RNA–Protein interactions for RNA: ENST00000274065.8

RPS3A-201, Transcript of ribosomal protein S3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS3A, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-201ENST00000274065 PMFBP1Q8TBY8 1022 aa12.64□□□□□ -0.39
RPS3A-201ENST00000274065 APBA3O96018 575 aa12.63□□□□□ -0.39
RPS3A-201ENST00000274065 RGL3Q3MIN7 710 aa12.63□□□□□ -0.39
RPS3A-201ENST00000274065 THSD7AQ9UPZ6 1657 aa12.63□□□□□ -0.39
RPS3A-201ENST00000274065 YTHDC2Q9H6S0 1430 aaKnown RBP12.62□□□□□ -0.39
RPS3A-201ENST00000274065 PLCG2P16885 1265 aa12.62□□□□□ -0.39
RPS3A-201ENST00000274065 KNDC1Q76NI1 1749 aa12.62□□□□□ -0.39
RPS3A-201ENST00000274065 RGPD8O14715 1765 aaPredicted RBP12.61□□□□□ -0.39
RPS3A-201ENST00000274065 ADGRB2O60241 1585 aa12.61□□□□□ -0.39
RPS3A-201ENST00000274065 PARD3Q8TEW0 1356 aa12.61□□□□□ -0.39
RPS3A-201ENST00000274065 FAM196AQ6ZSG2 479 aa12.61□□□□□ -0.39
RPS3A-201ENST00000274065 PPP1R1BQ9UD71 204 aaPredicted RBP12.61□□□□□ -0.39
RPS3A-201ENST00000274065 SAFB2Q14151 953 aaKnown RBP eCLIP12.6□□□□□ -0.39
RPS3A-201ENST00000274065 PPARGC1BQ86YN6 1023 aaKnown RBP12.6□□□□□ -0.39
RPS3A-201ENST00000274065 SIRT1Q96EB6 747 aa12.6□□□□□ -0.39
RPS3A-201ENST00000274065 SPON1Q9HCB6 807 aa12.6□□□□□ -0.39
RPS3A-201ENST00000274065 COL14A1Q05707 1796 aaKnown RBP12.6□□□□□ -0.39
RPS3A-201ENST00000274065 PIK3C2GO75747 1445 aa12.6□□□□□ -0.39
RPS3A-201ENST00000274065 SPATA31A1Q5TZJ5 1347 aa12.6□□□□□ -0.39
RPS3A-201ENST00000274065 OCEL1Q9H607 264 aa12.59□□□□□ -0.39
RPS3A-201ENST00000274065 IFT172Q9UG01 1749 aa12.59□□□□□ -0.39
RPS3A-201ENST00000274065 ANKRD30BQ9BXX2 1392 aa12.58□□□□□ -0.4
RPS3A-201ENST00000274065 NINLQ9Y2I6 1382 aa12.58□□□□□ -0.4
RPS3A-201ENST00000274065 KCNQ2O43526 872 aa12.58□□□□□ -0.4
RPS3A-201ENST00000274065 NBPF8Q3BBV2 869 aa12.58□□□□□ -0.4
RPS3A-201ENST00000274065 NBPF14Q5TI25 921 aa12.58□□□□□ -0.4
RPS3A-201ENST00000274065 SPATA31E1Q6ZUB1 1445 aa12.58□□□□□ -0.4
RPS3A-201ENST00000274065 PRDM11Q9NQV5 511 aa12.58□□□□□ -0.4
RPS3A-201ENST00000274065 CIZ1Q9ULV3 898 aaPredicted RBP12.58□□□□□ -0.4
RPS3A-201ENST00000274065 ZNF784Q8NCA9 323 aaPredicted RBP12.57□□□□□ -0.4
RPS3A-201ENST00000274065 PRAM1Q96QH2 718 aa12.57□□□□□ -0.4
RPS3A-201ENST00000274065 RREB1Q92766 1687 aa12.57□□□□□ -0.4
RPS3A-201ENST00000274065 NUP188Q5SRE5 1749 aa12.57□□□□□ -0.4
RPS3A-201ENST00000274065 TRPM3Q9HCF6 1732 aaPredicted RBP12.57□□□□□ -0.4
RPS3A-201ENST00000274065 PSEN1P49768 467 aa12.56□□□□□ -0.4
RPS3A-201ENST00000274065 CHRNA2Q15822 529 aa12.56□□□□□ -0.4
RPS3A-201ENST00000274065 ANKARQ7Z5J8 1434 aa12.55□□□□□ -0.4
RPS3A-201ENST00000274065 ALS2Q96Q42 1657 aa12.55□□□□□ -0.4
RPS3A-201ENST00000274065 CAMTA1Q9Y6Y1 1673 aa12.55□□□□□ -0.4
RPS3A-201ENST00000274065 C14orf93Q9H972 538 aaKnown RBP12.55□□□□□ -0.4
RPS3A-201ENST00000274065 STRN4Q9NRL3 753 aa12.55□□□□□ -0.4
RPS3A-201ENST00000274065 USP35Q9P2H5 1018 aa12.55□□□□□ -0.4
RPS3A-201ENST00000274065 ACIN1Q9UKV3 1341 aaKnown RBP12.55□□□□□ -0.4
RPS3A-201ENST00000274065 GPRASP1Q5JY77 1395 aa12.55□□□□□ -0.4
RPS3A-201ENST00000274065 KIAA0232Q92628 1395 aa12.55□□□□□ -0.4
RPS3A-201ENST00000274065 SENP3-EIF4A1A0A087X0R7 540 aa12.54□□□□□ -0.4
RPS3A-201ENST00000274065 POTEMA6NI47 508 aa12.54□□□□□ -0.4
RPS3A-201ENST00000274065 PDAP1Q13442 181 aaKnown RBP12.54□□□□□ -0.4
RPS3A-201ENST00000274065 CFAP70Q5T0N1 1121 aa12.54□□□□□ -0.4
RPS3A-201ENST00000274065 LCE2DQ5TA82 110 aaPredicted RBP12.54□□□□□ -0.4
RPS3A-201ENST00000274065 PRR36Q9H6K5 1346 aa12.54□□□□□ -0.4
RPS3A-201ENST00000274065 PDE3BQ13370 1112 aa12.53□□□□□ -0.4
RPS3A-201ENST00000274065 HIRIP3Q9BW71 556 aaPredicted RBP12.53□□□□□ -0.4
RPS3A-201ENST00000274065 CRYBG1Q9Y4K1 1723 aa12.52□□□□□ -0.41
RPS3A-201ENST00000274065 IFFO2Q5TF58 517 aa12.52□□□□□ -0.41
RPS3A-201ENST00000274065 POTEGQ6S5H5 508 aa12.52□□□□□ -0.41
RPS3A-201ENST00000274065 DHX57Q6P158 1386 aaKnown RBP12.52□□□□□ -0.41
RPS3A-201ENST00000274065 ZC3H6P61129 1189 aaKnown RBP12.51□□□□□ -0.41
RPS3A-201ENST00000274065 BARGINQ6ZT62 677 aa12.51□□□□□ -0.41
RPS3A-201ENST00000274065 PDGFDQ9GZP0 370 aaPredicted RBP12.51□□□□□ -0.41
RPS3A-201ENST00000274065 ANO8Q9HCE9 1232 aaPredicted RBP12.51□□□□□ -0.41
RPS3A-201ENST00000274065 POGKQ9P215 609 aa12.51□□□□□ -0.41
RPS3A-201ENST00000274065 PDCD7Q8N8D1 485 aaKnown RBP12.5□□□□□ -0.41
RPS3A-201ENST00000274065 NGDNQ8NEJ9 315 aaKnown RBP12.5□□□□□ -0.41
RPS3A-201ENST00000274065 SSH2Q76I76 1423 aa12.49□□□□□ -0.41
RPS3A-201ENST00000274065 C1QTNF8P60827 252 aa12.49□□□□□ -0.41
RPS3A-201ENST00000274065 LARP1Q6PKG0 1096 aaKnown RBP12.49□□□□□ -0.41
RPS3A-201ENST00000274065 CEP350Q5VT06 3117 aa12.48□□□□□ -0.41
RPS3A-201ENST00000274065 NRKQ7Z2Y5 1582 aa12.48□□□□□ -0.41
RPS3A-201ENST00000274065 MINK1Q8N4C8 1332 aaPredicted RBP12.48□□□□□ -0.41
RPS3A-201ENST00000274065 ZBTB7AO95365 584 aa12.48□□□□□ -0.41
RPS3A-201ENST00000274065 EVA1CP58658 441 aa12.48□□□□□ -0.41
RPS3A-201ENST00000274065 GOLGA2Q08379 1002 aa12.48□□□□□ -0.41
RPS3A-201ENST00000274065 MKRN3Q13064 507 aaKnown RBP12.48□□□□□ -0.41
RPS3A-201ENST00000274065 NUTM2GQ5VZR2 741 aa12.48□□□□□ -0.41
RPS3A-201ENST00000274065 DLC1Q96QB1 1528 aa12.47□□□□□ -0.41
RPS3A-201ENST00000274065 PTGER2P43116 358 aa12.47□□□□□ -0.41
RPS3A-201ENST00000274065 TCP11L2Q8N4U5 519 aa12.47□□□□□ -0.41
RPS3A-201ENST00000274065 TULP4Q9NRJ4 1543 aa12.47□□□□□ -0.41
RPS3A-201ENST00000274065 WASLO00401 505 aaPredicted RBP12.46□□□□□ -0.41
RPS3A-201ENST00000274065 SLAIN1Q8ND83 568 aa12.46□□□□□ -0.41
RPS3A-201ENST00000274065 FAM163AQ96GL9 167 aaPredicted RBP12.46□□□□□ -0.41
RPS3A-201ENST00000274065 TRAK1Q9UPV9 953 aa12.46□□□□□ -0.41
RPS3A-201ENST00000274065 PTF1AQ7RTS3 328 aa12.45□□□□□ -0.42
RPS3A-201ENST00000274065 CASZ1Q86V15 1759 aa12.45□□□□□ -0.42
RPS3A-201ENST00000274065 EIF3AQ14152 1382 aaKnown RBP12.44□□□□□ -0.42
RPS3A-201ENST00000274065 PHRF1Q9P1Y6 1649 aaKnown RBP12.44□□□□□ -0.42
RPS3A-201ENST00000274065 PLSCR1O15162 318 aa12.44□□□□□ -0.42
RPS3A-201ENST00000274065 MPHOSPH9Q99550 1183 aa12.44□□□□□ -0.42
RPS3A-201ENST00000274065 SYT17Q9BSW7 474 aa12.44□□□□□ -0.42
RPS3A-201ENST00000274065 FHDC1Q9C0D6 1143 aaPredicted RBP12.44□□□□□ -0.42
RPS3A-201ENST00000274065 MYOM1P52179 1685 aa12.44□□□□□ -0.42
RPS3A-201ENST00000274065 GOLGB1Q14789 3259 aaKnown RBP12.43□□□□□ -0.42
RPS3A-201ENST00000274065 ADGRB1O14514 1584 aa12.43□□□□□ -0.42
RPS3A-201ENST00000274065 BCL11BQ9C0K0 894 aaPredicted RBP12.42□□□□□ -0.42
RPS3A-201ENST00000274065 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.42□□□□□ -0.426e-12■□□□□ 9.5
RPS3A-201ENST00000274065 THRAP3Q9Y2W1 955 aaKnown RBP12.42□□□□□ -0.42
RPS3A-201ENST00000274065 OVOS2A0A0G2JMS6 1433 aa12.42□□□□□ -0.42
RPS3A-201ENST00000274065 OVOS2A0A0J9YW53 1432 aa12.42□□□□□ -0.42
RPS3A-201ENST00000274065 OVOS2Q6IE36 1432 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms