RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 KIF1BO60333 1816 aa23.14■■□□□ 1.29
CHRNB1-201ENST00000306071 PLCH2O75038 1416 aa23.13■■□□□ 1.29
CHRNB1-201ENST00000306071 CHGAP10645 457 aaKnown RBP23.13■■□□□ 1.29
CHRNB1-201ENST00000306071 CFAP44Q96MT7 982 aa23.13■■□□□ 1.29
CHRNB1-201ENST00000306071 FOXD4L5Q5VV16 416 aaPredicted RBP23.13■■□□□ 1.29
CHRNB1-201ENST00000306071 FOXD4L4Q8WXT5 416 aaPredicted RBP23.13■■□□□ 1.29
CHRNB1-201ENST00000306071 NSFL1CQ9UNZ2 370 aaKnown RBP23.13■■□□□ 1.29
CHRNB1-201ENST00000306071 ZDHHC9Q9Y397 364 aa23.13■■□□□ 1.29
CHRNB1-201ENST00000306071 ABCC1P33527 1531 aa23.12■■□□□ 1.29
CHRNB1-201ENST00000306071 TMEM132EQ6IEE7 984 aa23.12■■□□□ 1.29
CHRNB1-201ENST00000306071 KIF3BO15066 747 aa23.11■■□□□ 1.29
CHRNB1-201ENST00000306071 DMTNQ08495 405 aa23.11■■□□□ 1.29
CHRNB1-201ENST00000306071 PLEKHM2Q8IWE5 1019 aa23.11■■□□□ 1.29
CHRNB1-201ENST00000306071 PPRC1Q5VV67 1664 aaKnown RBP23.11■■□□□ 1.29
CHRNB1-201ENST00000306071 ANKRD36BQ8N2N9 1353 aa23.1■■□□□ 1.29
CHRNB1-201ENST00000306071 MYRIPQ8NFW9 859 aa23.1■■□□□ 1.29
CHRNB1-201ENST00000306071 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.1■■□□□ 1.29
CHRNB1-201ENST00000306071 DEPDC5O75140 1603 aa23.1■■□□□ 1.29
CHRNB1-201ENST00000306071 INTS3Q68E01 1043 aaKnown RBP23.1■■□□□ 1.29
CHRNB1-201ENST00000306071 ZC3H13Q5T200 1668 aaKnown RBP23.1■■□□□ 1.29
CHRNB1-201ENST00000306071 REREQ9P2R6 1566 aa23.1■■□□□ 1.29
CHRNB1-201ENST00000306071 UTP14CQ5TAP6 766 aaKnown RBP23.09■■□□□ 1.29
CHRNB1-201ENST00000306071 MBD3O95983 291 aa23.09■■□□□ 1.29
CHRNB1-201ENST00000306071 IFT172Q9UG01 1749 aa23.09■■□□□ 1.29
CHRNB1-201ENST00000306071 TTC22Q5TAA0 569 aa23.08■■□□□ 1.29
CHRNB1-201ENST00000306071 INO80Q9ULG1 1556 aaPredicted RBP23.08■■□□□ 1.29
CHRNB1-201ENST00000306071 TSPY26PQ9H489 355 aa23.08■■□□□ 1.29
CHRNB1-201ENST00000306071 NRXN1Q9ULB1 1477 aa23.08■■□□□ 1.28
CHRNB1-201ENST00000306071 JARID2Q92833 1246 aaPredicted RBP23.07■■□□□ 1.28
CHRNB1-201ENST00000306071 ZNF428Q96B54 188 aa23.07■■□□□ 1.28
CHRNB1-201ENST00000306071 GGNBP2Q9H3C7 697 aa23.07■■□□□ 1.28
CHRNB1-201ENST00000306071 SETBP1Q9Y6X0 1596 aa23.07■■□□□ 1.28
CHRNB1-201ENST00000306071 BRPF1P55201 1214 aaPredicted RBP23.07■■□□□ 1.28
CHRNB1-201ENST00000306071 EVC2Q86UK5 1308 aa23.07■■□□□ 1.28
CHRNB1-201ENST00000306071 MRPL50Q8N5N7 158 aaKnown RBP23.06■■□□□ 1.28
CHRNB1-201ENST00000306071 ZSCAN20P17040 1043 aaPredicted RBP23.06■■□□□ 1.28
CHRNB1-201ENST00000306071 CASC1Q6TDU7 716 aa23.06■■□□□ 1.28
CHRNB1-201ENST00000306071 TSC1Q92574 1164 aa23.06■■□□□ 1.28
CHRNB1-201ENST00000306071 ARHGAP45Q92619 1136 aa23.06■■□□□ 1.28
CHRNB1-201ENST00000306071 MROH2AA6NES4 1674 aa23.06■■□□□ 1.28
CHRNB1-201ENST00000306071 ZFYVE16Q7Z3T8 1539 aa23.05■■□□□ 1.28
CHRNB1-201ENST00000306071 C16orf71Q8IYS4 520 aaPredicted RBP23.04■■□□□ 1.28
CHRNB1-201ENST00000306071 MPNDQ8N594 471 aa23.04■■□□□ 1.28
CHRNB1-201ENST00000306071 C14orf93Q9H972 538 aaKnown RBP23.04■■□□□ 1.28
CHRNB1-201ENST00000306071 CABP2Q9NPB3 220 aa23.04■■□□□ 1.28
CHRNB1-201ENST00000306071 ELL2O00472 640 aaPredicted RBP23.03■■□□□ 1.28
CHRNB1-201ENST00000306071 PRIMPOLQ96LW4 560 aa23.03■■□□□ 1.28
CHRNB1-201ENST00000306071 PIK3R4Q99570 1358 aa23.03■■□□□ 1.28
CHRNB1-201ENST00000306071 DIAPH1O60610 1272 aaKnown RBP23.03■■□□□ 1.28
CHRNB1-201ENST00000306071 HMGN5P82970 282 aaKnown RBP23.03■■□□□ 1.28
CHRNB1-201ENST00000306071 CBX1P83916 185 aa23.03■■□□□ 1.28
CHRNB1-201ENST00000306071 PTCH1Q13635 1447 aa23.02■■□□□ 1.28
CHRNB1-201ENST00000306071 VAMP4O75379 141 aa23.02■■□□□ 1.28
CHRNB1-201ENST00000306071 COL3A1P02461 1466 aaPredicted RBP23.02■■□□□ 1.28
CHRNB1-201ENST00000306071 VWDEQ8N2E2 1590 aa23.02■■□□□ 1.28
CHRNB1-201ENST00000306071 ZNF710Q8N1W2 664 aa23.01■■□□□ 1.27
CHRNB1-201ENST00000306071 SYAP1Q96A49 352 aaPredicted RBP23.01■■□□□ 1.27
CHRNB1-201ENST00000306071 ZNF830Q96NB3 372 aaPredicted RBP23.01■■□□□ 1.27
CHRNB1-201ENST00000306071 TSPYL6Q8N831 410 aa23■■□□□ 1.27
CHRNB1-201ENST00000306071 ABCC4O15439 1325 aa23■■□□□ 1.27
CHRNB1-201ENST00000306071 SDSP20132 328 aa22.99■■□□□ 1.27
CHRNB1-201ENST00000306071 NOLC1Q14978 699 aaKnown RBP eCLIP22.99■■□□□ 1.27
CHRNB1-201ENST00000306071 PIBF1Q8WXW3 757 aa22.99■■□□□ 1.27
CHRNB1-201ENST00000306071 REC8O95072 547 aa22.99■■□□□ 1.27
CHRNB1-201ENST00000306071 DCTPP1Q9H773 170 aa22.99■■□□□ 1.27
CHRNB1-201ENST00000306071 OTUD7AQ8TE49 926 aaPredicted RBP22.98■■□□□ 1.27
CHRNB1-201ENST00000306071 PPP4R3BQ5MIZ7 849 aa22.98■■□□□ 1.27
CHRNB1-201ENST00000306071 ATAD2Q6PL18 1390 aa22.98■■□□□ 1.27
CHRNB1-201ENST00000306071 SAFB2Q14151 953 aaKnown RBP eCLIP22.97■■□□□ 1.27
CHRNB1-201ENST00000306071 PUS7Q96PZ0 661 aaKnown RBP22.97■■□□□ 1.27
CHRNB1-201ENST00000306071 THUMPD2Q9BTF0 503 aaKnown RBP22.97■■□□□ 1.27
CHRNB1-201ENST00000306071 A0A1W2PP64 1363 aa22.97■■□□□ 1.27
CHRNB1-201ENST00000306071 APBB1O00213 710 aa22.96■■□□□ 1.27
CHRNB1-201ENST00000306071 PHF14O94880 888 aa22.96■■□□□ 1.27
CHRNB1-201ENST00000306071 KIF3AQ9Y496 699 aa22.96■■□□□ 1.27
CHRNB1-201ENST00000306071 ADGRB1O14514 1584 aa22.96■■□□□ 1.27
CHRNB1-201ENST00000306071 FAM177BA6PVY3 158 aa22.96■■□□□ 1.27
CHRNB1-201ENST00000306071 GTF2F1P35269 517 aaKnown RBP eCLIP22.96■■□□□ 1.27
CHRNB1-201ENST00000306071 NEK4P51957 841 aa22.96■■□□□ 1.27
CHRNB1-201ENST00000306071 GTPBP4Q9BZE4 634 aaKnown RBP22.96■■□□□ 1.27
CHRNB1-201ENST00000306071 PRKAR2BP31323 418 aa22.96■■□□□ 1.27
CHRNB1-201ENST00000306071 TMX3Q96JJ7 454 aa22.96■■□□□ 1.27
CHRNB1-201ENST00000306071 TULP4Q9NRJ4 1543 aa22.95■■□□□ 1.26
CHRNB1-201ENST00000306071 FCHSD2O94868 740 aa22.95■■□□□ 1.26
CHRNB1-201ENST00000306071 C17orf53Q8N3J3 647 aaPredicted RBP22.95■■□□□ 1.26
CHRNB1-201ENST00000306071 BRD1O95696 1058 aa22.95■■□□□ 1.26
CHRNB1-201ENST00000306071 FOXD4L6Q3SYB3 417 aaPredicted RBP22.95■■□□□ 1.26
CHRNB1-201ENST00000306071 FOXD4L3Q6VB84 417 aaPredicted RBP22.95■■□□□ 1.26
CHRNB1-201ENST00000306071 API5Q9BZZ5 524 aaKnown RBP22.95■■□□□ 1.26
CHRNB1-201ENST00000306071 TTC12Q9H892 705 aaPredicted RBP22.95■■□□□ 1.26
CHRNB1-201ENST00000306071 USP25Q9UHP3 1055 aa22.94■■□□□ 1.26
CHRNB1-201ENST00000306071 ERC2O15083 957 aa22.94■■□□□ 1.26
CHRNB1-201ENST00000306071 SRPK2P78362 688 aaKnown RBP22.93■■□□□ 1.26
CHRNB1-201ENST00000306071 ATP2B3Q16720 1220 aa22.93■■□□□ 1.26
CHRNB1-201ENST00000306071 FYB1O15117 783 aa22.93■■□□□ 1.26
CHRNB1-201ENST00000306071 SMARCA5O60264 1052 aaPredicted RBP22.93■■□□□ 1.26
CHRNB1-201ENST00000306071 TWISTNBQ3B726 338 aaPredicted RBP22.92■■□□□ 1.26
CHRNB1-201ENST00000306071 ADGRB3O60242 1522 aa22.92■■□□□ 1.26
CHRNB1-201ENST00000306071 ATP7AQ04656 1500 aa22.92■■□□□ 1.26
CHRNB1-201ENST00000306071 EFCAB6Q5THR3 1501 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms