RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 EP400Q96L91 3159 aa40.47■■■■■ 4.07
SYNGR1-202ENST00000318801 USP54Q70EL1 1684 aa40.46■■■■■ 4.07
SYNGR1-202ENST00000318801 TOM1L2Q6ZVM7 507 aa40.46■■■■■ 4.07
SYNGR1-202ENST00000318801 POLR3GLQ9BT43 218 aa40.45■■■■■ 4.07
SYNGR1-202ENST00000318801 CRB1P82279 1406 aa40.45■■■■■ 4.07
SYNGR1-202ENST00000318801 NFAT5O94916 1531 aa40.45■■■■■ 4.07
SYNGR1-202ENST00000318801 CSB-PGBD3P0DP91 1061 aa40.44■■■■■ 4.06
SYNGR1-202ENST00000318801 AXIN2Q9Y2T1 843 aa40.44■■■■■ 4.06
SYNGR1-202ENST00000318801 SF3B2Q13435 895 aaKnown RBP40.42■■■■■ 4.06
SYNGR1-202ENST00000318801 WDR17Q8IZU2 1322 aa40.41■■■■■ 4.06
SYNGR1-202ENST00000318801 COL18A1P39060 1754 aa40.41■■■■■ 4.06
SYNGR1-202ENST00000318801 OVOS2A0A0J9YW53 1432 aa40.39■■■■■ 4.06
SYNGR1-202ENST00000318801 OVOS2Q6IE36 1432 aa40.39■■■■■ 4.06
SYNGR1-202ENST00000318801 PDE3BQ13370 1112 aa40.38■■■■■ 4.06
SYNGR1-202ENST00000318801 ABCC6O95255 1503 aa40.38■■■■■ 4.05
SYNGR1-202ENST00000318801 THSD7AQ9UPZ6 1657 aa40.37■■■■■ 4.05
SYNGR1-202ENST00000318801 BLMP54132 1417 aaPredicted RBP40.35■■■■■ 4.05
SYNGR1-202ENST00000318801 FYB1O15117 783 aa40.35■■■■■ 4.05
SYNGR1-202ENST00000318801 RGPD5Q99666 1765 aa40.33■■■■■ 4.05
SYNGR1-202ENST00000318801 LTN1O94822 1766 aa40.32■■■■■ 4.04
SYNGR1-202ENST00000318801 CDCA7Q9BWT1 371 aaPredicted RBP40.31■■■■■ 4.04
SYNGR1-202ENST00000318801 CARD10Q9BWT7 1032 aa40.31■■■■■ 4.04
SYNGR1-202ENST00000318801 GGNBP2Q9H3C7 697 aa40.31■■■■■ 4.04
SYNGR1-202ENST00000318801 FAM196AQ6ZSG2 479 aa40.28■■■■■ 4.04
SYNGR1-202ENST00000318801 MYOM1P52179 1685 aa40.27■■■■■ 4.04
SYNGR1-202ENST00000318801 CARD14Q9BXL6 1004 aa40.27■■■■■ 4.04
SYNGR1-202ENST00000318801 IP6K1Q92551 441 aa40.26■■■■■ 4.04
SYNGR1-202ENST00000318801 AMPHP49418 695 aa40.25■■■■■ 4.03
SYNGR1-202ENST00000318801 FAM182BQ5T319 152 aa40.24■■■■■ 4.03
SYNGR1-202ENST00000318801 NSD3Q9BZ95 1437 aa40.24■■■■■ 4.03
SYNGR1-202ENST00000318801 C11orf95C9JLR9 678 aaPredicted RBP40.23■■■■■ 4.03
SYNGR1-202ENST00000318801 NLRP2Q9NX02 1062 aa40.23■■■■■ 4.03
SYNGR1-202ENST00000318801 CGNL1Q0VF96 1302 aa40.23■■■■■ 4.03
SYNGR1-202ENST00000318801 CCDC7Q96M83 1385 aa40.23■■■■■ 4.03
SYNGR1-202ENST00000318801 ANKRD24Q8TF21 1146 aa40.23■■■■■ 4.03
SYNGR1-202ENST00000318801 ERBB3P21860 1342 aa40.22■■■■■ 4.03
SYNGR1-202ENST00000318801 DDB1Q16531 1140 aa40.22■■■■■ 4.03
SYNGR1-202ENST00000318801 KIF20BQ96Q89 1820 aa40.2■■■■■ 4.03
SYNGR1-202ENST00000318801 MAP3K19Q56UN5 1328 aa40.19■■■■■ 4.02
SYNGR1-202ENST00000318801 PARP4Q9UKK3 1724 aaKnown RBP40.17■■■■■ 4.02
SYNGR1-202ENST00000318801 BAG6P46379 1132 aa40.17■■■■■ 4.02
SYNGR1-202ENST00000318801 HOXC9P31274 260 aa40.14■■■■■ 4.02
SYNGR1-202ENST00000318801 EXOC5O00471 708 aa40.13■■■■■ 4.02
SYNGR1-202ENST00000318801 FBLN1P23142 703 aa40.13■■■■■ 4.02
SYNGR1-202ENST00000318801 LTV1Q96GA3 475 aaPredicted RBP40.13■■■■■ 4.02
SYNGR1-202ENST00000318801 PANK3Q9H999 370 aa40.13■■■■■ 4.02
SYNGR1-202ENST00000318801 RRS1Q15050 365 aaKnown RBP40.11■■■■■ 4.01
SYNGR1-202ENST00000318801 RTL1A6NKG5 1358 aa40.11■■■■■ 4.01
SYNGR1-202ENST00000318801 DEFB132Q7Z7B7 95 aa40.1■■■■■ 4.01
SYNGR1-202ENST00000318801 RGPD1P0DJD0 1748 aa40.09■■■■■ 4.01
SYNGR1-202ENST00000318801 TRIM37O94972 964 aa40.09■■■■■ 4.01
SYNGR1-202ENST00000318801 IL2RBP14784 551 aa40.07■■■■■ 4
SYNGR1-202ENST00000318801 KIF24Q5T7B8 1368 aa40.05■■■■■ 4
SYNGR1-202ENST00000318801 WNK3Q9BYP7 1800 aa40.05■■■■■ 4
SYNGR1-202ENST00000318801 OVOS2A0A0G2JMS6 1433 aa40.04■■■■■ 4
SYNGR1-202ENST00000318801 SMG6Q86US8 1419 aaKnown RBP40.03■■■■■ 4
SYNGR1-202ENST00000318801 FAM208AQ9UK61 1670 aaKnown RBP40.03■■■■■ 4
SYNGR1-202ENST00000318801 LRRC37A3O60309 1634 aa40.02■■■■■ 4
SYNGR1-202ENST00000318801 DISP2A7MBM2 1401 aa40.01■■■■■ 4
SYNGR1-202ENST00000318801 KNSTRNQ9Y448 316 aa40.01■■■■■ 4
SYNGR1-202ENST00000318801 KIF7Q2M1P5 1343 aa40■■■■□ 3.99
SYNGR1-202ENST00000318801 FLT4P35916 1363 aa40■■■■□ 3.99
SYNGR1-202ENST00000318801 APBA3O96018 575 aa39.99■■■■□ 3.99
SYNGR1-202ENST00000318801 PPM1GO15355 546 aaPredicted RBP39.97■■■■□ 3.99
SYNGR1-202ENST00000318801 EN1Q05925 392 aaPredicted RBP39.97■■■■□ 3.99
SYNGR1-202ENST00000318801 NSD2O96028 1365 aa39.96■■■■□ 3.99
SYNGR1-202ENST00000318801 INSRP06213 1382 aa39.96■■■■□ 3.99
SYNGR1-202ENST00000318801 MARCH10Q8NA82 808 aaPredicted RBP39.96■■■■□ 3.99
SYNGR1-202ENST00000318801 HSP90AB2PQ58FF8 381 aa39.94■■■■□ 3.98
SYNGR1-202ENST00000318801 TNS2Q63HR2 1409 aa39.92■■■■□ 3.98
SYNGR1-202ENST00000318801 EMILIN1Q9Y6C2 1016 aa39.92■■■■□ 3.98
SYNGR1-202ENST00000318801 TNNT2P45379 298 aaPredicted RBP39.9■■■■□ 3.98
SYNGR1-202ENST00000318801 TNS1Q9HBL0 1735 aaKnown RBP39.9■■■■□ 3.98
SYNGR1-202ENST00000318801 MAP2P11137 1827 aaKnown RBP39.89■■■■□ 3.98
SYNGR1-202ENST00000318801 MORC1Q86VD1 984 aa39.88■■■■□ 3.97
SYNGR1-202ENST00000318801 ANKRD26Q9UPS8 1709 aa39.88■■■■□ 3.97
SYNGR1-202ENST00000318801 BCL9O00512 1426 aa39.87■■■■□ 3.97
SYNGR1-202ENST00000318801 BCL11BQ9C0K0 894 aaPredicted RBP39.87■■■■□ 3.97
SYNGR1-202ENST00000318801 PARD3Q8TEW0 1356 aa39.87■■■■□ 3.97
SYNGR1-202ENST00000318801 NBPF6Q5VWK0 638 aa39.86■■■■□ 3.97
SYNGR1-202ENST00000318801 NBPF4Q96M43 638 aa39.86■■■■□ 3.97
SYNGR1-202ENST00000318801 PEAK1Q9H792 1746 aa39.86■■■■□ 3.97
SYNGR1-202ENST00000318801 RAPGEF4Q8WZA2 1011 aa39.85■■■■□ 3.97
SYNGR1-202ENST00000318801 WASHC2AQ641Q2 1341 aa39.85■■■■□ 3.97
SYNGR1-202ENST00000318801 POLKQ9UBT6 870 aa39.84■■■■□ 3.97
SYNGR1-202ENST00000318801 EZH2Q15910 746 aaKnown RBP39.84■■■■□ 3.97
SYNGR1-202ENST00000318801 CAMKK2Q96RR4 588 aa39.84■■■■□ 3.97
SYNGR1-202ENST00000318801 RGPD2P0DJD1 1756 aa39.81■■■■□ 3.96
SYNGR1-202ENST00000318801 SBF2Q86WG5 1849 aa39.81■■■■□ 3.96
SYNGR1-202ENST00000318801 DDX54Q8TDD1 881 aaKnown RBP39.8■■■■□ 3.96
SYNGR1-202ENST00000318801 KAT6BQ8WYB5 2073 aa39.79■■■■□ 3.96
SYNGR1-202ENST00000318801 ZCRB1Q8TBF4 217 aaKnown RBP39.79■■■■□ 3.96
SYNGR1-202ENST00000318801 TATP17735 454 aaPredicted RBP39.77■■■■□ 3.96
SYNGR1-202ENST00000318801 USHBP1Q8N6Y0 703 aa39.77■■■■□ 3.96
SYNGR1-202ENST00000318801 PLSCR1O15162 318 aa39.75■■■■□ 3.95
SYNGR1-202ENST00000318801 AMER1Q5JTC6 1135 aaPredicted RBP39.72■■■■□ 3.95
SYNGR1-202ENST00000318801 NBPF14Q5TI25 921 aa39.71■■■■□ 3.95
SYNGR1-202ENST00000318801 PER1O15534 1290 aaPredicted RBP39.69■■■■□ 3.94
SYNGR1-202ENST00000318801 ACSBG1Q96GR2 724 aa39.69■■■■□ 3.94
SYNGR1-202ENST00000318801 MEGF6O75095 1541 aa39.67■■■■□ 3.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms