RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 ZNF396Q96N95 335 aaPredicted RBP20.87■□□□□ 0.93
PCDHA13-201ENST00000289272 GNAI3P08754 354 aa20.86■□□□□ 0.93
PCDHA13-201ENST00000289272 H0YHG0 523 aa20.86■□□□□ 0.93
PCDHA13-201ENST00000289272 CPLX1O14810 134 aa20.86■□□□□ 0.93
PCDHA13-201ENST00000289272 ANKRD1Q15327 319 aa20.86■□□□□ 0.93
PCDHA13-201ENST00000289272 PLEKHO1Q53GL0 409 aaPredicted RBP20.86■□□□□ 0.93
PCDHA13-201ENST00000289272 NLRP2Q9NX02 1062 aa20.85■□□□□ 0.93
PCDHA13-201ENST00000289272 UBTFL1P0CB47 393 aaPredicted RBP20.85■□□□□ 0.93
PCDHA13-201ENST00000289272 GPATCH8Q9UKJ3 1502 aaKnown RBP20.85■□□□□ 0.93
PCDHA13-201ENST00000289272 PIP4K2AP48426 406 aaPredicted RBP20.84■□□□□ 0.93
PCDHA13-201ENST00000289272 ANKLE2Q86XL3 938 aa20.84■□□□□ 0.93
PCDHA13-201ENST00000289272 AEBP2Q6ZN18 517 aaPredicted RBP20.84■□□□□ 0.93
PCDHA13-201ENST00000289272 HS1BP3Q53T59 392 aa20.84■□□□□ 0.93
PCDHA13-201ENST00000289272 CCDC191Q8NCU4 936 aa20.84■□□□□ 0.93
PCDHA13-201ENST00000289272 SMARCE1Q969G3 411 aa20.84■□□□□ 0.93
PCDHA13-201ENST00000289272 CBFA2T2O43439 604 aa20.83■□□□□ 0.93
PCDHA13-201ENST00000289272 ZSCAN31Q96LW9 406 aaPredicted RBP20.83■□□□□ 0.93
PCDHA13-201ENST00000289272 SRCIN1Q9C0H9 1055 aa20.83■□□□□ 0.93
PCDHA13-201ENST00000289272 UVSSAQ2YD98 709 aa20.83■□□□□ 0.93
PCDHA13-201ENST00000289272 CHD1LQ86WJ1 897 aa20.83■□□□□ 0.93
PCDHA13-201ENST00000289272 CCDC30Q5VVM6 783 aa20.83■□□□□ 0.92
PCDHA13-201ENST00000289272 ABTB2Q8N961 1025 aa20.83■□□□□ 0.92
PCDHA13-201ENST00000289272 ZMYND15Q9H091 742 aa20.83■□□□□ 0.92
PCDHA13-201ENST00000289272 CD109Q6YHK3 1445 aa20.83■□□□□ 0.92
PCDHA13-201ENST00000289272 DNAJC5BQ9UF47 199 aa20.83■□□□□ 0.92
PCDHA13-201ENST00000289272 KRT85P78386 507 aa20.82■□□□□ 0.92
PCDHA13-201ENST00000289272 CREBRFQ8IUR6 639 aa20.82■□□□□ 0.92
PCDHA13-201ENST00000289272 SDF4Q9BRK5 362 aa20.82■□□□□ 0.92
PCDHA13-201ENST00000289272 PES1O00541 588 aaKnown RBP20.82■□□□□ 0.92
PCDHA13-201ENST00000289272 DEF6Q9H4E7 631 aa20.82■□□□□ 0.92
PCDHA13-201ENST00000289272 C1orf115Q9H7X2 142 aa20.82■□□□□ 0.92
PCDHA13-201ENST00000289272 ZNF608Q9ULD9 1512 aaPredicted RBP20.81■□□□□ 0.92
PCDHA13-201ENST00000289272 NEMFO60524 1076 aa20.81■□□□□ 0.92
PCDHA13-201ENST00000289272 RTEL1-TNFRSF6BF6WH68 1400 aa20.81■□□□□ 0.92
PCDHA13-201ENST00000289272 FCHSD2O94868 740 aa20.81■□□□□ 0.92
PCDHA13-201ENST00000289272 MYO6Q9UM54 1294 aa20.81■□□□□ 0.92
PCDHA13-201ENST00000289272 NKTRP30414 1462 aaKnown RBP20.81■□□□□ 0.92
PCDHA13-201ENST00000289272 CFAP43Q8NDM7 1665 aa20.81■□□□□ 0.92
PCDHA13-201ENST00000289272 SAFBQ15424 915 aaKnown RBP eCLIP20.8■□□□□ 0.92
PCDHA13-201ENST00000289272 ESCO1Q5FWF5 840 aa20.8■□□□□ 0.92
PCDHA13-201ENST00000289272 PPP6R1Q9UPN7 881 aa20.8■□□□□ 0.92
PCDHA13-201ENST00000289272 GBP3Q9H0R5 595 aa20.79■□□□□ 0.92
PCDHA13-201ENST00000289272 TNMDQ9H2S6 317 aa20.79■□□□□ 0.92
PCDHA13-201ENST00000289272 CTTNBP2Q8WZ74 1663 aa20.79■□□□□ 0.92
PCDHA13-201ENST00000289272 FAM107BQ9H098 131 aa20.79■□□□□ 0.92
PCDHA13-201ENST00000289272 RAPGEF3O95398 923 aa20.79■□□□□ 0.92
PCDHA13-201ENST00000289272 TMPOP42166 694 aaKnown RBP20.79■□□□□ 0.92
PCDHA13-201ENST00000289272 DACH1Q9UI36 760 aa20.79■□□□□ 0.92
PCDHA13-201ENST00000289272 SCAF11Q99590 1463 aaKnown RBP20.79■□□□□ 0.92
PCDHA13-201ENST00000289272 TRDNQ13061 729 aa20.78■□□□□ 0.92
PCDHA13-201ENST00000289272 TCOF1Q13428 1488 aaKnown RBP20.78■□□□□ 0.92
PCDHA13-201ENST00000289272 FILIP1LQ4L180 1135 aa20.78■□□□□ 0.92
PCDHA13-201ENST00000289272 RAPGEF6Q8TEU7 1601 aa20.78■□□□□ 0.92
PCDHA13-201ENST00000289272 C20orf194Q5TEA3 1177 aa20.78■□□□□ 0.92
PCDHA13-201ENST00000289272 SULT6B1Q6IMI4 303 aa20.78■□□□□ 0.92
PCDHA13-201ENST00000289272 SYTL4Q96C24 671 aaPredicted RBP20.77■□□□□ 0.92
PCDHA13-201ENST00000289272 RALGAPBQ86X10 1494 aa20.77■□□□□ 0.92
PCDHA13-201ENST00000289272 RIC3Q7Z5B4 369 aa20.77■□□□□ 0.92
PCDHA13-201ENST00000289272 LRPPRCP42704 1394 aaKnown RBP20.77■□□□□ 0.92
PCDHA13-201ENST00000289272 KIAA0754O94854 1291 aa20.77■□□□□ 0.91
PCDHA13-201ENST00000289272 TXLNBQ8N3L3 684 aa20.77■□□□□ 0.91
PCDHA13-201ENST00000289272 FAM135AQ9P2D6 1515 aa20.76■□□□□ 0.91
PCDHA13-201ENST00000289272 KLHL40Q2TBA0 621 aa20.76■□□□□ 0.91
PCDHA13-201ENST00000289272 GTPBP4Q9BZE4 634 aaKnown RBP20.76■□□□□ 0.91
PCDHA13-201ENST00000289272 CCDC183Q5T5S1 534 aa20.76■□□□□ 0.91
PCDHA13-201ENST00000289272 NUTM2GQ5VZR2 741 aa20.76■□□□□ 0.91
PCDHA13-201ENST00000289272 JMYQ8N9B5 988 aa20.76■□□□□ 0.91
PCDHA13-201ENST00000289272 ADGRL1O94910 1474 aa20.76■□□□□ 0.91
PCDHA13-201ENST00000289272 SMC2O95347 1197 aa20.76■□□□□ 0.91
PCDHA13-201ENST00000289272 GNAI2P04899 355 aa20.76■□□□□ 0.91
PCDHA13-201ENST00000289272 ERC1Q8IUD2 1116 aa20.76■□□□□ 0.91
PCDHA13-201ENST00000289272 DISP3Q9P2K9 1392 aa20.75■□□□□ 0.91
PCDHA13-201ENST00000289272 DHX16O60231 1041 aaKnown RBP20.75■□□□□ 0.91
PCDHA13-201ENST00000289272 TBC1D2Q9BYX2 928 aa20.75■□□□□ 0.91
PCDHA13-201ENST00000289272 MARCH6O60337 910 aa20.75■□□□□ 0.91
PCDHA13-201ENST00000289272 RARSP54136 660 aaKnown RBP20.75■□□□□ 0.91
PCDHA13-201ENST00000289272 SLC4A2P04920 1241 aa20.74■□□□□ 0.91
PCDHA13-201ENST00000289272 TATP17735 454 aaPredicted RBP20.74■□□□□ 0.91
PCDHA13-201ENST00000289272 HMGB2P26583 209 aaKnown RBP20.74■□□□□ 0.91
PCDHA13-201ENST00000289272 VPS37DQ86XT2 251 aa20.74■□□□□ 0.91
PCDHA13-201ENST00000289272 DUSP27Q5VZP5 1158 aa20.74■□□□□ 0.91
PCDHA13-201ENST00000289272 FILIP1Q7Z7B0 1213 aa20.74■□□□□ 0.91
PCDHA13-201ENST00000289272 CCT4P50991 539 aaKnown RBP20.74■□□□□ 0.91
PCDHA13-201ENST00000289272 IQCEQ6IPM2 695 aa20.74■□□□□ 0.91
PCDHA13-201ENST00000289272 NUP62CLQ9H1M0 184 aa20.74■□□□□ 0.91
PCDHA13-201ENST00000289272 SURF6O75683 361 aaKnown RBP20.74■□□□□ 0.91
PCDHA13-201ENST00000289272 PCMTD1Q96MG8 357 aaPredicted RBP20.74■□□□□ 0.91
PCDHA13-201ENST00000289272 NFE2L2Q16236 605 aa20.73■□□□□ 0.91
PCDHA13-201ENST00000289272 NCBP3Q53F19 620 aaKnown RBP20.73■□□□□ 0.91
PCDHA13-201ENST00000289272 TMCO3Q6UWJ1 677 aa20.73■□□□□ 0.91
PCDHA13-201ENST00000289272 FIBPO43427 364 aa20.73■□□□□ 0.91
PCDHA13-201ENST00000289272 ADGRF5Q8IZF2 1346 aa20.73■□□□□ 0.91
PCDHA13-201ENST00000289272 RRP12Q5JTH9 1297 aaKnown RBP20.73■□□□□ 0.91
PCDHA13-201ENST00000289272 CEP57L1Q8IYX8 460 aa20.73■□□□□ 0.91
PCDHA13-201ENST00000289272 CLASRPQ8N2M8 674 aaKnown RBP20.73■□□□□ 0.91
PCDHA13-201ENST00000289272 CYP46A1Q9Y6A2 500 aa20.73■□□□□ 0.91
PCDHA13-201ENST00000289272 ITSN2Q9NZM3 1697 aa20.72■□□□□ 0.91
PCDHA13-201ENST00000289272 NUP153P49790 1475 aaKnown RBP20.72■□□□□ 0.91
PCDHA13-201ENST00000289272 RPAP2Q8IXW5 612 aaPredicted RBP20.72■□□□□ 0.91
PCDHA13-201ENST00000289272 SPC24Q8NBT2 197 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms