RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 MARCH6O60337 910 aa15.55■□□□□ 0.08
SH3PXD2A-201ENST00000315994 MCTP1Q6DN14 999 aa15.55■□□□□ 0.08
SH3PXD2A-201ENST00000315994 NUTM2BA6NNL0 878 aaPredicted RBP15.54■□□□□ 0.08
SH3PXD2A-201ENST00000315994 NUTM2EB1AL46 878 aaPredicted RBP15.54■□□□□ 0.08
SH3PXD2A-201ENST00000315994 WASHC4Q2M389 1173 aa15.54■□□□□ 0.08
SH3PXD2A-201ENST00000315994 NUTM2AQ8IVF1 878 aaPredicted RBP15.54■□□□□ 0.08
SH3PXD2A-201ENST00000315994 ERICH2A1L162 156 aa15.54■□□□□ 0.08
SH3PXD2A-201ENST00000315994 AMOTQ4VCS5 1084 aa15.54■□□□□ 0.08
SH3PXD2A-201ENST00000315994 NUCB2P80303 420 aa15.53■□□□□ 0.08
SH3PXD2A-201ENST00000315994 CEP170Q5SW79 1584 aa15.53■□□□□ 0.08
SH3PXD2A-201ENST00000315994 LRPPRCP42704 1394 aaKnown RBP15.53■□□□□ 0.08
SH3PXD2A-201ENST00000315994 TTC21BQ7Z4L5 1316 aa15.53■□□□□ 0.08
SH3PXD2A-201ENST00000315994 LRRCC1Q9C099 1032 aa15.53■□□□□ 0.08
SH3PXD2A-201ENST00000315994 CTDP1Q9Y5B0 961 aaPredicted RBP15.53■□□□□ 0.08
SH3PXD2A-201ENST00000315994 SMC3Q9UQE7 1217 aa15.53■□□□□ 0.08
SH3PXD2A-201ENST00000315994 NKTRP30414 1462 aaKnown RBP15.53■□□□□ 0.08
SH3PXD2A-201ENST00000315994 RIMS2Q9UQ26 1411 aa15.53■□□□□ 0.08
SH3PXD2A-201ENST00000315994 PSMA5P28066 241 aa15.53■□□□□ 0.08
SH3PXD2A-201ENST00000315994 ALDH1L2Q3SY69 923 aa15.52■□□□□ 0.08
SH3PXD2A-201ENST00000315994 NFXL1Q6ZNB6 911 aa15.52■□□□□ 0.08
SH3PXD2A-201ENST00000315994 VSIG10Q8N0Z9 540 aa15.52■□□□□ 0.08
SH3PXD2A-201ENST00000315994 RALYLQ86SE5 291 aaKnown RBP15.52■□□□□ 0.07
SH3PXD2A-201ENST00000315994 MYL6BP14649 208 aa15.52■□□□□ 0.07
SH3PXD2A-201ENST00000315994 MCM10Q7L590 875 aa15.52■□□□□ 0.07
SH3PXD2A-201ENST00000315994 FBXW7Q969H0 707 aa15.52■□□□□ 0.07
SH3PXD2A-201ENST00000315994 FOXD4L6Q3SYB3 417 aaPredicted RBP15.51■□□□□ 0.07
SH3PXD2A-201ENST00000315994 FOXD4L3Q6VB84 417 aaPredicted RBP15.51■□□□□ 0.07
SH3PXD2A-201ENST00000315994 TBC1D2BQ9UPU7 963 aa15.51■□□□□ 0.07
SH3PXD2A-201ENST00000315994 TARBP1Q13395 1621 aaKnown RBP15.51■□□□□ 0.07
SH3PXD2A-201ENST00000315994 ADGRL2O95490 1459 aa15.51■□□□□ 0.07
SH3PXD2A-201ENST00000315994 ARHGEF12Q9NZN5 1544 aa15.51■□□□□ 0.07
SH3PXD2A-201ENST00000315994 VPS53Q5VIR6 699 aa15.51■□□□□ 0.07
SH3PXD2A-201ENST00000315994 FOXO3O43524 673 aa15.5■□□□□ 0.07
SH3PXD2A-201ENST00000315994 DUSP27Q5VZP5 1158 aa15.5■□□□□ 0.07
SH3PXD2A-201ENST00000315994 RPAP2Q8IXW5 612 aaPredicted RBP15.5■□□□□ 0.07
SH3PXD2A-201ENST00000315994 DNAJC2Q99543 621 aaKnown RBP15.5■□□□□ 0.07
SH3PXD2A-201ENST00000315994 ACEP12821 1306 aa15.5■□□□□ 0.07
SH3PXD2A-201ENST00000315994 FAM177BA6PVY3 158 aa15.5■□□□□ 0.07
SH3PXD2A-201ENST00000315994 THUMPD2Q9BTF0 503 aaKnown RBP15.5■□□□□ 0.07
SH3PXD2A-201ENST00000315994 TAF7Q15545 349 aaPredicted RBP15.49■□□□□ 0.07
SH3PXD2A-201ENST00000315994 ASXL1Q8IXJ9 1541 aa15.49■□□□□ 0.07
SH3PXD2A-201ENST00000315994 CCDC158Q5M9N0 1113 aa15.49■□□□□ 0.07
SH3PXD2A-201ENST00000315994 CHD1LQ86WJ1 897 aa15.49■□□□□ 0.07
SH3PXD2A-201ENST00000315994 CNNM1Q9NRU3 951 aa15.49■□□□□ 0.07
SH3PXD2A-201ENST00000315994 RARSP54136 660 aaKnown RBP15.48■□□□□ 0.07
SH3PXD2A-201ENST00000315994 CCDC27Q2M243 656 aa15.48■□□□□ 0.07
SH3PXD2A-201ENST00000315994 TMEM57Q8N5G2 664 aa15.48■□□□□ 0.07
SH3PXD2A-201ENST00000315994 CWC22Q9HCG8 908 aaKnown RBP15.48■□□□□ 0.07
SH3PXD2A-201ENST00000315994 PIP4K2BP78356 416 aa15.48■□□□□ 0.07
SH3PXD2A-201ENST00000315994 VPS37CA5D8V6 355 aaPredicted RBP15.47■□□□□ 0.07
SH3PXD2A-201ENST00000315994 DCTN1Q14203 1278 aa15.47■□□□□ 0.07
SH3PXD2A-201ENST00000315994 HSP90AA2PQ14568 343 aaPredicted RBP15.47■□□□□ 0.07
SH3PXD2A-201ENST00000315994 TTC39AQ5SRH9 613 aa15.47■□□□□ 0.07
SH3PXD2A-201ENST00000315994 KRT28Q7Z3Y7 464 aa15.47■□□□□ 0.07
SH3PXD2A-201ENST00000315994 MIS18AQ9NYP9 233 aa15.47■□□□□ 0.07
SH3PXD2A-201ENST00000315994 MAST1Q9Y2H9 1570 aa15.47■□□□□ 0.07
SH3PXD2A-201ENST00000315994 PZPP20742 1482 aa15.47■□□□□ 0.07
SH3PXD2A-201ENST00000315994 GSE1Q14687 1217 aa15.47■□□□□ 0.07
SH3PXD2A-201ENST00000315994 PUS7Q96PZ0 661 aaKnown RBP15.47■□□□□ 0.07
SH3PXD2A-201ENST00000315994 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.47■□□□□ 0.07
SH3PXD2A-201ENST00000315994 ATP7AQ04656 1500 aa15.47■□□□□ 0.07
SH3PXD2A-201ENST00000315994 TTC21AQ8NDW8 1320 aa15.46■□□□□ 0.07
SH3PXD2A-201ENST00000315994 MCM2P49736 904 aa15.46■□□□□ 0.07
SH3PXD2A-201ENST00000315994 RABEP1Q15276 862 aa15.46■□□□□ 0.07
SH3PXD2A-201ENST00000315994 SRGAP3O43295 1099 aa15.46■□□□□ 0.07
SH3PXD2A-201ENST00000315994 USHBP1Q8N6Y0 703 aa15.46■□□□□ 0.07
SH3PXD2A-201ENST00000315994 SSH1Q8WYL5 1049 aa15.45■□□□□ 0.06
SH3PXD2A-201ENST00000315994 PKNOX2Q96KN3 472 aa15.45■□□□□ 0.06
SH3PXD2A-201ENST00000315994 DMRT2Q9Y5R5 561 aa15.45■□□□□ 0.06
SH3PXD2A-201ENST00000315994 GOLGA6L19H0YKK7 550 aa15.45■□□□□ 0.06
SH3PXD2A-201ENST00000315994 RAD21O60216 631 aa15.45■□□□□ 0.06
SH3PXD2A-201ENST00000315994 PPIP5K1Q6PFW1 1433 aa15.45■□□□□ 0.06
SH3PXD2A-201ENST00000315994 CCDC57Q2TAC2 916 aa15.45■□□□□ 0.06
SH3PXD2A-201ENST00000315994 SIL1Q9H173 461 aa15.45■□□□□ 0.06
SH3PXD2A-201ENST00000315994 GNL3LQ9NVN8 582 aaKnown RBP15.45■□□□□ 0.06
SH3PXD2A-201ENST00000315994 CREBRFQ8IUR6 639 aa15.44■□□□□ 0.06
SH3PXD2A-201ENST00000315994 DHX16O60231 1041 aaKnown RBP15.44■□□□□ 0.06
SH3PXD2A-201ENST00000315994 STARD3NLO95772 234 aa15.44■□□□□ 0.06
SH3PXD2A-201ENST00000315994 CADPS2Q86UW7 1296 aa15.44■□□□□ 0.06
SH3PXD2A-201ENST00000315994 BECN2A8MW95 431 aa15.44■□□□□ 0.06
SH3PXD2A-201ENST00000315994 SAFBQ15424 915 aaKnown RBP eCLIP15.44■□□□□ 0.06
SH3PXD2A-201ENST00000315994 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.44■□□□□ 0.06
SH3PXD2A-201ENST00000315994 TPD52L1Q16890 204 aaPredicted RBP15.43■□□□□ 0.06
SH3PXD2A-201ENST00000315994 BICD2Q8TD16 824 aa15.43■□□□□ 0.06
SH3PXD2A-201ENST00000315994 BACH2Q9BYV9 841 aa15.43■□□□□ 0.06
SH3PXD2A-201ENST00000315994 TMOD3Q9NYL9 352 aa15.43■□□□□ 0.06
SH3PXD2A-201ENST00000315994 TCEAL9Q9UHQ7 104 aa15.43■□□□□ 0.06
SH3PXD2A-201ENST00000315994 IL16Q14005 1332 aa15.42■□□□□ 0.06
SH3PXD2A-201ENST00000315994 FYB1O15117 783 aa15.42■□□□□ 0.06
SH3PXD2A-201ENST00000315994 AMER1Q5JTC6 1135 aaPredicted RBP15.42■□□□□ 0.06
SH3PXD2A-201ENST00000315994 NEK4P51957 841 aa15.42■□□□□ 0.06
SH3PXD2A-201ENST00000315994 SART3Q15020 963 aaKnown RBP15.42■□□□□ 0.06
SH3PXD2A-201ENST00000315994 AACSQ86V21 672 aa15.41■□□□□ 0.06
SH3PXD2A-201ENST00000315994 HOOK1Q9UJC3 728 aaKnown RBP15.41■□□□□ 0.06
SH3PXD2A-201ENST00000315994 ZMYM3Q14202 1370 aa15.41■□□□□ 0.06
SH3PXD2A-201ENST00000315994 LARP1Q6PKG0 1096 aaKnown RBP15.41■□□□□ 0.06
SH3PXD2A-201ENST00000315994 ATP10AO60312 1499 aa15.41■□□□□ 0.06
SH3PXD2A-201ENST00000315994 MPHOSPH8Q99549 860 aa15.4■□□□□ 0.06
SH3PXD2A-201ENST00000315994 HMGB2P26583 209 aaKnown RBP15.4■□□□□ 0.06
SH3PXD2A-201ENST00000315994 PARD3Q8TEW0 1356 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms