RNA–Protein interactions for RNA: ENST00000307616.1

C11orf40-201, Transcript of chromosome 11 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf40, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf40-201ENST00000307616 UBTFP17480 764 aaKnown RBP11.23□□□□□ -0.61
C11orf40-201ENST00000307616 CTC1Q2NKJ3 1217 aa11.23□□□□□ -0.61
C11orf40-201ENST00000307616 CRIPAKQ8N1N5 446 aa11.23□□□□□ -0.61
C11orf40-201ENST00000307616 SMCPP49901 116 aaPredicted RBP11.22□□□□□ -0.61
C11orf40-201ENST00000307616 NBPF20Q3BBV1 942 aa11.21□□□□□ -0.61
C11orf40-201ENST00000307616 WDR4P57081 412 aaKnown RBP11.2□□□□□ -0.62
C11orf40-201ENST00000307616 VAC14Q08AM6 782 aa11.2□□□□□ -0.62
C11orf40-201ENST00000307616 DACH1Q9UI36 760 aa11.2□□□□□ -0.62
C11orf40-201ENST00000307616 ZNF330Q9Y3S2 320 aaPredicted RBP11.2□□□□□ -0.62
C11orf40-201ENST00000307616 CAPN5O15484 640 aaPredicted RBP11.19□□□□□ -0.62
C11orf40-201ENST00000307616 RAD21O60216 631 aa11.19□□□□□ -0.62
C11orf40-201ENST00000307616 TIMP2P16035 220 aa11.19□□□□□ -0.62
C11orf40-201ENST00000307616 RAB15P59190 212 aa11.19□□□□□ -0.62
C11orf40-201ENST00000307616 INTS6LQ5JSJ4 861 aaKnown RBP11.19□□□□□ -0.62
C11orf40-201ENST00000307616 CCDC116Q8IYX3 515 aa11.19□□□□□ -0.62
C11orf40-201ENST00000307616 KLF16Q9BXK1 252 aaPredicted RBP11.19□□□□□ -0.62
C11orf40-201ENST00000307616 ZIC2O95409 532 aaPredicted RBP11.17□□□□□ -0.62
C11orf40-201ENST00000307616 ITPKCQ96DU7 683 aa11.17□□□□□ -0.62
C11orf40-201ENST00000307616 ZFAND3Q9H8U3 227 aa11.17□□□□□ -0.62
C11orf40-201ENST00000307616 GIGYF1O75420 1035 aaPredicted RBP11.16□□□□□ -0.62
C11orf40-201ENST00000307616 PPP1R26Q5T8A7 1209 aaPredicted RBP11.16□□□□□ -0.62
C11orf40-201ENST00000307616 CLUAP1Q96AJ1 413 aa11.16□□□□□ -0.62
C11orf40-201ENST00000307616 ESPNB1AK53 854 aa11.15□□□□□ -0.62
C11orf40-201ENST00000307616 WASHC4Q2M389 1173 aa11.15□□□□□ -0.62
C11orf40-201ENST00000307616 EMILIN1Q9Y6C2 1016 aa11.15□□□□□ -0.62
C11orf40-201ENST00000307616 MCCD1P59942 119 aaPredicted RBP11.14□□□□□ -0.63
C11orf40-201ENST00000307616 EIF4G2P78344 907 aaKnown RBP eCLIP11.14□□□□□ -0.63
C11orf40-201ENST00000307616 DHX9Q08211 1270 aaKnown RBP11.14□□□□□ -0.63
C11orf40-201ENST00000307616 BMP1P13497 986 aa11.13□□□□□ -0.63
C11orf40-201ENST00000307616 WWC1Q8IX03 1113 aa11.13□□□□□ -0.63
C11orf40-201ENST00000307616 ZNF592Q92610 1267 aa11.13□□□□□ -0.63
C11orf40-201ENST00000307616 ATP13A2Q9NQ11 1180 aa11.13□□□□□ -0.63
C11orf40-201ENST00000307616 ERVH48-1M5A8F1 160 aa11.12□□□□□ -0.63
C11orf40-201ENST00000307616 TMPRSS4Q9NRS4 437 aa11.12□□□□□ -0.63
C11orf40-201ENST00000307616 PGPEP1Q9NXJ5 209 aa11.12□□□□□ -0.63
C11orf40-201ENST00000307616 SEPT12Q8IYM1 358 aa11.11□□□□□ -0.63
C11orf40-201ENST00000307616 GTF3C3Q9Y5Q9 886 aa11.11□□□□□ -0.63
C11orf40-201ENST00000307616 POTECB2RU33 542 aa11.1□□□□□ -0.63
C11orf40-201ENST00000307616 CEP126Q9P2H0 1117 aa11.1□□□□□ -0.63
C11orf40-201ENST00000307616 GMPR2Q9P2T1 348 aaKnown RBP11.1□□□□□ -0.63
C11orf40-201ENST00000307616 TRIM46Q7Z4K8 759 aa11.09□□□□□ -0.63
C11orf40-201ENST00000307616 CBLBQ13191 982 aa11.08□□□□□ -0.64
C11orf40-201ENST00000307616 RNF20Q5VTR2 975 aa11.08□□□□□ -0.64
C11orf40-201ENST00000307616 ZNF784Q8NCA9 323 aaPredicted RBP11.08□□□□□ -0.64
C11orf40-201ENST00000307616 SEMA3FQ13275 785 aa11.07□□□□□ -0.64
C11orf40-201ENST00000307616 ZNF787Q6DD87 383 aa11.07□□□□□ -0.64
C11orf40-201ENST00000307616 MRPL14Q6P1L8 145 aaKnown RBP11.07□□□□□ -0.64
C11orf40-201ENST00000307616 PROSER2Q86WR7 435 aaPredicted RBP11.07□□□□□ -0.64
C11orf40-201ENST00000307616 POM121CA8CG34 1229 aa11.06□□□□□ -0.64
C11orf40-201ENST00000307616 MEIOBQ8N635 442 aa11.06□□□□□ -0.64
C11orf40-201ENST00000307616 SOX11P35716 441 aa11.05□□□□□ -0.64
C11orf40-201ENST00000307616 FNBP4Q8N3X1 1017 aaPredicted RBP11.05□□□□□ -0.64
C11orf40-201ENST00000307616 CYLDQ9NQC7 956 aa11.05□□□□□ -0.64
C11orf40-201ENST00000307616 Q6ZVU0 165 aa11.04□□□□□ -0.64
C11orf40-201ENST00000307616 ZFP42Q96MM3 310 aa11.04□□□□□ -0.64
C11orf40-201ENST00000307616 PURBQ96QR8 312 aaKnown RBP11.04□□□□□ -0.64
C11orf40-201ENST00000307616 PCDHB11Q9Y5F2 797 aa11.04□□□□□ -0.64
C11orf40-201ENST00000307616 A6NJR5 290 aa11.03□□□□□ -0.64
C11orf40-201ENST00000307616 LILRA1O75019 489 aa11.03□□□□□ -0.64
C11orf40-201ENST00000307616 SLFNL1Q499Z3 407 aa11.03□□□□□ -0.64
C11orf40-201ENST00000307616 C6orf118Q5T5N4 469 aa11.03□□□□□ -0.64
C11orf40-201ENST00000307616 LINC00528Q8N1L1 170 aa11.03□□□□□ -0.64
C11orf40-201ENST00000307616 CCDC85AQ96PX6 553 aaPredicted RBP11.03□□□□□ -0.64
C11orf40-201ENST00000307616 C11orf95C9JLR9 678 aaPredicted RBP11.02□□□□□ -0.65
C11orf40-201ENST00000307616 ADD1P35611 737 aaKnown RBP11.02□□□□□ -0.65
C11orf40-201ENST00000307616 CCDC125Q86Z20 511 aa11.02□□□□□ -0.65
C11orf40-201ENST00000307616 RNF135Q8IUD6 432 aa11.02□□□□□ -0.65
C11orf40-201ENST00000307616 PHTF2Q8N3S3 785 aa11.02□□□□□ -0.65
C11orf40-201ENST00000307616 ALG2Q9H553 416 aa11.02□□□□□ -0.65
C11orf40-201ENST00000307616 SENP2Q9HC62 589 aa11.02□□□□□ -0.65
C11orf40-201ENST00000307616 UPP2O95045 317 aa11.01□□□□□ -0.65
C11orf40-201ENST00000307616 SCARF1Q14162 830 aa11.01□□□□□ -0.65
C11orf40-201ENST00000307616 TSGA10IPQ3SY00 556 aa11.01□□□□□ -0.65
C11orf40-201ENST00000307616 AGBL1Q96MI9 1066 aa11.01□□□□□ -0.65
C11orf40-201ENST00000307616 BMP2P12643 396 aa11□□□□□ -0.65
C11orf40-201ENST00000307616 SCTRP47872 440 aa11□□□□□ -0.65
C11orf40-201ENST00000307616 ADAMTS19Q8TE59 1207 aa11□□□□□ -0.65
C11orf40-201ENST00000307616 TRIM47Q96LD4 638 aa11□□□□□ -0.65
C11orf40-201ENST00000307616 TSEN34Q9BSV6 310 aaKnown RBP11□□□□□ -0.65
C11orf40-201ENST00000307616 CDCA7Q9BWT1 371 aaPredicted RBP11□□□□□ -0.65
C11orf40-201ENST00000307616 SNRPBP14678 240 aaKnown RBP10.99□□□□□ -0.65
C11orf40-201ENST00000307616 ERVK-9P63128 1117 aa10.99□□□□□ -0.65
C11orf40-201ENST00000307616 CC2D2BQ6DHV5 1058 aa10.99□□□□□ -0.65
C11orf40-201ENST00000307616 KIFC2Q96AC6 838 aa10.99□□□□□ -0.65
C11orf40-201ENST00000307616 PIK3CDO00329 1044 aa10.98□□□□□ -0.65
C11orf40-201ENST00000307616 RELBQ01201 579 aa10.98□□□□□ -0.65
C11orf40-201ENST00000307616 TRIM52Q96A61 297 aa10.98□□□□□ -0.65
C11orf40-201ENST00000307616 ADH1AP07327 375 aa10.97□□□□□ -0.65
C11orf40-201ENST00000307616 HDGFL1Q5TGJ6 251 aa10.97□□□□□ -0.65
C11orf40-201ENST00000307616 DOLKQ9UPQ8 538 aa10.97□□□□□ -0.65
C11orf40-201ENST00000307616 ZNF395Q9H8N7 513 aaPredicted RBP10.96□□□□□ -0.65
C11orf40-201ENST00000307616 KDF1Q8NAX2 398 aaPredicted RBP10.95□□□□□ -0.66
C11orf40-201ENST00000307616 PLPP7Q8NBV4 271 aa10.95□□□□□ -0.66
C11orf40-201ENST00000307616 ESF1Q9H501 851 aaKnown RBP10.95□□□□□ -0.66
C11orf40-201ENST00000307616 OXLD1Q5BKU9 147 aa10.94□□□□□ -0.66
C11orf40-201ENST00000307616 GLMNQ92990 594 aa10.94□□□□□ -0.66
C11orf40-201ENST00000307616 OSBPL3Q9H4L5 887 aa10.94□□□□□ -0.66
C11orf40-201ENST00000307616 CHIC2Q9UKJ5 165 aa10.94□□□□□ -0.66
C11orf40-201ENST00000307616 ATP5J2-PTCD1G3V325 749 aa10.93□□□□□ -0.66
C11orf40-201ENST00000307616 SPINT1O43278 529 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms