RNA–Protein interactions for RNA: ENST00000311873.9

ZC3HC1-201, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 2 BASIC

Gene ZC3HC1, Length 2,017 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-201ENST00000311873 FLT4P35916 1363 aa15.51■□□□□ 0.07
ZC3HC1-201ENST00000311873 COL18A1P39060 1754 aa15.5■□□□□ 0.07
ZC3HC1-201ENST00000311873 LTV1Q96GA3 475 aaPredicted RBP15.5■□□□□ 0.07
ZC3HC1-201ENST00000311873 EIF4A2Q14240 407 aaKnown RBP15.5■□□□□ 0.07
ZC3HC1-201ENST00000311873 INSRP06213 1382 aa15.49■□□□□ 0.07
ZC3HC1-201ENST00000311873 ADAMTS2O95450 1211 aa15.49■□□□□ 0.07
ZC3HC1-201ENST00000311873 CFAP53Q96M91 514 aa15.49■□□□□ 0.07
ZC3HC1-201ENST00000311873 CPDO75976 1380 aa15.48■□□□□ 0.07
ZC3HC1-201ENST00000311873 JCADQ9P266 1359 aa15.48■□□□□ 0.07
ZC3HC1-201ENST00000311873 IL13P35225 146 aa15.48■□□□□ 0.07
ZC3HC1-201ENST00000311873 IP6K1Q92551 441 aa15.48■□□□□ 0.07
ZC3HC1-201ENST00000311873 ADAMTS8Q9UP79 889 aa15.48■□□□□ 0.07
ZC3HC1-201ENST00000311873 FAM83GA6ND36 823 aa15.48■□□□□ 0.07
ZC3HC1-201ENST00000311873 DIAPH1O60610 1272 aaKnown RBP15.48■□□□□ 0.07
ZC3HC1-201ENST00000311873 PRDM11Q9NQV5 511 aa15.48■□□□□ 0.07
ZC3HC1-201ENST00000311873 LRP6O75581 1613 aa15.47■□□□□ 0.07
ZC3HC1-201ENST00000311873 RGPD2P0DJD1 1756 aa15.47■□□□□ 0.07
ZC3HC1-201ENST00000311873 U2SURPO15042 1029 aaKnown RBP15.47■□□□□ 0.07
ZC3HC1-201ENST00000311873 YTHDC1Q96MU7 727 aaKnown RBP15.47■□□□□ 0.07
ZC3HC1-201ENST00000311873 CAMTA1Q9Y6Y1 1673 aa15.47■□□□□ 0.07
ZC3HC1-201ENST00000311873 RTL1A6NKG5 1358 aa15.47■□□□□ 0.07
ZC3HC1-201ENST00000311873 LMO7Q8WWI1 1683 aa15.46■□□□□ 0.07
ZC3HC1-201ENST00000311873 KIF24Q5T7B8 1368 aa15.45■□□□□ 0.06
ZC3HC1-201ENST00000311873 RGPD1P0DJD0 1748 aa15.45■□□□□ 0.06
ZC3HC1-201ENST00000311873 HMOX1P09601 288 aa15.44■□□□□ 0.06
ZC3HC1-201ENST00000311873 U2AF1L5P0DN76 240 aaPredicted RBP15.44■□□□□ 0.06
ZC3HC1-201ENST00000311873 U2AF1Q01081 240 aaKnown RBP eCLIP15.44■□□□□ 0.06
ZC3HC1-201ENST00000311873 WDR43Q15061 677 aaKnown RBP eCLIP15.44■□□□□ 0.06
ZC3HC1-201ENST00000311873 AEBP1Q8IUX7 1158 aa15.44■□□□□ 0.06
ZC3HC1-201ENST00000311873 CCDC146Q8IYE0 955 aa15.44■□□□□ 0.06
ZC3HC1-201ENST00000311873 USHBP1Q8N6Y0 703 aa15.44■□□□□ 0.06
ZC3HC1-201ENST00000311873 ANKRD24Q8TF21 1146 aa15.43■□□□□ 0.06
ZC3HC1-201ENST00000311873 EYA1Q99502 592 aa15.43■□□□□ 0.06
ZC3HC1-201ENST00000311873 BLMP54132 1417 aaPredicted RBP15.42■□□□□ 0.06
ZC3HC1-201ENST00000311873 NBPF6Q5VWK0 638 aa15.42■□□□□ 0.06
ZC3HC1-201ENST00000311873 FBXO41Q8TF61 875 aa15.42■□□□□ 0.06
ZC3HC1-201ENST00000311873 NBPF4Q96M43 638 aa15.42■□□□□ 0.06
ZC3HC1-201ENST00000311873 ERBB3P21860 1342 aa15.42■□□□□ 0.06
ZC3HC1-201ENST00000311873 PLCH1Q4KWH8 1693 aa15.41■□□□□ 0.06
ZC3HC1-201ENST00000311873 COL5A2P05997 1499 aaPredicted RBP15.41■□□□□ 0.06
ZC3HC1-201ENST00000311873 BTG4Q9NY30 223 aa15.41■□□□□ 0.06
ZC3HC1-201ENST00000311873 COL14A1Q05707 1796 aaKnown RBP15.4■□□□□ 0.06
ZC3HC1-201ENST00000311873 STRN4Q9NRL3 753 aa15.4■□□□□ 0.06
ZC3HC1-201ENST00000311873 NUDCQ9Y266 331 aa15.4■□□□□ 0.06
ZC3HC1-201ENST00000311873 SULT6B1Q6IMI4 303 aa15.39■□□□□ 0.05
ZC3HC1-201ENST00000311873 ABCC6O95255 1503 aa15.39■□□□□ 0.05
ZC3HC1-201ENST00000311873 SPATA31A6Q5VVP1 1343 aa15.39■□□□□ 0.05
ZC3HC1-201ENST00000311873 IGSF1Q8N6C5 1336 aa15.39■□□□□ 0.05
ZC3HC1-201ENST00000311873 C8orf37Q96NL8 207 aa15.39■□□□□ 0.05
ZC3HC1-201ENST00000311873 RSPH6AQ9H0K4 717 aa15.39■□□□□ 0.05
ZC3HC1-201ENST00000311873 LARP1Q6PKG0 1096 aaKnown RBP15.38■□□□□ 0.05
ZC3HC1-201ENST00000311873 CSB-PGBD3P0DP91 1061 aa15.38■□□□□ 0.05
ZC3HC1-201ENST00000311873 GTF3C3Q9Y5Q9 886 aa15.38■□□□□ 0.05
ZC3HC1-201ENST00000311873 PRKAR2BP31323 418 aa15.37■□□□□ 0.05
ZC3HC1-201ENST00000311873 PLEKHF1Q96S99 279 aa15.37■□□□□ 0.05
ZC3HC1-201ENST00000311873 NLRP2Q9NX02 1062 aa15.37■□□□□ 0.05
ZC3HC1-201ENST00000311873 NRAPQ86VF7 1730 aa15.37■□□□□ 0.05
ZC3HC1-201ENST00000311873 PHACTR3Q96KR7 559 aa15.36■□□□□ 0.05
ZC3HC1-201ENST00000311873 SALL2Q9Y467 1007 aaPredicted RBP15.36■□□□□ 0.05
ZC3HC1-201ENST00000311873 FAM208AQ9UK61 1670 aaKnown RBP15.36■□□□□ 0.05
ZC3HC1-201ENST00000311873 HNRNPUQ00839 825 aaKnown RBP eCLIP15.36■□□□□ 0.05
ZC3HC1-201ENST00000311873 WDR17Q8IZU2 1322 aa15.35■□□□□ 0.05
ZC3HC1-201ENST00000311873 RRP7AQ9Y3A4 280 aaKnown RBP15.35■□□□□ 0.05
ZC3HC1-201ENST00000311873 SLIT2O94813 1529 aa15.35■□□□□ 0.05
ZC3HC1-201ENST00000311873 KDRP35968 1356 aa15.35■□□□□ 0.05
ZC3HC1-201ENST00000311873 USP35Q9P2H5 1018 aa15.34■□□□□ 0.05
ZC3HC1-201ENST00000311873 APAF1O14727 1248 aa15.34■□□□□ 0.05
ZC3HC1-201ENST00000311873 EVA1CP58658 441 aa15.34■□□□□ 0.05
ZC3HC1-201ENST00000311873 NGLY1Q96IV0 654 aa15.34■□□□□ 0.05
ZC3HC1-201ENST00000311873 NCAPD2Q15021 1401 aa15.33■□□□□ 0.05
ZC3HC1-201ENST00000311873 FCHSD2O94868 740 aa15.33■□□□□ 0.04
ZC3HC1-201ENST00000311873 TOM1L2Q6ZVM7 507 aa15.33■□□□□ 0.04
ZC3HC1-201ENST00000311873 BCL9LQ86UU0 1499 aa15.33■□□□□ 0.04
ZC3HC1-201ENST00000311873 MEX3CQ5U5Q3 659 aaKnown RBP15.33■□□□□ 0.04
ZC3HC1-201ENST00000311873 NWD2Q9ULI1 1742 aa15.32■□□□□ 0.04
ZC3HC1-201ENST00000311873 RUNDC1Q96C34 613 aa15.32■□□□□ 0.04
ZC3HC1-201ENST00000311873 MEGF6O75095 1541 aa15.31■□□□□ 0.04
ZC3HC1-201ENST00000311873 NEUROD2Q15784 382 aa15.31■□□□□ 0.04
ZC3HC1-201ENST00000311873 TCP11L2Q8N4U5 519 aa15.31■□□□□ 0.04
ZC3HC1-201ENST00000311873 CRB1P82279 1406 aa15.3■□□□□ 0.04
ZC3HC1-201ENST00000311873 FNBP4Q8N3X1 1017 aaPredicted RBP15.3■□□□□ 0.04
ZC3HC1-201ENST00000311873 AFF2P51816 1311 aa15.29■□□□□ 0.04
ZC3HC1-201ENST00000311873 CARD10Q9BWT7 1032 aa15.29■□□□□ 0.04
ZC3HC1-201ENST00000311873 MAPK8IP3Q9UPT6 1336 aa15.29■□□□□ 0.04
ZC3HC1-201ENST00000311873 MTHFSDQ2M296 383 aaKnown RBP15.28■□□□□ 0.04
ZC3HC1-201ENST00000311873 UNC5CLQ8IV45 518 aa15.28■□□□□ 0.04
ZC3HC1-201ENST00000311873 USP21Q9UK80 565 aa15.28■□□□□ 0.04
ZC3HC1-201ENST00000311873 DLG5Q8TDM6 1919 aa15.27■□□□□ 0.04
ZC3HC1-201ENST00000311873 TMPOP42166 694 aaKnown RBP15.27■□□□□ 0.03
ZC3HC1-201ENST00000311873 CCDC9Q9Y3X0 531 aaKnown RBP15.26■□□□□ 0.03
ZC3HC1-201ENST00000311873 SPATA31A1Q5TZJ5 1347 aa15.26■□□□□ 0.03
ZC3HC1-201ENST00000311873 SPATA31A5Q5VU36 1347 aa15.25■□□□□ 0.03
ZC3HC1-201ENST00000311873 SPATA31A7Q8IWB4 1347 aa15.25■□□□□ 0.03
ZC3HC1-201ENST00000311873 ILDR1Q86SU0 546 aaPredicted RBP15.25■□□□□ 0.03
ZC3HC1-201ENST00000311873 NFE2L2Q16236 605 aa15.24■□□□□ 0.03
ZC3HC1-201ENST00000311873 RAPGEF4Q8WZA2 1011 aa15.24■□□□□ 0.03
ZC3HC1-201ENST00000311873 THUMPD2Q9BTF0 503 aaKnown RBP15.24■□□□□ 0.03
ZC3HC1-201ENST00000311873 TRIM35Q9UPQ4 493 aa15.24■□□□□ 0.03
ZC3HC1-201ENST00000311873 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.24■□□□□ 0.03
ZC3HC1-201ENST00000311873 WNK3Q9BYP7 1800 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms