RNA–Protein interactions for RNA: ENST00000307296.7

PDCD6IP-201, Transcript of programmed cell death 6 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDCD6IP, Length 6,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6IP-201ENST00000307296 SEPT11Q9NVA2 429 aaKnown RBP10.55□□□□□ -0.72
PDCD6IP-201ENST00000307296 GNAI3P08754 354 aa10.55□□□□□ -0.72
PDCD6IP-201ENST00000307296 CERS3Q8IU89 383 aa10.55□□□□□ -0.72
PDCD6IP-201ENST00000307296 NINLQ9Y2I6 1382 aa10.55□□□□□ -0.72
PDCD6IP-201ENST00000307296 URI1O94763 535 aaPredicted RBP10.54□□□□□ -0.72
PDCD6IP-201ENST00000307296 CCDC192P0DO97 292 aa10.54□□□□□ -0.72
PDCD6IP-201ENST00000307296 WASHC4Q2M389 1173 aa10.54□□□□□ -0.72
PDCD6IP-201ENST00000307296 PUS7Q96PZ0 661 aaKnown RBP10.54□□□□□ -0.72
PDCD6IP-201ENST00000307296 ZNF396Q96N95 335 aaPredicted RBP10.54□□□□□ -0.72
PDCD6IP-201ENST00000307296 RUNDC1Q96C34 613 aa10.54□□□□□ -0.72
PDCD6IP-201ENST00000307296 RAI14Q9P0K7 980 aa10.54□□□□□ -0.72
PDCD6IP-201ENST00000307296 BCAR3O75815 825 aa10.54□□□□□ -0.72
PDCD6IP-201ENST00000307296 MAP2K1Q02750 393 aaPredicted RBP10.54□□□□□ -0.72
PDCD6IP-201ENST00000307296 WWC2Q6AWC2 1192 aa10.54□□□□□ -0.72
PDCD6IP-201ENST00000307296 TBC1D2BQ9UPU7 963 aa10.54□□□□□ -0.72
PDCD6IP-201ENST00000307296 TANGO6Q9C0B7 1094 aa10.54□□□□□ -0.72
PDCD6IP-201ENST00000307296 UBE4AQ14139 1066 aa10.53□□□□□ -0.72
PDCD6IP-201ENST00000307296 PPFIBP1Q86W92 1011 aa10.53□□□□□ -0.72
PDCD6IP-201ENST00000307296 TIGD1Q96MW7 591 aa10.53□□□□□ -0.72
PDCD6IP-201ENST00000307296 NEUROD6Q96NK8 337 aa10.53□□□□□ -0.72
PDCD6IP-201ENST00000307296 PPARDQ03181 441 aa10.53□□□□□ -0.72
PDCD6IP-201ENST00000307296 LARP6Q9BRS8 491 aaKnown RBP10.53□□□□□ -0.72
PDCD6IP-201ENST00000307296 PDIA4P13667 645 aaKnown RBP10.53□□□□□ -0.72
PDCD6IP-201ENST00000307296 GOPCQ9HD26 462 aa10.53□□□□□ -0.72
PDCD6IP-201ENST00000307296 CNTROBQ8N137 903 aa10.53□□□□□ -0.72
PDCD6IP-201ENST00000307296 USP25Q9UHP3 1055 aa10.53□□□□□ -0.72
PDCD6IP-201ENST00000307296 HMOX1P09601 288 aa10.53□□□□□ -0.72
PDCD6IP-201ENST00000307296 PANK2Q9BZ23 570 aa10.53□□□□□ -0.72
PDCD6IP-201ENST00000307296 RNF216Q9NWF9 866 aaPredicted RBP10.53□□□□□ -0.72
PDCD6IP-201ENST00000307296 DACH1Q9UI36 760 aa10.53□□□□□ -0.72
PDCD6IP-201ENST00000307296 ME1P48163 572 aa10.52□□□□□ -0.72
PDCD6IP-201ENST00000307296 RSPH14Q9UHP6 348 aa10.52□□□□□ -0.72
PDCD6IP-201ENST00000307296 UBTFL1P0CB47 393 aaPredicted RBP10.52□□□□□ -0.73
PDCD6IP-201ENST00000307296 CASQ1P31415 396 aa10.52□□□□□ -0.73
PDCD6IP-201ENST00000307296 CDK5RAP3Q96JB5 506 aa10.52□□□□□ -0.73
PDCD6IP-201ENST00000307296 STIM1Q13586 685 aa10.52□□□□□ -0.73
PDCD6IP-201ENST00000307296 SLC3A2P08195 630 aaKnown RBP10.52□□□□□ -0.73
PDCD6IP-201ENST00000307296 GBP2P32456 591 aaPredicted RBP10.52□□□□□ -0.73
PDCD6IP-201ENST00000307296 TMCO4Q5TGY1 634 aa10.52□□□□□ -0.73
PDCD6IP-201ENST00000307296 DDX54Q8TDD1 881 aaKnown RBP10.52□□□□□ -0.73
PDCD6IP-201ENST00000307296 RAPGEF4Q8WZA2 1011 aa10.52□□□□□ -0.73
PDCD6IP-201ENST00000307296 K7ELQ4 463 aaPredicted RBP10.52□□□□□ -0.73
PDCD6IP-201ENST00000307296 AIMP1Q12904 312 aaKnown RBP10.52□□□□□ -0.73
PDCD6IP-201ENST00000307296 STK38Q15208 465 aa10.52□□□□□ -0.73
PDCD6IP-201ENST00000307296 DNAAF4Q8WXU2 420 aa10.51□□□□□ -0.73
PDCD6IP-201ENST00000307296 PTPN14Q15678 1187 aa10.51□□□□□ -0.73
PDCD6IP-201ENST00000307296 C10orf67Q8IYJ2 551 aa10.51□□□□□ -0.73
PDCD6IP-201ENST00000307296 ZHX3Q9H4I2 956 aa10.51□□□□□ -0.73
PDCD6IP-201ENST00000307296 IQCEQ6IPM2 695 aa10.51□□□□□ -0.73
PDCD6IP-201ENST00000307296 PIBF1Q8WXW3 757 aa10.51□□□□□ -0.73
PDCD6IP-201ENST00000307296 GDPD2Q9HCC8 539 aa10.51□□□□□ -0.73
PDCD6IP-201ENST00000307296 SOGA1O94964 1423 aa10.51□□□□□ -0.73
PDCD6IP-201ENST00000307296 TSPYL4Q9UJ04 414 aa10.51□□□□□ -0.73
PDCD6IP-201ENST00000307296 FSD1Q9BTV5 496 aa10.5□□□□□ -0.73
PDCD6IP-201ENST00000307296 ARID4AP29374 1257 aaPredicted RBP10.5□□□□□ -0.73
PDCD6IP-201ENST00000307296 CCDC18Q5T9S5 1454 aa10.5□□□□□ -0.73
PDCD6IP-201ENST00000307296 CRACR2AQ9BSW2 395 aa10.5□□□□□ -0.73
PDCD6IP-201ENST00000307296 RIC3Q7Z5B4 369 aa10.5□□□□□ -0.73
PDCD6IP-201ENST00000307296 CPLX3Q8WVH0 158 aa10.5□□□□□ -0.73
PDCD6IP-201ENST00000307296 HNRNPMP52272 730 aaKnown RBP eCLIP10.5□□□□□ -0.731e-6■■□□□ 12
PDCD6IP-201ENST00000307296 MICALL1Q8N3F8 863 aa10.5□□□□□ -0.73
PDCD6IP-201ENST00000307296 KIAA1328Q86T90 577 aa10.49□□□□□ -0.73
PDCD6IP-201ENST00000307296 CEP63Q96MT8 703 aa10.49□□□□□ -0.73
PDCD6IP-201ENST00000307296 PEG3Q9GZU2 1588 aa10.49□□□□□ -0.73
PDCD6IP-201ENST00000307296 SSFA2P28290 1259 aa10.49□□□□□ -0.73
PDCD6IP-201ENST00000307296 KRT18P05783 430 aaKnown RBP10.49□□□□□ -0.73
PDCD6IP-201ENST00000307296 ANKRD1Q15327 319 aa10.49□□□□□ -0.73
PDCD6IP-201ENST00000307296 FERMT3Q86UX7 667 aa10.49□□□□□ -0.73
PDCD6IP-201ENST00000307296 ERC1Q8IUD2 1116 aa10.49□□□□□ -0.73
PDCD6IP-201ENST00000307296 USP47Q96K76 1375 aa10.49□□□□□ -0.73
PDCD6IP-201ENST00000307296 TMCO5BA8MYB1 307 aa10.48□□□□□ -0.73
PDCD6IP-201ENST00000307296 CBFA2T2O43439 604 aa10.48□□□□□ -0.73
PDCD6IP-201ENST00000307296 CCDC160A6NGH7 325 aa10.48□□□□□ -0.73
PDCD6IP-201ENST00000307296 IKQ13123 557 aaPredicted RBP10.48□□□□□ -0.73
PDCD6IP-201ENST00000307296 CEP57Q86XR8 500 aa10.48□□□□□ -0.73
PDCD6IP-201ENST00000307296 CKAP2LQ8IYA6 745 aa10.48□□□□□ -0.73
PDCD6IP-201ENST00000307296 TRIM22Q8IYM9 498 aa10.48□□□□□ -0.73
PDCD6IP-201ENST00000307296 TERF1P54274 439 aa10.48□□□□□ -0.73
PDCD6IP-201ENST00000307296 ISM2Q6H9L7 571 aa10.48□□□□□ -0.73
PDCD6IP-201ENST00000307296 DHX57Q6P158 1386 aaKnown RBP10.48□□□□□ -0.73
PDCD6IP-201ENST00000307296 DRC1Q96MC2 740 aa10.48□□□□□ -0.73
PDCD6IP-201ENST00000307296 DDX11Q96FC9 970 aa10.47□□□□□ -0.73
PDCD6IP-201ENST00000307296 TOP2AP11388 1531 aaKnown RBP10.47□□□□□ -0.73
PDCD6IP-201ENST00000307296 SSBP05455 408 aaKnown RBP eCLIP10.47□□□□□ -0.73
PDCD6IP-201ENST00000307296 MATR3P43243 847 aaKnown RBP eCLIP10.47□□□□□ -0.731e-6■■■□□ 19.1
PDCD6IP-201ENST00000307296 FAM160A1Q05DH4 1040 aa10.47□□□□□ -0.73
PDCD6IP-201ENST00000307296 SPATA32Q96LK8 384 aa10.47□□□□□ -0.73
PDCD6IP-201ENST00000307296 NUP62CLQ9H1M0 184 aa10.47□□□□□ -0.73
PDCD6IP-201ENST00000307296 CFAP100Q494V2 611 aa10.47□□□□□ -0.73
PDCD6IP-201ENST00000307296 CLIP2Q9UDT6 1046 aa10.47□□□□□ -0.73
PDCD6IP-201ENST00000307296 WDR33Q9C0J8 1336 aaKnown RBP10.47□□□□□ -0.73
PDCD6IP-201ENST00000307296 KIF2AO00139 706 aaPredicted RBP10.47□□□□□ -0.73
PDCD6IP-201ENST00000307296 DESP17661 470 aa10.47□□□□□ -0.73
PDCD6IP-201ENST00000307296 GBP3Q9H0R5 595 aa10.47□□□□□ -0.73
PDCD6IP-201ENST00000307296 SURF6O75683 361 aaKnown RBP10.47□□□□□ -0.73
PDCD6IP-201ENST00000307296 TDO2P48775 406 aa10.47□□□□□ -0.73
PDCD6IP-201ENST00000307296 KRT85P78386 507 aa10.47□□□□□ -0.73
PDCD6IP-201ENST00000307296 UPF3BQ9BZI7 483 aaKnown RBP10.47□□□□□ -0.73
PDCD6IP-201ENST00000307296 PPFIA3O75145 1194 aa10.46□□□□□ -0.73
PDCD6IP-201ENST00000307296 SSR1P43307 286 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms