RNA–Protein interactions for RNA: ENST00000287097.5

CD109-201, Transcript of CD109 molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD109, Length 9,130 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD109-201ENST00000287097 ARHGAP29Q52LW3 1261 aa9.33□□□□□ -0.92
CD109-201ENST00000287097 ZNF397Q8NF99 534 aaPredicted RBP9.33□□□□□ -0.92
CD109-201ENST00000287097 GOPCQ9HD26 462 aa9.33□□□□□ -0.92
CD109-201ENST00000287097 GIGYF2Q6Y7W6 1299 aaKnown RBP9.33□□□□□ -0.92
CD109-201ENST00000287097 TRERF1Q96PN7 1200 aa9.33□□□□□ -0.92
CD109-201ENST00000287097 PRKRIP1Q9H875 184 aaPredicted RBP9.32□□□□□ -0.92
CD109-201ENST00000287097 CDC45O75419 566 aa9.32□□□□□ -0.92
CD109-201ENST00000287097 API5Q9BZZ5 524 aaKnown RBP9.32□□□□□ -0.92
CD109-201ENST00000287097 GRPEL1Q9HAV7 217 aa9.32□□□□□ -0.92
CD109-201ENST00000287097 CUX2O14529 1486 aa9.32□□□□□ -0.92
CD109-201ENST00000287097 GSTTP1A0A1W2PQM5 241 aa9.32□□□□□ -0.92
CD109-201ENST00000287097 CCDC160A6NGH7 325 aa9.32□□□□□ -0.92
CD109-201ENST00000287097 DIAPH1O60610 1272 aaKnown RBP9.32□□□□□ -0.92
CD109-201ENST00000287097 SLC3A2P08195 630 aaKnown RBP9.32□□□□□ -0.92
CD109-201ENST00000287097 PSME1Q06323 249 aa9.32□□□□□ -0.92
CD109-201ENST00000287097 TRIM21P19474 475 aaKnown RBP9.32□□□□□ -0.92
CD109-201ENST00000287097 ME1P48163 572 aa9.32□□□□□ -0.92
CD109-201ENST00000287097 ATP2B2Q01814 1243 aa9.32□□□□□ -0.92
CD109-201ENST00000287097 EFCAB2Q5VUJ9 269 aa9.32□□□□□ -0.92
CD109-201ENST00000287097 CASQ1P31415 396 aa9.31□□□□□ -0.92
CD109-201ENST00000287097 SPECC1LQ69YQ0 1117 aa9.31□□□□□ -0.92
CD109-201ENST00000287097 DNAAF4Q8WXU2 420 aa9.31□□□□□ -0.92
CD109-201ENST00000287097 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.31□□□□□ -0.92
CD109-201ENST00000287097 V9GYY5 206 aaPredicted RBP9.31□□□□□ -0.92
CD109-201ENST00000287097 KIF2AO00139 706 aaPredicted RBP9.31□□□□□ -0.92
CD109-201ENST00000287097 POLR3GO15318 223 aaPredicted RBP9.31□□□□□ -0.92
CD109-201ENST00000287097 SOGA3Q5TF21 947 aa9.31□□□□□ -0.92
CD109-201ENST00000287097 POTEJP0CG39 1038 aa9.31□□□□□ -0.92
CD109-201ENST00000287097 NAP1L3Q99457 506 aaPredicted RBP9.31□□□□□ -0.92
CD109-201ENST00000287097 ZBED9Q6R2W3 1325 aa9.31□□□□□ -0.92
CD109-201ENST00000287097 PPM1FP49593 454 aaPredicted RBP9.31□□□□□ -0.92
CD109-201ENST00000287097 HOOK3Q86VS8 718 aa9.31□□□□□ -0.92
CD109-201ENST00000287097 TIGD1Q96MW7 591 aa9.31□□□□□ -0.92
CD109-201ENST00000287097 NEK4P51957 841 aa9.31□□□□□ -0.92
CD109-201ENST00000287097 ANKRD30AQ9BXX3 1397 aa9.31□□□□□ -0.92
CD109-201ENST00000287097 ESPNB1AK53 854 aa9.3□□□□□ -0.92
CD109-201ENST00000287097 SERPINA10Q9UK55 444 aa9.3□□□□□ -0.92
CD109-201ENST00000287097 EIF5P55010 431 aaKnown RBP9.3□□□□□ -0.92
CD109-201ENST00000287097 SPECC1Q5M775 1068 aa9.3□□□□□ -0.92
CD109-201ENST00000287097 WDR66Q8TBY9 1149 aa9.3□□□□□ -0.92
CD109-201ENST00000287097 TMCO5BA8MYB1 307 aa9.3□□□□□ -0.92
CD109-201ENST00000287097 FERP16591 822 aa9.3□□□□□ -0.92
CD109-201ENST00000287097 MATR3P43243 847 aaKnown RBP eCLIP9.3□□□□□ -0.92
CD109-201ENST00000287097 PTPN14Q15678 1187 aa9.3□□□□□ -0.92
CD109-201ENST00000287097 FAM114A1Q8IWE2 563 aa9.3□□□□□ -0.92
CD109-201ENST00000287097 KIF18AQ8NI77 898 aa9.3□□□□□ -0.92
CD109-201ENST00000287097 FSD1Q9BTV5 496 aa9.3□□□□□ -0.92
CD109-201ENST00000287097 SMTNL1A8MU46 457 aa9.29□□□□□ -0.92
CD109-201ENST00000287097 HIP1O00291 1037 aa9.29□□□□□ -0.92
CD109-201ENST00000287097 TBC1D2BQ9UPU7 963 aa9.29□□□□□ -0.92
CD109-201ENST00000287097 KAT6BQ8WYB5 2073 aa9.29□□□□□ -0.92
CD109-201ENST00000287097 KRT85P78386 507 aa9.29□□□□□ -0.92
CD109-201ENST00000287097 FILIP1Q7Z7B0 1213 aa9.29□□□□□ -0.92
CD109-201ENST00000287097 KIF5CO60282 957 aa9.29□□□□□ -0.92
CD109-201ENST00000287097 FBF1Q8TES7 1133 aa9.29□□□□□ -0.92
CD109-201ENST00000287097 GTF2F1P35269 517 aaKnown RBP eCLIP9.28□□□□□ -0.92
CD109-201ENST00000287097 SPA17Q15506 151 aa9.28□□□□□ -0.92
CD109-201ENST00000287097 PHF23Q9BUL5 403 aaPredicted RBP9.28□□□□□ -0.92
CD109-201ENST00000287097 BMP2KQ9NSY1 1161 aaPredicted RBP9.28□□□□□ -0.92
CD109-201ENST00000287097 IRX3P78415 501 aaPredicted RBP9.28□□□□□ -0.92
CD109-201ENST00000287097 DDX46Q7L014 1031 aaKnown RBP9.28□□□□□ -0.92
CD109-201ENST00000287097 SURF6O75683 361 aaKnown RBP9.28□□□□□ -0.92
CD109-201ENST00000287097 PIBF1Q8WXW3 757 aa9.28□□□□□ -0.92
CD109-201ENST00000287097 ERC1Q8IUD2 1116 aa9.28□□□□□ -0.92
CD109-201ENST00000287097 TAOK3Q9H2K8 898 aa9.28□□□□□ -0.92
CD109-201ENST00000287097 GGNBP2Q9H3C7 697 aa9.28□□□□□ -0.92
CD109-201ENST00000287097 KIF3CO14782 793 aa9.28□□□□□ -0.92
CD109-201ENST00000287097 CCDC178Q5BJE1 867 aa9.28□□□□□ -0.92
CD109-201ENST00000287097 C11orf95C9JLR9 678 aaPredicted RBP9.28□□□□□ -0.92
CD109-201ENST00000287097 UBTFL1P0CB47 393 aaPredicted RBP9.28□□□□□ -0.92
CD109-201ENST00000287097 UPF3BQ9BZI7 483 aaKnown RBP9.28□□□□□ -0.92
CD109-201ENST00000287097 EVC2Q86UK5 1308 aa9.28□□□□□ -0.92
CD109-201ENST00000287097 CTR9Q6PD62 1173 aa9.28□□□□□ -0.92
CD109-201ENST00000287097 TRIM22Q8IYM9 498 aa9.28□□□□□ -0.92
CD109-201ENST00000287097 DNAI2Q9GZS0 605 aa9.28□□□□□ -0.92
CD109-201ENST00000287097 HOMER2Q9NSB8 354 aa9.28□□□□□ -0.92
CD109-201ENST00000287097 SMARCC1Q92922 1105 aaPredicted RBP9.28□□□□□ -0.92
CD109-201ENST00000287097 CDCA7LQ96GN5 454 aa9.28□□□□□ -0.92
CD109-201ENST00000287097 PPP1R1BQ9UD71 204 aaPredicted RBP9.28□□□□□ -0.92
CD109-201ENST00000287097 WDR33Q9C0J8 1336 aaKnown RBP9.27□□□□□ -0.92
CD109-201ENST00000287097 ZSCAN12O43309 604 aa9.27□□□□□ -0.92
CD109-201ENST00000287097 ANKRD1Q15327 319 aa9.27□□□□□ -0.92
CD109-201ENST00000287097 CCDC6Q16204 474 aa9.27□□□□□ -0.92
CD109-201ENST00000287097 RAI14Q9P0K7 980 aa9.27□□□□□ -0.92
CD109-201ENST00000287097 COMMD10Q9Y6G5 202 aa9.27□□□□□ -0.92
CD109-201ENST00000287097 CEP57L1Q8IYX8 460 aa9.27□□□□□ -0.93
CD109-201ENST00000287097 ZHX1Q9UKY1 873 aaPredicted RBP9.27□□□□□ -0.93
CD109-201ENST00000287097 HSPA4P34932 840 aa9.27□□□□□ -0.93
CD109-201ENST00000287097 CFAP100Q494V2 611 aa9.27□□□□□ -0.93
CD109-201ENST00000287097 NOL3O60936 208 aaKnown RBP9.27□□□□□ -0.93
CD109-201ENST00000287097 AAMPQ13685 434 aa9.26□□□□□ -0.93
CD109-201ENST00000287097 FSD2A1L4K1 749 aa9.26□□□□□ -0.93
CD109-201ENST00000287097 LARP1Q6PKG0 1096 aaKnown RBP9.26□□□□□ -0.93
CD109-201ENST00000287097 SIL1Q9H173 461 aa9.26□□□□□ -0.93
CD109-201ENST00000287097 FMN1Q68DA7 1419 aa9.26□□□□□ -0.93
CD109-201ENST00000287097 PAFAH1B1P43034 410 aa9.26□□□□□ -0.93
CD109-201ENST00000287097 RUNDC1Q96C34 613 aa9.26□□□□□ -0.93
CD109-201ENST00000287097 KIF4BQ2VIQ3 1234 aa9.26□□□□□ -0.93
CD109-201ENST00000287097 CTNNBL1Q8WYA6 563 aaPredicted RBP9.26□□□□□ -0.93
CD109-201ENST00000287097 CPSF2Q9P2I0 782 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms