RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 NUTM2BA6NNL0 878 aaPredicted RBP20.67■□□□□ 0.9
CDCP1-201ENST00000296129 GNAT3A8MTJ3 354 aa20.67■□□□□ 0.9
CDCP1-201ENST00000296129 NUTM2EB1AL46 878 aaPredicted RBP20.67■□□□□ 0.9
CDCP1-201ENST00000296129 NUTM2AQ8IVF1 878 aaPredicted RBP20.67■□□□□ 0.9
CDCP1-201ENST00000296129 MIS18AQ9NYP9 233 aa20.67■□□□□ 0.9
CDCP1-201ENST00000296129 SART3Q15020 963 aaKnown RBP20.66■□□□□ 0.9
CDCP1-201ENST00000296129 TMEM57Q8N5G2 664 aa20.66■□□□□ 0.9
CDCP1-201ENST00000296129 RSPH6AQ9H0K4 717 aa20.66■□□□□ 0.9
CDCP1-201ENST00000296129 PRDM11Q9NQV5 511 aa20.66■□□□□ 0.9
CDCP1-201ENST00000296129 TRAK2O60296 914 aa20.66■□□□□ 0.9
CDCP1-201ENST00000296129 MCM10Q7L590 875 aa20.65■□□□□ 0.9
CDCP1-201ENST00000296129 XBP1P17861 261 aa20.65■□□□□ 0.9
CDCP1-201ENST00000296129 UNC13AQ9UPW8 1703 aa20.65■□□□□ 0.9
CDCP1-201ENST00000296129 ZC3H6P61129 1189 aaKnown RBP20.65■□□□□ 0.9
CDCP1-201ENST00000296129 FBXO31Q5XUX0 539 aaPredicted RBP20.65■□□□□ 0.9
CDCP1-201ENST00000296129 NME9Q86XW9 330 aa20.65■□□□□ 0.9
CDCP1-201ENST00000296129 SRGAP3O43295 1099 aa20.64■□□□□ 0.89
CDCP1-201ENST00000296129 IPO7O95373 1038 aaKnown RBP20.64■□□□□ 0.89
CDCP1-201ENST00000296129 RRP12Q5JTH9 1297 aaKnown RBP20.64■□□□□ 0.89
CDCP1-201ENST00000296129 CAVIN1Q6NZI2 390 aaKnown RBP20.64■□□□□ 0.89
CDCP1-201ENST00000296129 HOMER1Q86YM7 354 aa20.64■□□□□ 0.89
CDCP1-201ENST00000296129 RPRD2Q5VT52 1461 aaKnown RBP20.63■□□□□ 0.89
CDCP1-201ENST00000296129 AACSQ86V21 672 aa20.63■□□□□ 0.89
CDCP1-201ENST00000296129 PRPF40AO75400 957 aaKnown RBP20.63■□□□□ 0.89
CDCP1-201ENST00000296129 FANCAO15360 1455 aa20.63■□□□□ 0.89
CDCP1-201ENST00000296129 NOS1P29475 1434 aa20.63■□□□□ 0.89
CDCP1-201ENST00000296129 RNF214Q8ND24 703 aa20.63■□□□□ 0.89
CDCP1-201ENST00000296129 DCTN1Q14203 1278 aa20.62■□□□□ 0.89
CDCP1-201ENST00000296129 NASPP49321 788 aaPredicted RBP20.62■□□□□ 0.89
CDCP1-201ENST00000296129 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.62■□□□□ 0.89
CDCP1-201ENST00000296129 CYP46A1Q9Y6A2 500 aa20.62■□□□□ 0.89
CDCP1-201ENST00000296129 SDF4Q9BRK5 362 aa20.61■□□□□ 0.89
CDCP1-201ENST00000296129 KCNH5Q8NCM2 988 aa20.61■□□□□ 0.89
CDCP1-201ENST00000296129 OLFM4Q6UX06 510 aa20.61■□□□□ 0.89
CDCP1-201ENST00000296129 SCAF11Q99590 1463 aaKnown RBP20.61■□□□□ 0.89
CDCP1-201ENST00000296129 MRE11P49959 708 aa20.61■□□□□ 0.89
CDCP1-201ENST00000296129 HSP90AA2PQ14568 343 aaPredicted RBP20.61■□□□□ 0.89
CDCP1-201ENST00000296129 IL1RAPL2Q9NP60 686 aa20.6■□□□□ 0.89
CDCP1-201ENST00000296129 STK3Q13188 491 aa20.6■□□□□ 0.89
CDCP1-201ENST00000296129 CCDC70Q6NSX1 233 aa20.6■□□□□ 0.89
CDCP1-201ENST00000296129 CCDC43Q96MW1 224 aaKnown RBP20.6■□□□□ 0.89
CDCP1-201ENST00000296129 CCDC57Q2TAC2 916 aa20.6■□□□□ 0.89
CDCP1-201ENST00000296129 DUSP27Q5VZP5 1158 aa20.6■□□□□ 0.89
CDCP1-201ENST00000296129 NAT10Q9H0A0 1025 aaKnown RBP20.6■□□□□ 0.89
CDCP1-201ENST00000296129 GNL3LQ9NVN8 582 aaKnown RBP20.6■□□□□ 0.89
CDCP1-201ENST00000296129 IFT57Q9NWB7 429 aa20.59■□□□□ 0.89
CDCP1-201ENST00000296129 K7ELQ4 463 aaPredicted RBP20.59■□□□□ 0.89
CDCP1-201ENST00000296129 PDCP20941 246 aa20.59■□□□□ 0.89
CDCP1-201ENST00000296129 IDI1Q13907 227 aa20.59■□□□□ 0.89
CDCP1-201ENST00000296129 EMILIN1Q9Y6C2 1016 aa20.59■□□□□ 0.89
CDCP1-201ENST00000296129 FIBPO43427 364 aa20.58■□□□□ 0.89
CDCP1-201ENST00000296129 RPAP2Q8IXW5 612 aaPredicted RBP20.58■□□□□ 0.89
CDCP1-201ENST00000296129 USHBP1Q8N6Y0 703 aa20.58■□□□□ 0.89
CDCP1-201ENST00000296129 SLC3A2P08195 630 aaKnown RBP20.58■□□□□ 0.89
CDCP1-201ENST00000296129 ATP2B1P20020 1258 aa20.58■□□□□ 0.89
CDCP1-201ENST00000296129 MBD3O95983 291 aa20.58■□□□□ 0.88
CDCP1-201ENST00000296129 RAPGEF6Q8TEU7 1601 aa20.58■□□□□ 0.88
CDCP1-201ENST00000296129 NKTRP30414 1462 aaKnown RBP20.58■□□□□ 0.88
CDCP1-201ENST00000296129 STK11IPQ8N1F8 1099 aa20.58■□□□□ 0.88
CDCP1-201ENST00000296129 DISP3Q9P2K9 1392 aa20.57■□□□□ 0.88
CDCP1-201ENST00000296129 LETM1O95202 739 aaPredicted RBP20.57■□□□□ 0.88
CDCP1-201ENST00000296129 CEBPZQ03701 1054 aaKnown RBP20.57■□□□□ 0.88
CDCP1-201ENST00000296129 WASLO00401 505 aaPredicted RBP20.57■□□□□ 0.88
CDCP1-201ENST00000296129 RARSP54136 660 aaKnown RBP20.57■□□□□ 0.88
CDCP1-201ENST00000296129 IKQ13123 557 aaPredicted RBP20.56■□□□□ 0.88
CDCP1-201ENST00000296129 C20orf194Q5TEA3 1177 aa20.56■□□□□ 0.88
CDCP1-201ENST00000296129 DENND4BO75064 1496 aaPredicted RBP20.56■□□□□ 0.88
CDCP1-201ENST00000296129 GPATCH8Q9UKJ3 1502 aaKnown RBP20.56■□□□□ 0.88
CDCP1-201ENST00000296129 FKBP4Q02790 459 aaKnown RBP eCLIP20.56■□□□□ 0.88
CDCP1-201ENST00000296129 CWC27Q6UX04 472 aaKnown RBP20.56■□□□□ 0.88
CDCP1-201ENST00000296129 SSH1Q8WYL5 1049 aa20.55■□□□□ 0.88
CDCP1-201ENST00000296129 TSPY26PQ9H489 355 aa20.55■□□□□ 0.88
CDCP1-201ENST00000296129 CWC22Q9HCG8 908 aaKnown RBP20.55■□□□□ 0.88
CDCP1-201ENST00000296129 NUTM1Q86Y26 1132 aa20.55■□□□□ 0.88
CDCP1-201ENST00000296129 ZNF396Q96N95 335 aaPredicted RBP20.55■□□□□ 0.88
CDCP1-201ENST00000296129 CCDC39Q9UFE4 941 aa20.55■□□□□ 0.88
CDCP1-201ENST00000296129 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.55■□□□□ 0.88
CDCP1-201ENST00000296129 MPHOSPH8Q99549 860 aa20.55■□□□□ 0.88
CDCP1-201ENST00000296129 AMOTL2Q9Y2J4 779 aa20.55■□□□□ 0.88
CDCP1-201ENST00000296129 KINO60870 393 aaKnown RBP20.55■□□□□ 0.88
CDCP1-201ENST00000296129 ANKRD1Q15327 319 aa20.55■□□□□ 0.88
CDCP1-201ENST00000296129 FAM43AQ8N2R8 423 aa20.54■□□□□ 0.88
CDCP1-201ENST00000296129 PRM3Q9NNZ6 103 aa20.54■□□□□ 0.88
CDCP1-201ENST00000296129 ABCC11Q96J66 1382 aa20.54■□□□□ 0.88
CDCP1-201ENST00000296129 EXOC6BQ9Y2D4 811 aa20.54■□□□□ 0.88
CDCP1-201ENST00000296129 ALDH1L2Q3SY69 923 aa20.53■□□□□ 0.88
CDCP1-201ENST00000296129 CEBPAP49715 358 aaPredicted RBP20.53■□□□□ 0.88
CDCP1-201ENST00000296129 PDILTQ8N807 584 aa20.53■□□□□ 0.88
CDCP1-201ENST00000296129 STK38Q15208 465 aa20.52■□□□□ 0.88
CDCP1-201ENST00000296129 AEBP1Q8IUX7 1158 aa20.52■□□□□ 0.88
CDCP1-201ENST00000296129 DHX29Q7Z478 1369 aaKnown RBP20.52■□□□□ 0.88
CDCP1-201ENST00000296129 PIP4K2BP78356 416 aa20.52■□□□□ 0.88
CDCP1-201ENST00000296129 NACAP1Q9BZK3 213 aa20.52■□□□□ 0.87
CDCP1-201ENST00000296129 CCDC85AQ96PX6 553 aaPredicted RBP20.51■□□□□ 0.87
CDCP1-201ENST00000296129 C14orf93Q9H972 538 aaKnown RBP20.51■□□□□ 0.87
CDCP1-201ENST00000296129 GPS2Q13227 327 aa20.51■□□□□ 0.87
CDCP1-201ENST00000296129 UGGT2Q9NYU1 1516 aa20.51■□□□□ 0.87
CDCP1-201ENST00000296129 ZSCAN25Q6NSZ9 544 aa20.51■□□□□ 0.87
CDCP1-201ENST00000296129 SMARCA5O60264 1052 aaPredicted RBP20.51■□□□□ 0.87
CDCP1-201ENST00000296129 PDRG1Q9NUG6 133 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms