RNA–Protein interactions for RNA: ENST00000298510.3

PRDX3-201, Transcript of peroxiredoxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDX3, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDX3-201ENST00000298510 CGNL1Q0VF96 1302 aa25.51■■□□□ 1.67
PRDX3-201ENST00000298510 ZEB1P37275 1124 aaPredicted RBP25.51■■□□□ 1.67
PRDX3-201ENST00000298510 LTN1O94822 1766 aa25.5■■□□□ 1.67
PRDX3-201ENST00000298510 LARP1Q6PKG0 1096 aaKnown RBP25.5■■□□□ 1.67
PRDX3-201ENST00000298510 COL5A2P05997 1499 aaPredicted RBP25.5■■□□□ 1.67
PRDX3-201ENST00000298510 RGPD5Q99666 1765 aa25.5■■□□□ 1.67
PRDX3-201ENST00000298510 SPATA31A5Q5VU36 1347 aa25.5■■□□□ 1.67
PRDX3-201ENST00000298510 SPATA31A7Q8IWB4 1347 aa25.5■■□□□ 1.67
PRDX3-201ENST00000298510 SOCS7O14512 581 aa25.48■■□□□ 1.67
PRDX3-201ENST00000298510 FAM98CQ17RN3 349 aaKnown RBP25.46■■□□□ 1.67
PRDX3-201ENST00000298510 USP35Q9P2H5 1018 aa25.46■■□□□ 1.67
PRDX3-201ENST00000298510 SPATA31A1Q5TZJ5 1347 aa25.46■■□□□ 1.67
PRDX3-201ENST00000298510 MAP3K19Q56UN5 1328 aa25.45■■□□□ 1.66
PRDX3-201ENST00000298510 RRS1Q15050 365 aaKnown RBP25.44■■□□□ 1.66
PRDX3-201ENST00000298510 KNSTRNQ9Y448 316 aa25.44■■□□□ 1.66
PRDX3-201ENST00000298510 ABCC6O95255 1503 aa25.43■■□□□ 1.66
PRDX3-201ENST00000298510 ONECUT3O60422 494 aaPredicted RBP25.43■■□□□ 1.66
PRDX3-201ENST00000298510 SEPT12Q8IYM1 358 aa25.43■■□□□ 1.66
PRDX3-201ENST00000298510 TOM1L2Q6ZVM7 507 aa25.41■■□□□ 1.66
PRDX3-201ENST00000298510 IP6K1Q92551 441 aa25.41■■□□□ 1.66
PRDX3-201ENST00000298510 WDR17Q8IZU2 1322 aa25.41■■□□□ 1.66
PRDX3-201ENST00000298510 A0A0G2JS52 829 aa25.4■■□□□ 1.66
PRDX3-201ENST00000298510 CSB-PGBD3P0DP91 1061 aa25.4■■□□□ 1.66
PRDX3-201ENST00000298510 AMPHP49418 695 aa25.4■■□□□ 1.66
PRDX3-201ENST00000298510 MYT1Q01538 1121 aa25.4■■□□□ 1.66
PRDX3-201ENST00000298510 CRB1P82279 1406 aa25.4■■□□□ 1.66
PRDX3-201ENST00000298510 ANKRD26Q9UPS8 1709 aa25.39■■□□□ 1.66
PRDX3-201ENST00000298510 PER1O15534 1290 aaPredicted RBP25.39■■□□□ 1.65
PRDX3-201ENST00000298510 HOXC9P31274 260 aa25.38■■□□□ 1.65
PRDX3-201ENST00000298510 TNNT2P45379 298 aaPredicted RBP25.38■■□□□ 1.65
PRDX3-201ENST00000298510 TCP11L2Q8N4U5 519 aa25.38■■□□□ 1.65
PRDX3-201ENST00000298510 ANKRD24Q8TF21 1146 aa25.38■■□□□ 1.65
PRDX3-201ENST00000298510 BRWD3Q6RI45 1802 aa25.37■■□□□ 1.65
PRDX3-201ENST00000298510 AMER1Q5JTC6 1135 aaPredicted RBP25.37■■□□□ 1.65
PRDX3-201ENST00000298510 BLMP54132 1417 aaPredicted RBP25.37■■□□□ 1.65
PRDX3-201ENST00000298510 NSD2O96028 1365 aa25.36■■□□□ 1.65
PRDX3-201ENST00000298510 ERBB3P21860 1342 aa25.36■■□□□ 1.65
PRDX3-201ENST00000298510 LTV1Q96GA3 475 aaPredicted RBP25.36■■□□□ 1.65
PRDX3-201ENST00000298510 BARGINQ6ZT62 677 aa25.35■■□□□ 1.65
PRDX3-201ENST00000298510 THRAP3Q9Y2W1 955 aaKnown RBP25.35■■□□□ 1.65
PRDX3-201ENST00000298510 EMILIN1Q9Y6C2 1016 aa25.35■■□□□ 1.65
PRDX3-201ENST00000298510 MORC1Q86VD1 984 aa25.34■■□□□ 1.65
PRDX3-201ENST00000298510 CARD10Q9BWT7 1032 aa25.34■■□□□ 1.65
PRDX3-201ENST00000298510 PEAK1Q9H792 1746 aa25.33■■□□□ 1.65
PRDX3-201ENST00000298510 THSD7AQ9UPZ6 1657 aa25.33■■□□□ 1.65
PRDX3-201ENST00000298510 RTL1A6NKG5 1358 aa25.33■■□□□ 1.64
PRDX3-201ENST00000298510 MAP2P11137 1827 aaKnown RBP25.33■■□□□ 1.64
PRDX3-201ENST00000298510 PPM1GO15355 546 aaPredicted RBP25.32■■□□□ 1.64
PRDX3-201ENST00000298510 NLRP2Q9NX02 1062 aa25.32■■□□□ 1.64
PRDX3-201ENST00000298510 HSP90AB2PQ58FF8 381 aa25.31■■□□□ 1.64
PRDX3-201ENST00000298510 KRT27Q7Z3Y8 459 aa25.31■■□□□ 1.64
PRDX3-201ENST00000298510 POLKQ9UBT6 870 aa25.31■■□□□ 1.64
PRDX3-201ENST00000298510 CNGB1Q14028 1251 aaPredicted RBP25.3■■□□□ 1.64
PRDX3-201ENST00000298510 CC2D1BQ5T0F9 858 aaKnown RBP25.3■■□□□ 1.64
PRDX3-201ENST00000298510 FLT4P35916 1363 aa25.3■■□□□ 1.64
PRDX3-201ENST00000298510 KIF24Q5T7B8 1368 aa25.28■■□□□ 1.64
PRDX3-201ENST00000298510 INSRP06213 1382 aa25.27■■□□□ 1.64
PRDX3-201ENST00000298510 EP400Q96L91 3159 aa25.27■■□□□ 1.64
PRDX3-201ENST00000298510 FAM182BQ5T319 152 aa25.25■■□□□ 1.63
PRDX3-201ENST00000298510 UPF1Q92900 1129 aaKnown RBP eCLIP25.25■■□□□ 1.63
PRDX3-201ENST00000298510 RGPD2P0DJD1 1756 aa25.25■■□□□ 1.63
PRDX3-201ENST00000298510 WNK3Q9BYP7 1800 aa25.24■■□□□ 1.63
PRDX3-201ENST00000298510 FAM208AQ9UK61 1670 aaKnown RBP25.23■■□□□ 1.63
PRDX3-201ENST00000298510 PARP4Q9UKK3 1724 aaKnown RBP25.23■■□□□ 1.63
PRDX3-201ENST00000298510 NPC1L1Q9UHC9 1359 aa25.22■■□□□ 1.63
PRDX3-201ENST00000298510 SMG6Q86US8 1419 aaKnown RBP25.22■■□□□ 1.63
PRDX3-201ENST00000298510 PDE3BQ13370 1112 aa25.22■■□□□ 1.63
PRDX3-201ENST00000298510 CDCA7Q9BWT1 371 aaPredicted RBP25.22■■□□□ 1.63
PRDX3-201ENST00000298510 DISP2A7MBM2 1401 aa25.21■■□□□ 1.63
PRDX3-201ENST00000298510 NBPF6Q5VWK0 638 aa25.21■■□□□ 1.63
PRDX3-201ENST00000298510 NBPF4Q96M43 638 aa25.21■■□□□ 1.63
PRDX3-201ENST00000298510 DDB1Q16531 1140 aa25.2■■□□□ 1.62
PRDX3-201ENST00000298510 USHBP1Q8N6Y0 703 aa25.19■■□□□ 1.62
PRDX3-201ENST00000298510 LRRC37A3O60309 1634 aa25.19■■□□□ 1.62
PRDX3-201ENST00000298510 IL2RBP14784 551 aa25.18■■□□□ 1.62
PRDX3-201ENST00000298510 DDX10Q13206 875 aaKnown RBP25.18■■□□□ 1.62
PRDX3-201ENST00000298510 EXOC5O00471 708 aa25.15■■□□□ 1.62
PRDX3-201ENST00000298510 EIF4A2Q14240 407 aaKnown RBP25.14■■□□□ 1.62
PRDX3-201ENST00000298510 MTHFSP49914 203 aa25.14■■□□□ 1.61
PRDX3-201ENST00000298510 FAM196AQ6ZSG2 479 aa25.12■■□□□ 1.61
PRDX3-201ENST00000298510 MARCH10Q8NA82 808 aaPredicted RBP25.12■■□□□ 1.61
PRDX3-201ENST00000298510 EYA1Q99502 592 aa25.12■■□□□ 1.61
PRDX3-201ENST00000298510 TNS2Q63HR2 1409 aa25.1■■□□□ 1.61
PRDX3-201ENST00000298510 MEGF6O75095 1541 aa25.1■■□□□ 1.61
PRDX3-201ENST00000298510 CCDC125Q86Z20 511 aa25.08■■□□□ 1.61
PRDX3-201ENST00000298510 RAPGEF4Q8WZA2 1011 aa25.08■■□□□ 1.61
PRDX3-201ENST00000298510 OVOS2A0A0G2JMS6 1433 aa25.07■■□□□ 1.6
PRDX3-201ENST00000298510 ZNF316A6NFI3 1004 aaPredicted RBP25.05■■□□□ 1.6
PRDX3-201ENST00000298510 TRIM37O94972 964 aa25.05■■□□□ 1.6
PRDX3-201ENST00000298510 TATP17735 454 aaPredicted RBP25.05■■□□□ 1.6
PRDX3-201ENST00000298510 NCAPD2Q15021 1401 aa25.05■■□□□ 1.6
PRDX3-201ENST00000298510 IL13P35225 146 aa25.05■■□□□ 1.6
PRDX3-201ENST00000298510 DDX54Q8TDD1 881 aaKnown RBP25.05■■□□□ 1.6
PRDX3-201ENST00000298510 SF3B2Q13435 895 aaKnown RBP25.04■■□□□ 1.6
PRDX3-201ENST00000298510 ZCRB1Q8TBF4 217 aaKnown RBP25.04■■□□□ 1.6
PRDX3-201ENST00000298510 PPP2R1AP30153 589 aa25.03■■□□□ 1.6
PRDX3-201ENST00000298510 IGSF1Q8N6C5 1336 aa25.03■■□□□ 1.6
PRDX3-201ENST00000298510 RGPD1P0DJD0 1748 aa25.01■■□□□ 1.59
PRDX3-201ENST00000298510 DEFB132Q7Z7B7 95 aa25.01■■□□□ 1.59
PRDX3-201ENST00000298510 SBF2Q86WG5 1849 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms