RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 TTC21AQ8NDW8 1320 aa3.8□□□□□ -1.8
CLOCK-201ENST00000309964 SMARCE1Q969G3 411 aa3.8□□□□□ -1.8
CLOCK-201ENST00000309964 KIF4AO95239 1232 aa3.8□□□□□ -1.8
CLOCK-201ENST00000309964 NCBP3Q53F19 620 aaKnown RBP3.8□□□□□ -1.8
CLOCK-201ENST00000309964 SASS6Q6UVJ0 657 aa3.8□□□□□ -1.8
CLOCK-201ENST00000309964 SMARCC1Q92922 1105 aaPredicted RBP3.8□□□□□ -1.8
CLOCK-201ENST00000309964 CCDC27Q2M243 656 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 FILIP1LQ4L180 1135 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 LARP1Q6PKG0 1096 aaKnown RBP3.79□□□□□ -1.8
CLOCK-201ENST00000309964 CFAP45Q9UL16 551 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 HDGFL1Q5TGJ6 251 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 PPP4R3AQ6IN85 833 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 PRAM1Q96QH2 718 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 GNAT3A8MTJ3 354 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 EXOC5O00471 708 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 SETQ01105 290 aaPredicted RBP3.79□□□□□ -1.8
CLOCK-201ENST00000309964 TMOD3Q9NYL9 352 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 SMC3Q9UQE7 1217 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 RAD21O60216 631 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 RAB11FIP3O75154 756 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 CEP126Q9P2H0 1117 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 CCDC178Q5BJE1 867 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 LDHCP07864 332 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 ZNF396Q96N95 335 aaPredicted RBP3.79□□□□□ -1.8
CLOCK-201ENST00000309964 NEUROD6Q96NK8 337 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 PPP1R1BQ9UD71 204 aaPredicted RBP3.79□□□□□ -1.8
CLOCK-201ENST00000309964 CEP131Q9UPN4 1083 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 UHRF1BP1LA0JNW5 1464 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 POTEJP0CG39 1038 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 NBPF8Q3BBV2 869 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 NBPF14Q5TI25 921 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 ERCC4Q92889 916 aaPredicted RBP3.79□□□□□ -1.8
CLOCK-201ENST00000309964 CDC5LQ99459 802 aaKnown RBP3.79□□□□□ -1.8
CLOCK-201ENST00000309964 ADGBQ8N7X0 1667 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 CAMSAP2Q08AD1 1489 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 MBD3O95983 291 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 SOGA3Q5TF21 947 aa3.79□□□□□ -1.8
CLOCK-201ENST00000309964 HMGB1P1B2RPK0 211 aaPredicted RBP3.78□□□□□ -1.8
CLOCK-201ENST00000309964 DCTN1Q14203 1278 aa3.78□□□□□ -1.8
CLOCK-201ENST00000309964 CCDC12Q8WUD4 166 aaPredicted RBP3.78□□□□□ -1.8
CLOCK-201ENST00000309964 RNF41Q9H4P4 317 aaPredicted RBP3.78□□□□□ -1.8
CLOCK-201ENST00000309964 DHX29Q7Z478 1369 aaKnown RBP3.78□□□□□ -1.8
CLOCK-201ENST00000309964 GOLGA6L3A6NEY3 463 aa3.78□□□□□ -1.8
CLOCK-201ENST00000309964 CETN2P41208 172 aa3.78□□□□□ -1.8
CLOCK-201ENST00000309964 SPTY2D1Q68D10 685 aaPredicted RBP3.78□□□□□ -1.8
CLOCK-201ENST00000309964 NOL7Q9UMY1 257 aaKnown RBP3.78□□□□□ -1.8
CLOCK-201ENST00000309964 BAG3O95817 575 aa3.78□□□□□ -1.8
CLOCK-201ENST00000309964 TTF1Q15361 905 aaPredicted RBP3.78□□□□□ -1.8
CLOCK-201ENST00000309964 MCTP1Q6DN14 999 aa3.78□□□□□ -1.8
CLOCK-201ENST00000309964 AEBP1Q8IUX7 1158 aa3.78□□□□□ -1.8
CLOCK-201ENST00000309964 HOOK2Q96ED9 719 aa3.78□□□□□ -1.8
CLOCK-201ENST00000309964 HYPKQ9NX55 129 aa3.78□□□□□ -1.8
CLOCK-201ENST00000309964 BTBD11A6QL63 1104 aa3.78□□□□□ -1.8
CLOCK-201ENST00000309964 IFIT1P09914 478 aaKnown RBP3.78□□□□□ -1.8
CLOCK-201ENST00000309964 TNNT3P45378 269 aaPredicted RBP3.78□□□□□ -1.8
CLOCK-201ENST00000309964 PCMTD1Q96MG8 357 aaPredicted RBP3.78□□□□□ -1.8
CLOCK-201ENST00000309964 PPP1R42Q7Z4L9 355 aa3.78□□□□□ -1.8
CLOCK-201ENST00000309964 OGFOD1Q8N543 542 aa3.78□□□□□ -1.8
CLOCK-201ENST00000309964 STRN4Q9NRL3 753 aa3.78□□□□□ -1.8
CLOCK-201ENST00000309964 WDR7Q9Y4E6 1490 aa3.78□□□□□ -1.8
CLOCK-201ENST00000309964 KINO60870 393 aaKnown RBP3.78□□□□□ -1.8
CLOCK-201ENST00000309964 NUTM2DQ5VT03 806 aaPredicted RBP3.78□□□□□ -1.8
CLOCK-201ENST00000309964 USP37Q86T82 979 aa3.78□□□□□ -1.8
CLOCK-201ENST00000309964 RPAP2Q8IXW5 612 aaPredicted RBP3.78□□□□□ -1.8
CLOCK-201ENST00000309964 FBXW7Q969H0 707 aa3.78□□□□□ -1.8
CLOCK-201ENST00000309964 FEZ1Q99689 392 aa3.78□□□□□ -1.8
CLOCK-201ENST00000309964 NYXQ9GZU5 481 aa3.78□□□□□ -1.8
CLOCK-201ENST00000309964 ZNHIT6Q9NWK9 470 aaKnown RBP3.78□□□□□ -1.8
CLOCK-201ENST00000309964 U3KPZ7 1027 aaPredicted RBP3.78□□□□□ -1.8
CLOCK-201ENST00000309964 NCOA1Q15788 1441 aa3.78□□□□□ -1.8
CLOCK-201ENST00000309964 IQCA1Q86XH1 822 aa3.78□□□□□ -1.8
CLOCK-201ENST00000309964 FMNL3Q8IVF7 1028 aa3.78□□□□□ -1.8
CLOCK-201ENST00000309964 TNPO1Q92973 898 aaKnown RBP3.78□□□□□ -1.8
CLOCK-201ENST00000309964 TRPM2O94759 1503 aa3.78□□□□□ -1.8
CLOCK-201ENST00000309964 ERLIN2O94905 339 aa3.78□□□□□ -1.8
CLOCK-201ENST00000309964 FGFR1OPO95684 399 aaKnown RBP3.78□□□□□ -1.8
CLOCK-201ENST00000309964 IRX6P78412 446 aaPredicted RBP3.78□□□□□ -1.8
CLOCK-201ENST00000309964 CAVIN1Q6NZI2 390 aaKnown RBP3.78□□□□□ -1.8
CLOCK-201ENST00000309964 NF2P35240 595 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 KLHL34Q8N239 644 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 RUFY1Q96T51 708 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 ARGLU1Q9NWB6 273 aaPredicted RBP3.77□□□□□ -1.81
CLOCK-201ENST00000309964 MAGEC2Q9UBF1 373 aaPredicted RBP3.77□□□□□ -1.81
CLOCK-201ENST00000309964 ARHGEF11O15085 1522 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 PTPRCP08575 1304 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 IQCEQ6IPM2 695 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 MTERF4Q7Z6M4 381 aaKnown RBP3.77□□□□□ -1.81
CLOCK-201ENST00000309964 CCDC150Q8NCX0 1101 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 CLUAP1Q96AJ1 413 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 AK7Q96M32 723 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 PHAXQ9H814 394 aaKnown RBP3.77□□□□□ -1.81
CLOCK-201ENST00000309964 NUP160Q12769 1436 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 ST5P78524 1137 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 PAF1Q8N7H5 531 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 FERMT1Q9BQL6 677 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 PCF11O94913 1555 aaKnown RBP3.77□□□□□ -1.81
CLOCK-201ENST00000309964 CREBRFQ8IUR6 639 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 RPGRQ92834 1020 aaKnown RBP3.77□□□□□ -1.81
CLOCK-201ENST00000309964 PKNOX2Q96KN3 472 aa3.77□□□□□ -1.81
CLOCK-201ENST00000309964 GTPBP4Q9BZE4 634 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms