RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 NFKBIBQ15653 356 aa24.11■■□□□ 1.45
CACNA1B-201ENST00000277549 ZNF530Q6P9A1 599 aaPredicted RBP24.11■■□□□ 1.45
CACNA1B-201ENST00000277549 TSR2Q969E8 191 aaKnown RBP24.11■■□□□ 1.45
CACNA1B-201ENST00000277549 UBA5Q9GZZ9 404 aa24.11■■□□□ 1.45
CACNA1B-201ENST00000277549 PRDM11Q9NQV5 511 aa24.11■■□□□ 1.45
CACNA1B-201ENST00000277549 ZNHIT6Q9NWK9 470 aaKnown RBP24.1■■□□□ 1.45
CACNA1B-201ENST00000277549 IDH1O75874 414 aaKnown RBP24.1■■□□□ 1.45
CACNA1B-201ENST00000277549 HDGFL1Q5TGJ6 251 aa24.1■■□□□ 1.45
CACNA1B-201ENST00000277549 ERLIN2O94905 339 aa24.09■■□□□ 1.45
CACNA1B-201ENST00000277549 TMOD2Q9NZR1 351 aa24.09■■□□□ 1.45
CACNA1B-201ENST00000277549 ME1P48163 572 aa24.09■■□□□ 1.45
CACNA1B-201ENST00000277549 NOB1Q9ULX3 412 aaKnown RBP24.09■■□□□ 1.45
CACNA1B-201ENST00000277549 MIA2Q96PC5 1412 aa24.09■■□□□ 1.45
CACNA1B-201ENST00000277549 SULT6B1Q6IMI4 303 aa24.08■■□□□ 1.45
CACNA1B-201ENST00000277549 GAS2L2Q8NHY3 880 aa24.08■■□□□ 1.45
CACNA1B-201ENST00000277549 CT47B1P0C2W7 299 aaPredicted RBP24.08■■□□□ 1.45
CACNA1B-201ENST00000277549 SPG7Q9UQ90 795 aa24.08■■□□□ 1.45
CACNA1B-201ENST00000277549 NUCB2P80303 420 aa24.08■■□□□ 1.45
CACNA1B-201ENST00000277549 AACSQ86V21 672 aa24.08■■□□□ 1.45
CACNA1B-201ENST00000277549 TRIM22Q8IYM9 498 aa24.08■■□□□ 1.44
CACNA1B-201ENST00000277549 ZNF396Q96N95 335 aaPredicted RBP24.07■■□□□ 1.44
CACNA1B-201ENST00000277549 POLR3DP05423 398 aaPredicted RBP24.07■■□□□ 1.44
CACNA1B-201ENST00000277549 NACADO15069 1562 aa24.07■■□□□ 1.44
CACNA1B-201ENST00000277549 ANKRD18AQ8IVF6 992 aa24.07■■□□□ 1.44
CACNA1B-201ENST00000277549 BTBD11A6QL63 1104 aa24.07■■□□□ 1.44
CACNA1B-201ENST00000277549 BAZ1AQ9NRL2 1556 aaPredicted RBP24.07■■□□□ 1.44
CACNA1B-201ENST00000277549 PTCD1O75127 700 aaKnown RBP24.06■■□□□ 1.44
CACNA1B-201ENST00000277549 ZPR1O75312 459 aa24.06■■□□□ 1.44
CACNA1B-201ENST00000277549 SLC26A8Q96RN1 970 aa24.06■■□□□ 1.44
CACNA1B-201ENST00000277549 CCDC88BA6NC98 1476 aa24.06■■□□□ 1.44
CACNA1B-201ENST00000277549 TNNT1P13805 278 aa24.06■■□□□ 1.44
CACNA1B-201ENST00000277549 RRS1Q15050 365 aaKnown RBP24.06■■□□□ 1.44
CACNA1B-201ENST00000277549 PPFIBP1Q86W92 1011 aa24.06■■□□□ 1.44
CACNA1B-201ENST00000277549 UBAC1Q9BSL1 405 aa24.06■■□□□ 1.44
CACNA1B-201ENST00000277549 MIS18AQ9NYP9 233 aa24.05■■□□□ 1.44
CACNA1B-201ENST00000277549 GBP2P32456 591 aaPredicted RBP24.05■■□□□ 1.44
CACNA1B-201ENST00000277549 BCAR3O75815 825 aa24.05■■□□□ 1.44
CACNA1B-201ENST00000277549 TWISTNBQ3B726 338 aaPredicted RBP24.05■■□□□ 1.44
CACNA1B-201ENST00000277549 EXOSC9Q06265 439 aaKnown RBP24.05■■□□□ 1.44
CACNA1B-201ENST00000277549 MINDY4BA8MYZ0 360 aa24.04■■□□□ 1.44
CACNA1B-201ENST00000277549 ZNF644Q9H582 1327 aaPredicted RBP24.04■■□□□ 1.44
CACNA1B-201ENST00000277549 IGHMBP2P38935 993 aaKnown RBP24.04■■□□□ 1.44
CACNA1B-201ENST00000277549 DRC1Q96MC2 740 aa24.04■■□□□ 1.44
CACNA1B-201ENST00000277549 GNAI2P04899 355 aa24.04■■□□□ 1.44
CACNA1B-201ENST00000277549 HMGN5P82970 282 aaKnown RBP24.04■■□□□ 1.44
CACNA1B-201ENST00000277549 STIM1Q13586 685 aa24.04■■□□□ 1.44
CACNA1B-201ENST00000277549 GOLGA6L10A6NI86 522 aa24.03■■□□□ 1.44
CACNA1B-201ENST00000277549 DNA2P51530 1060 aa24.03■■□□□ 1.44
CACNA1B-201ENST00000277549 ANAPC15P60006 121 aa24.03■■□□□ 1.44
CACNA1B-201ENST00000277549 VTI1AQ96AJ9 217 aa24.03■■□□□ 1.44
CACNA1B-201ENST00000277549 DESP17661 470 aa24.02■■□□□ 1.44
CACNA1B-201ENST00000277549 CCDC96Q2M329 555 aa24.02■■□□□ 1.44
CACNA1B-201ENST00000277549 CWC27Q6UX04 472 aaKnown RBP24.02■■□□□ 1.44
CACNA1B-201ENST00000277549 ERCC4Q92889 916 aaPredicted RBP24.02■■□□□ 1.44
CACNA1B-201ENST00000277549 LRRFIP2Q9Y608 721 aaKnown RBP24.02■■□□□ 1.44
CACNA1B-201ENST00000277549 TSPY26PQ9H489 355 aa24.02■■□□□ 1.44
CACNA1B-201ENST00000277549 CDK19Q9BWU1 502 aa24.01■■□□□ 1.43
CACNA1B-201ENST00000277549 NASPP49321 788 aaPredicted RBP24.01■■□□□ 1.43
CACNA1B-201ENST00000277549 PRKRIP1Q9H875 184 aaPredicted RBP24.01■■□□□ 1.43
CACNA1B-201ENST00000277549 GNAI3P08754 354 aa24.01■■□□□ 1.43
CACNA1B-201ENST00000277549 COMMD10Q9Y6G5 202 aa24.01■■□□□ 1.43
CACNA1B-201ENST00000277549 WDHD1O75717 1129 aaPredicted RBP24■■□□□ 1.43
CACNA1B-201ENST00000277549 CCDC112Q8NEF3 446 aa24■■□□□ 1.43
CACNA1B-201ENST00000277549 FAM43AQ8N2R8 423 aa23.99■■□□□ 1.43
CACNA1B-201ENST00000277549 CCDC82Q8N4S0 544 aa23.99■■□□□ 1.43
CACNA1B-201ENST00000277549 USHBP1Q8N6Y0 703 aa23.99■■□□□ 1.43
CACNA1B-201ENST00000277549 DDX11Q96FC9 970 aa23.99■■□□□ 1.43
CACNA1B-201ENST00000277549 TMX1Q9H3N1 280 aa23.99■■□□□ 1.43
CACNA1B-201ENST00000277549 RBM10P98175 930 aaKnown RBP23.99■■□□□ 1.43
CACNA1B-201ENST00000277549 NOL7Q9UMY1 257 aaKnown RBP23.99■■□□□ 1.43
CACNA1B-201ENST00000277549 RSPH6AQ9H0K4 717 aa23.98■■□□□ 1.43
CACNA1B-201ENST00000277549 IL1RAPL2Q9NP60 686 aa23.98■■□□□ 1.43
CACNA1B-201ENST00000277549 CCDC39Q9UFE4 941 aa23.98■■□□□ 1.43
CACNA1B-201ENST00000277549 TRIM21P19474 475 aaKnown RBP23.98■■□□□ 1.43
CACNA1B-201ENST00000277549 PPP4R3AQ6IN85 833 aa23.98■■□□□ 1.43
CACNA1B-201ENST00000277549 CCDC113Q9H0I3 377 aa23.98■■□□□ 1.43
CACNA1B-201ENST00000277549 PUS7Q96PZ0 661 aaKnown RBP23.98■■□□□ 1.43
CACNA1B-201ENST00000277549 RAPGEF2Q9Y4G8 1499 aa23.98■■□□□ 1.43
CACNA1B-201ENST00000277549 MPRIPQ6WCQ1 1025 aa23.98■■□□□ 1.43
CACNA1B-201ENST00000277549 CYP46A1Q9Y6A2 500 aa23.97■■□□□ 1.43
CACNA1B-201ENST00000277549 CLEC11AQ9Y240 323 aa23.97■■□□□ 1.43
CACNA1B-201ENST00000277549 CFAP70Q5T0N1 1121 aa23.97■■□□□ 1.43
CACNA1B-201ENST00000277549 BMP2KQ9NSY1 1161 aaPredicted RBP23.97■■□□□ 1.43
CACNA1B-201ENST00000277549 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.96■■□□□ 1.43
CACNA1B-201ENST00000277549 CABP1Q9NZU7 370 aa23.96■■□□□ 1.43
CACNA1B-201ENST00000277549 HIP1O00291 1037 aa23.96■■□□□ 1.43
CACNA1B-201ENST00000277549 METTL24Q5JXM2 366 aa23.96■■□□□ 1.43
CACNA1B-201ENST00000277549 CTNNBL1Q8WYA6 563 aaPredicted RBP23.96■■□□□ 1.43
CACNA1B-201ENST00000277549 MKNK2Q9HBH9 465 aa23.96■■□□□ 1.43
CACNA1B-201ENST00000277549 ADAMTS8Q9UP79 889 aa23.96■■□□□ 1.43
CACNA1B-201ENST00000277549 NUTM1Q86Y26 1132 aa23.96■■□□□ 1.43
CACNA1B-201ENST00000277549 MACROD2A1Z1Q3 448 aa23.96■■□□□ 1.43
CACNA1B-201ENST00000277549 AIDAQ96BJ3 306 aa23.96■■□□□ 1.43
CACNA1B-201ENST00000277549 SEC63Q9UGP8 760 aaKnown RBP23.96■■□□□ 1.43
CACNA1B-201ENST00000277549 TNMDQ9H2S6 317 aa23.95■■□□□ 1.43
CACNA1B-201ENST00000277549 ZNF622Q969S3 477 aaKnown RBP eCLIP23.95■■□□□ 1.42
CACNA1B-201ENST00000277549 RPGRQ92834 1020 aaKnown RBP23.94■■□□□ 1.42
CACNA1B-201ENST00000277549 TNIP1Q15025 636 aa23.94■■□□□ 1.42
CACNA1B-201ENST00000277549 CEP57L1Q8IYX8 460 aa23.94■■□□□ 1.42
CACNA1B-201ENST00000277549 LRRCC1Q9C099 1032 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms