RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 USP8P40818 1118 aa22.5■■□□□ 1.19
UBE2N-201ENST00000318066 SYCP1Q15431 976 aa22.5■■□□□ 1.19
UBE2N-201ENST00000318066 CTNNA3Q9UI47 895 aa22.5■■□□□ 1.19
UBE2N-201ENST00000318066 EFCAB5A4FU69 1503 aa22.5■■□□□ 1.19
UBE2N-201ENST00000318066 SYTL4Q96C24 671 aaPredicted RBP22.5■■□□□ 1.19
UBE2N-201ENST00000318066 TSPYL1Q9H0U9 437 aa22.49■■□□□ 1.19
UBE2N-201ENST00000318066 LARP1BQ659C4 914 aaKnown RBP22.49■■□□□ 1.19
UBE2N-201ENST00000318066 FMNL2Q96PY5 1086 aa22.49■■□□□ 1.19
UBE2N-201ENST00000318066 DNAJC2Q99543 621 aaKnown RBP22.49■■□□□ 1.19
UBE2N-201ENST00000318066 KIF6Q6ZMV9 814 aa22.49■■□□□ 1.19
UBE2N-201ENST00000318066 NOL7Q9UMY1 257 aaKnown RBP22.49■■□□□ 1.19
UBE2N-201ENST00000318066 HDGFL1Q5TGJ6 251 aa22.49■■□□□ 1.19
UBE2N-201ENST00000318066 SMTNL1A8MU46 457 aa22.48■■□□□ 1.19
UBE2N-201ENST00000318066 KIAA0754O94854 1291 aa22.48■■□□□ 1.19
UBE2N-201ENST00000318066 CFAP70Q5T0N1 1121 aa22.48■■□□□ 1.19
UBE2N-201ENST00000318066 BLOC1S2Q6QNY1 142 aa22.48■■□□□ 1.19
UBE2N-201ENST00000318066 ZFYVE27Q5T4F4 411 aa22.48■■□□□ 1.19
UBE2N-201ENST00000318066 SLC4A2P04920 1241 aa22.47■■□□□ 1.19
UBE2N-201ENST00000318066 ME1P48163 572 aa22.47■■□□□ 1.19
UBE2N-201ENST00000318066 MSH5O43196 834 aa22.47■■□□□ 1.19
UBE2N-201ENST00000318066 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.47■■□□□ 1.19
UBE2N-201ENST00000318066 RPGRIP1LQ68CZ1 1315 aa22.47■■□□□ 1.19
UBE2N-201ENST00000318066 TAF3Q5VWG9 929 aa22.46■■□□□ 1.19
UBE2N-201ENST00000318066 ANKRD18AQ8IVF6 992 aa22.46■■□□□ 1.19
UBE2N-201ENST00000318066 EHBP1L1Q8N3D4 1523 aa22.46■■□□□ 1.19
UBE2N-201ENST00000318066 NUP62CLQ9H1M0 184 aa22.46■■□□□ 1.19
UBE2N-201ENST00000318066 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.46■■□□□ 1.196e-6■■■■■ 48.1
UBE2N-201ENST00000318066 ZSCAN30Q86W11 494 aa22.45■■□□□ 1.19
UBE2N-201ENST00000318066 OSCARQ8IYS5 282 aa22.45■■□□□ 1.18
UBE2N-201ENST00000318066 TTC39AQ5SRH9 613 aa22.45■■□□□ 1.18
UBE2N-201ENST00000318066 SYNJ2O15056 1496 aa22.45■■□□□ 1.18
UBE2N-201ENST00000318066 WASF1Q92558 559 aa22.44■■□□□ 1.18
UBE2N-201ENST00000318066 GBP3Q9H0R5 595 aa22.44■■□□□ 1.18
UBE2N-201ENST00000318066 ATAD2Q6PL18 1390 aa22.44■■□□□ 1.18
UBE2N-201ENST00000318066 BCAR3O75815 825 aa22.44■■□□□ 1.18
UBE2N-201ENST00000318066 CCDC181Q5TID7 509 aa22.44■■□□□ 1.18
UBE2N-201ENST00000318066 AKNAQ7Z591 1439 aa22.44■■□□□ 1.18
UBE2N-201ENST00000318066 FCHSD2O94868 740 aa22.44■■□□□ 1.18
UBE2N-201ENST00000318066 TTLL5Q6EMB2 1281 aa22.44■■□□□ 1.18
UBE2N-201ENST00000318066 SPATA32Q96LK8 384 aa22.44■■□□□ 1.18
UBE2N-201ENST00000318066 TMEM132EQ6IEE7 984 aa22.44■■□□□ 1.18
UBE2N-201ENST00000318066 ARHGAP5Q13017 1502 aa22.43■■□□□ 1.18
UBE2N-201ENST00000318066 KRT18P05783 430 aaKnown RBP22.43■■□□□ 1.18
UBE2N-201ENST00000318066 SPC24Q8NBT2 197 aa22.43■■□□□ 1.18
UBE2N-201ENST00000318066 SLC52A1Q9NWF4 448 aa22.43■■□□□ 1.18
UBE2N-201ENST00000318066 ERBINQ96RT1 1412 aa22.43■■□□□ 1.18
UBE2N-201ENST00000318066 ATP2B1P20020 1258 aa22.42■■□□□ 1.18
UBE2N-201ENST00000318066 CCDC57Q2TAC2 916 aa22.42■■□□□ 1.18
UBE2N-201ENST00000318066 PLEKHH1Q9ULM0 1364 aa22.42■■□□□ 1.18
UBE2N-201ENST00000318066 DEF6Q9H4E7 631 aa22.42■■□□□ 1.18
UBE2N-201ENST00000318066 ANKRD30BQ9BXX2 1392 aa22.42■■□□□ 1.18
UBE2N-201ENST00000318066 PDRG1Q9NUG6 133 aa22.41■■□□□ 1.18
UBE2N-201ENST00000318066 TATP17735 454 aaPredicted RBP22.41■■□□□ 1.18
UBE2N-201ENST00000318066 FYB1O15117 783 aa22.41■■□□□ 1.18
UBE2N-201ENST00000318066 ABTB2Q8N961 1025 aa22.4■■□□□ 1.18
UBE2N-201ENST00000318066 UQCRHLA0A096LP55 91 aa22.4■■□□□ 1.18
UBE2N-201ENST00000318066 UQCRHP07919 91 aa22.4■■□□□ 1.18
UBE2N-201ENST00000318066 BRPF1P55201 1214 aaPredicted RBP22.4■■□□□ 1.18
UBE2N-201ENST00000318066 POLA1P09884 1462 aaPredicted RBP22.4■■□□□ 1.18
UBE2N-201ENST00000318066 CCDC69A6NI79 296 aa22.4■■□□□ 1.18
UBE2N-201ENST00000318066 UPF3BQ9BZI7 483 aaKnown RBP22.4■■□□□ 1.18
UBE2N-201ENST00000318066 BMP2KQ9NSY1 1161 aaPredicted RBP22.39■■□□□ 1.17
UBE2N-201ENST00000318066 ABCC11Q96J66 1382 aa22.39■■□□□ 1.17
UBE2N-201ENST00000318066 MAP3K11Q16584 847 aa22.39■■□□□ 1.17
UBE2N-201ENST00000318066 TSR2Q969E8 191 aaKnown RBP22.39■■□□□ 1.17
UBE2N-201ENST00000318066 CNNM1Q9NRU3 951 aa22.39■■□□□ 1.17
UBE2N-201ENST00000318066 IKQ13123 557 aaPredicted RBP22.38■■□□□ 1.17
UBE2N-201ENST00000318066 C9orf84Q5VXU9 1444 aa22.38■■□□□ 1.17
UBE2N-201ENST00000318066 AQRO60306 1485 aaKnown RBP eCLIP22.38■■□□□ 1.17
UBE2N-201ENST00000318066 C1orf115Q9H7X2 142 aa22.38■■□□□ 1.17
UBE2N-201ENST00000318066 SLFN5Q08AF3 891 aa22.37■■□□□ 1.17
UBE2N-201ENST00000318066 CEP131Q9UPN4 1083 aa22.37■■□□□ 1.17
UBE2N-201ENST00000318066 WWC2Q6AWC2 1192 aa22.37■■□□□ 1.17
UBE2N-201ENST00000318066 SOGA3Q5TF21 947 aa22.37■■□□□ 1.17
UBE2N-201ENST00000318066 SULT6B1Q6IMI4 303 aa22.37■■□□□ 1.17
UBE2N-201ENST00000318066 CNKSR2Q8WXI2 1034 aa22.37■■□□□ 1.17
UBE2N-201ENST00000318066 PRDM2Q13029 1718 aa22.36■■□□□ 1.17
UBE2N-201ENST00000318066 UBXN4Q92575 508 aa22.36■■□□□ 1.17
UBE2N-201ENST00000318066 SCAND2PQ9GZW5 306 aaPredicted RBP22.36■■□□□ 1.17
UBE2N-201ENST00000318066 GRIN2BQ13224 1484 aa22.36■■□□□ 1.17
UBE2N-201ENST00000318066 CEBPZQ03701 1054 aaKnown RBP22.35■■□□□ 1.17
UBE2N-201ENST00000318066 PRAM1Q96QH2 718 aa22.35■■□□□ 1.17
UBE2N-201ENST00000318066 RAB11FIP3O75154 756 aa22.35■■□□□ 1.17
UBE2N-201ENST00000318066 DHX29Q7Z478 1369 aaKnown RBP22.35■■□□□ 1.17
UBE2N-201ENST00000318066 NBPF1Q3BBV0 1214 aa22.34■■□□□ 1.17
UBE2N-201ENST00000318066 ALDH1L2Q3SY69 923 aa22.34■■□□□ 1.17
UBE2N-201ENST00000318066 SH2B1Q9NRF2 756 aaPredicted RBP22.34■■□□□ 1.17
UBE2N-201ENST00000318066 ZSCAN12O43309 604 aa22.34■■□□□ 1.17
UBE2N-201ENST00000318066 RBM10P98175 930 aaKnown RBP22.34■■□□□ 1.17
UBE2N-201ENST00000318066 SLC12A5Q9H2X9 1139 aa22.34■■□□□ 1.17
UBE2N-201ENST00000318066 ARAP1Q96P48 1450 aa22.34■■□□□ 1.17
UBE2N-201ENST00000318066 SPG7Q9UQ90 795 aa22.34■■□□□ 1.17
UBE2N-201ENST00000318066 CFTRP13569 1480 aa22.34■■□□□ 1.17
UBE2N-201ENST00000318066 MCM3P25205 808 aa22.34■■□□□ 1.17
UBE2N-201ENST00000318066 AEBP2Q6ZN18 517 aaPredicted RBP22.33■■□□□ 1.17
UBE2N-201ENST00000318066 JAKMIP1Q96N16 626 aaKnown RBP22.33■■□□□ 1.17
UBE2N-201ENST00000318066 NBPF8Q3BBV2 869 aa22.33■■□□□ 1.17
UBE2N-201ENST00000318066 NEFHP12036 1026 aa22.33■■□□□ 1.17
UBE2N-201ENST00000318066 SEPT7Q16181 437 aaKnown RBP22.33■■□□□ 1.17
UBE2N-201ENST00000318066 EPB41L2O43491 1005 aaKnown RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms