RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 PPP1R15BQ5SWA1 713 aa8.37□□□□□ -1.07
SSX3-201ENST00000298396 KCNV2Q8TDN2 545 aa8.37□□□□□ -1.07
SSX3-201ENST00000298396 TESK2Q96S53 571 aa8.37□□□□□ -1.07
SSX3-201ENST00000298396 HIRIP3Q9BW71 556 aaPredicted RBP8.37□□□□□ -1.07
SSX3-201ENST00000298396 ATP7BP35670 1465 aa8.37□□□□□ -1.07
SSX3-201ENST00000298396 ST20-MTHFSA0A0A6YYL1 179 aa8.36□□□□□ -1.07
SSX3-201ENST00000298396 DSG2Q14126 1118 aa8.36□□□□□ -1.07
SSX3-201ENST00000298396 E2F4Q16254 413 aa8.36□□□□□ -1.07
SSX3-201ENST00000298396 C3orf67Q6ZVT6 689 aa8.36□□□□□ -1.07
SSX3-201ENST00000298396 TMC2Q8TDI7 906 aa8.36□□□□□ -1.07
SSX3-201ENST00000298396 WDR70Q9NW82 654 aa8.36□□□□□ -1.07
SSX3-201ENST00000298396 KIF1AQ12756 1690 aa8.36□□□□□ -1.07
SSX3-201ENST00000298396 MSH6P52701 1360 aa8.35□□□□□ -1.07
SSX3-201ENST00000298396 EIF3AQ14152 1382 aaKnown RBP8.35□□□□□ -1.07
SSX3-201ENST00000298396 DISP3Q9P2K9 1392 aa8.35□□□□□ -1.07
SSX3-201ENST00000298396 PRR36Q9H6K5 1346 aa8.35□□□□□ -1.07
SSX3-201ENST00000298396 TRPM3Q9HCF6 1732 aaPredicted RBP8.35□□□□□ -1.07
SSX3-201ENST00000298396 C1orf167Q5SNV9 1468 aa8.35□□□□□ -1.07
SSX3-201ENST00000298396 HSPA5P11021 654 aaKnown RBP8.35□□□□□ -1.07
SSX3-201ENST00000298396 C19orf44Q9H6X5 657 aa8.35□□□□□ -1.07
SSX3-201ENST00000298396 POGKQ9P215 609 aa8.35□□□□□ -1.07
SSX3-201ENST00000298396 MON2Q7Z3U7 1717 aa8.34□□□□□ -1.07
SSX3-201ENST00000298396 NRKQ7Z2Y5 1582 aa8.34□□□□□ -1.07
SSX3-201ENST00000298396 PHLPP1O60346 1717 aa8.34□□□□□ -1.07
SSX3-201ENST00000298396 MARF1Q9Y4F3 1742 aaKnown RBP8.34□□□□□ -1.07
SSX3-201ENST00000298396 WASLO00401 505 aaPredicted RBP8.33□□□□□ -1.08
SSX3-201ENST00000298396 ARHGEF1Q92888 912 aaKnown RBP8.33□□□□□ -1.08
SSX3-201ENST00000298396 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.33□□□□□ -1.08
SSX3-201ENST00000298396 COL16A1Q07092 1604 aaPredicted RBP8.32□□□□□ -1.08
SSX3-201ENST00000298396 AHDC1Q5TGY3 1603 aaPredicted RBP8.32□□□□□ -1.08
SSX3-201ENST00000298396 ANKARQ7Z5J8 1434 aa8.32□□□□□ -1.08
SSX3-201ENST00000298396 C11orf95C9JLR9 678 aaPredicted RBP8.32□□□□□ -1.08
SSX3-201ENST00000298396 MAMSTRQ6ZN01 415 aa8.32□□□□□ -1.08
SSX3-201ENST00000298396 C14orf37Q86TY3 774 aa8.32□□□□□ -1.08
SSX3-201ENST00000298396 CDK19Q9BWU1 502 aa8.32□□□□□ -1.08
SSX3-201ENST00000298396 ALS2Q96Q42 1657 aa8.32□□□□□ -1.08
SSX3-201ENST00000298396 CD163L1Q9NR16 1453 aa8.32□□□□□ -1.08
SSX3-201ENST00000298396 CRYBG1Q9Y4K1 1723 aa8.32□□□□□ -1.08
SSX3-201ENST00000298396 NUTM2FA1L443 756 aa8.31□□□□□ -1.08
SSX3-201ENST00000298396 ZEB1P37275 1124 aaPredicted RBP8.31□□□□□ -1.08
SSX3-201ENST00000298396 EIF4G2P78344 907 aaKnown RBP eCLIP8.31□□□□□ -1.08
SSX3-201ENST00000298396 PLPP6Q8IY26 295 aa8.31□□□□□ -1.08
SSX3-201ENST00000298396 ABCA3Q99758 1704 aa8.31□□□□□ -1.08
SSX3-201ENST00000298396 PXDNQ92626 1479 aa8.31□□□□□ -1.08
SSX3-201ENST00000298396 UBAP1LF5GYI3 381 aa8.3□□□□□ -1.08
SSX3-201ENST00000298396 SLC34A2O95436 690 aa8.3□□□□□ -1.08
SSX3-201ENST00000298396 ATF3P18847 181 aa8.3□□□□□ -1.08
SSX3-201ENST00000298396 BRINP3Q76B58 766 aa8.3□□□□□ -1.08
SSX3-201ENST00000298396 ORAI2Q96SN7 254 aa8.3□□□□□ -1.08
SSX3-201ENST00000298396 EMILIN3Q9NT22 766 aa8.3□□□□□ -1.08
SSX3-201ENST00000298396 SLAIN2Q9P270 581 aa8.3□□□□□ -1.08
SSX3-201ENST00000298396 KIF20BQ96Q89 1820 aa8.29□□□□□ -1.08
SSX3-201ENST00000298396 NUDT16Q96DE0 195 aaKnown RBP8.29□□□□□ -1.08
SSX3-201ENST00000298396 PIK3C2AO00443 1686 aa8.29□□□□□ -1.08
SSX3-201ENST00000298396 PPIP5K1Q6PFW1 1433 aa8.29□□□□□ -1.08
SSX3-201ENST00000298396 EVC2Q86UK5 1308 aa8.29□□□□□ -1.08
SSX3-201ENST00000298396 SHPRHQ149N8 1683 aa8.28□□□□□ -1.08
SSX3-201ENST00000298396 USP54Q70EL1 1684 aa8.28□□□□□ -1.08
SSX3-201ENST00000298396 DDX17Q92841 729 aaKnown RBP8.28□□□□□ -1.08
SSX3-201ENST00000298396 SCUBE2Q9NQ36 999 aa8.28□□□□□ -1.08
SSX3-201ENST00000298396 POLR3AO14802 1390 aaPredicted RBP8.27□□□□□ -1.09
SSX3-201ENST00000298396 TOM1O60784 492 aa8.27□□□□□ -1.09
SSX3-201ENST00000298396 PIP4K2BP78356 416 aa8.27□□□□□ -1.09
SSX3-201ENST00000298396 OXER1Q8TDS5 423 aa8.27□□□□□ -1.09
SSX3-201ENST00000298396 COL22A1Q8NFW1 1626 aaPredicted RBP8.27□□□□□ -1.09
SSX3-201ENST00000298396 CPSF1Q10570 1443 aaKnown RBP8.27□□□□□ -1.09
SSX3-201ENST00000298396 KIF7Q2M1P5 1343 aa8.27□□□□□ -1.09
SSX3-201ENST00000298396 ANKRD26Q9UPS8 1709 aa8.26□□□□□ -1.09
SSX3-201ENST00000298396 ATAD2Q6PL18 1390 aa8.26□□□□□ -1.09
SSX3-201ENST00000298396 PLEKHG3A1L390 1219 aa8.26□□□□□ -1.09
SSX3-201ENST00000298396 SRPK2P78362 688 aaKnown RBP8.26□□□□□ -1.09
SSX3-201ENST00000298396 PTCD2Q8WV60 388 aaKnown RBP8.26□□□□□ -1.09
SSX3-201ENST00000298396 OTUD5Q96G74 571 aa8.26□□□□□ -1.09
SSX3-201ENST00000298396 SSH2Q76I76 1423 aa8.26□□□□□ -1.09
SSX3-201ENST00000298396 WASHC2AQ641Q2 1341 aa8.26□□□□□ -1.09
SSX3-201ENST00000298396 PHRF1Q9P1Y6 1649 aaKnown RBP8.25□□□□□ -1.09
SSX3-201ENST00000298396 CCDC7Q96M83 1385 aa8.25□□□□□ -1.09
SSX3-201ENST00000298396 TMF1P82094 1093 aa8.25□□□□□ -1.09
SSX3-201ENST00000298396 ESCO1Q5FWF5 840 aa8.25□□□□□ -1.09
SSX3-201ENST00000298396 PMFBP1Q8TBY8 1022 aa8.25□□□□□ -1.09
SSX3-201ENST00000298396 FBXO41Q8TF61 875 aa8.25□□□□□ -1.09
SSX3-201ENST00000298396 PUS7Q96PZ0 661 aaKnown RBP8.25□□□□□ -1.09
SSX3-201ENST00000298396 A0A1W2PP64 1363 aa8.24□□□□□ -1.09
SSX3-201ENST00000298396 USP6P35125 1406 aa8.24□□□□□ -1.09
SSX3-201ENST00000298396 XPCQ01831 940 aaPredicted RBP8.24□□□□□ -1.09
SSX3-201ENST00000298396 PDIA6Q15084 440 aa8.24□□□□□ -1.09
SSX3-201ENST00000298396 SLC12A5Q9H2X9 1139 aa8.24□□□□□ -1.09
SSX3-201ENST00000298396 CABP1Q9NZU7 370 aa8.24□□□□□ -1.09
SSX3-201ENST00000298396 ACEP12821 1306 aa8.24□□□□□ -1.09
SSX3-201ENST00000298396 SOS2Q07890 1332 aaPredicted RBP8.24□□□□□ -1.09
SSX3-201ENST00000298396 MED1Q15648 1581 aaPredicted RBP8.23□□□□□ -1.09
SSX3-201ENST00000298396 RGPD5Q99666 1765 aa8.23□□□□□ -1.09
SSX3-201ENST00000298396 FOXO3O43524 673 aa8.23□□□□□ -1.09
SSX3-201ENST00000298396 HSPA1LP34931 641 aa8.23□□□□□ -1.09
SSX3-201ENST00000298396 NINLQ9Y2I6 1382 aa8.22□□□□□ -1.09
SSX3-201ENST00000298396 LTN1O94822 1766 aa8.22□□□□□ -1.09
SSX3-201ENST00000298396 HOXB3P14651 431 aaPredicted RBP8.22□□□□□ -1.09
SSX3-201ENST00000298396 SLAIN1Q8ND83 568 aa8.22□□□□□ -1.09
SSX3-201ENST00000298396 MAP2P11137 1827 aaKnown RBP8.22□□□□□ -1.09
SSX3-201ENST00000298396 ANKRD36BQ8N2N9 1353 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms