aa16.11■□□□□ 0.17
PCM1-202ENST00000327578 CNNM1Q9NRU3 951 aa16.11■□□□□ 0.17
PCM1-202ENST00000327578 CTR9Q6PD62 1173 aa16.1■□□□□ 0.17
PCM1-202ENST00000327578 KLHL34Q8N239 644 aa16.1■□□□□ 0.17
PCM1-202ENST00000327578 ZNF428Q96B54 188 aa16.1■□□□□ 0.17
PCM1-202ENST00000327578 KIF4BQ2VIQ3 1234 aa16.1■□□□□ 0.17
PCM1-202ENST00000327578 LUZP1Q86V48 1076 aa16.1■□□□□ 0.17
PCM1-202ENST00000327578 PDRG1Q9NUG6 133 aa16.1■□□□□ 0.17
PCM1-202ENST00000327578 CCDC175P0C221 793 aa16.1■□□□□ 0.17
PCM1-202ENST00000327578 XPCQ01831 940 aaPredicted RBP16.09■□□□□ 0.17
PCM1-202ENST00000327578 BMP2KQ9NSY1 1161 aaPredicted RBP16.09■□□□□ 0.17
PCM1-202ENST00000327578 TRMT1Q9NXH9 659 aaKnown RBP16.09■□□□□ 0.17
PCM1-202ENST00000327578 CCDC7Q96M83 1385 aa16.09■□□□□ 0.17
PCM1-202ENST00000327578 GSTTP1A0A1W2PQM5 241 aa16.09■□□□□ 0.17
PCM1-202ENST00000327578 SIL1Q9H173 461 aa16.09■□□□□ 0.17
PCM1-202ENST00000327578 SFPQP23246 707 aaKnown RBP eCLIP16.09■□□□□ 0.17
PCM1-202ENST00000327578 SOGA3Q5TF21 947 aa16.09■□□□□ 0.17
PCM1-202ENST00000327578 ADAMTS8Q9UP79 889 aa16.09■□□□□ 0.17
PCM1-202ENST00000327578 CCDC57Q2TAC2 916 aa16.08■□□□□ 0.17
PCM1-202ENST00000327578 FHOD3Q2V2M9 1422 aa16.08■□□□□ 0.16
PCM1-202ENST00000327578 CDKL5O76039 1030 aa16.08■□□□□ 0.16
PCM1-202ENST00000327578 DNA2P51530 1060 aa16.08■□□□□ 0.16
PCM1-202ENST00000327578 BLOC1S2Q6QNY1 142 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms