RNA–Protein interactions for RNA: ENST00000269844.4

PRDM15-201, Transcript of PR/SET domain 15, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM15, Length 4,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-201ENST00000269844 GTF3C6Q969F1 213 aa17.03■□□□□ 0.32
PRDM15-201ENST00000269844 CEP89Q96ST8 783 aa17.03■□□□□ 0.32
PRDM15-201ENST00000269844 RBM28Q9NW13 759 aaKnown RBP17.03■□□□□ 0.32
PRDM15-201ENST00000269844 CEP57L1Q8IYX8 460 aa17.03■□□□□ 0.32
PRDM15-201ENST00000269844 NEFHP12036 1026 aa17.03■□□□□ 0.32
PRDM15-201ENST00000269844 UACAQ9BZF9 1416 aa17.03■□□□□ 0.32
PRDM15-201ENST00000269844 CHD1LQ86WJ1 897 aa17.03■□□□□ 0.32
PRDM15-201ENST00000269844 SNW1Q13573 536 aaKnown RBP17.02■□□□□ 0.32
PRDM15-201ENST00000269844 SMTNL1A8MU46 457 aa17.02■□□□□ 0.31
PRDM15-201ENST00000269844 ERC2O15083 957 aa17.02■□□□□ 0.31
PRDM15-201ENST00000269844 CEBPZQ03701 1054 aaKnown RBP17.02■□□□□ 0.31
PRDM15-201ENST00000269844 SYNE3Q6ZMZ3 975 aa17.02■□□□□ 0.31
PRDM15-201ENST00000269844 ZNF622Q969S3 477 aaKnown RBP eCLIP17.02■□□□□ 0.31
PRDM15-201ENST00000269844 SMARCE1Q969G3 411 aa17.01■□□□□ 0.31
PRDM15-201ENST00000269844 ARFGAP3Q9NP61 516 aa17.01■□□□□ 0.31
PRDM15-201ENST00000269844 RIOK3O14730 519 aaKnown RBP17.01■□□□□ 0.31
PRDM15-201ENST00000269844 SLU7O95391 586 aaKnown RBP17.01■□□□□ 0.31
PRDM15-201ENST00000269844 AMPHP49418 695 aa17.01■□□□□ 0.31
PRDM15-201ENST00000269844 MVPQ14764 893 aaKnown RBP17.01■□□□□ 0.31
PRDM15-201ENST00000269844 KIF3BO15066 747 aa17.01■□□□□ 0.31
PRDM15-201ENST00000269844 UPF3BQ9BZI7 483 aaKnown RBP17.01■□□□□ 0.31
PRDM15-201ENST00000269844 CCDC171Q6TFL3 1326 aa17■□□□□ 0.31
PRDM15-201ENST00000269844 PAIP2Q9BPZ3 127 aaKnown RBP17■□□□□ 0.31
PRDM15-201ENST00000269844 GDPD2Q9HCC8 539 aa17■□□□□ 0.31
PRDM15-201ENST00000269844 ZSCAN12O43309 604 aa17■□□□□ 0.31
PRDM15-201ENST00000269844 ZRSR2Q15696 482 aaKnown RBP17■□□□□ 0.31
PRDM15-201ENST00000269844 MYO6Q9UM54 1294 aa17■□□□□ 0.31
PRDM15-201ENST00000269844 BCL2L12Q9HB09 334 aa16.99■□□□□ 0.31
PRDM15-201ENST00000269844 MAP2K2P36507 400 aa16.99■□□□□ 0.31
PRDM15-201ENST00000269844 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.99■□□□□ 0.31
PRDM15-201ENST00000269844 GOLIM4O00461 696 aa16.99■□□□□ 0.31
PRDM15-201ENST00000269844 CASQ1P31415 396 aa16.99■□□□□ 0.31
PRDM15-201ENST00000269844 CPSF2Q9P2I0 782 aaKnown RBP16.99■□□□□ 0.31
PRDM15-201ENST00000269844 RUSC2Q8N2Y8 1516 aa16.99■□□□□ 0.31
PRDM15-201ENST00000269844 ODF2Q5BJF6 829 aa16.99■□□□□ 0.31
PRDM15-201ENST00000269844 KIAA1328Q86T90 577 aa16.99■□□□□ 0.31
PRDM15-201ENST00000269844 SPATA32Q96LK8 384 aa16.98■□□□□ 0.31
PRDM15-201ENST00000269844 MAP9Q49MG5 647 aa16.98■□□□□ 0.31
PRDM15-201ENST00000269844 CBFA2T2O43439 604 aa16.98■□□□□ 0.31
PRDM15-201ENST00000269844 CCDC186Q7Z3E2 898 aa16.98■□□□□ 0.31
PRDM15-201ENST00000269844 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.98■□□□□ 0.31
PRDM15-201ENST00000269844 CPLX1O14810 134 aa16.97■□□□□ 0.31
PRDM15-201ENST00000269844 CEP57Q86XR8 500 aa16.97■□□□□ 0.31
PRDM15-201ENST00000269844 C1orf115Q9H7X2 142 aa16.97■□□□□ 0.31
PRDM15-201ENST00000269844 ROCK1Q13464 1354 aa16.97■□□□□ 0.31
PRDM15-201ENST00000269844 AKAP17AQ02040 695 aaKnown RBP16.97■□□□□ 0.31
PRDM15-201ENST00000269844 PDS5BQ9NTI5 1447 aa16.97■□□□□ 0.31
PRDM15-201ENST00000269844 ZNF500O60304 480 aaPredicted RBP16.97■□□□□ 0.31
PRDM15-201ENST00000269844 MARCH6O60337 910 aa16.97■□□□□ 0.31
PRDM15-201ENST00000269844 STAC3Q96MF2 364 aa16.97■□□□□ 0.31
PRDM15-201ENST00000269844 RAB3GAP1Q15042 981 aa16.96■□□□□ 0.31
PRDM15-201ENST00000269844 RBSNQ9H1K0 784 aa16.96■□□□□ 0.31
PRDM15-201ENST00000269844 EZRP15311 586 aaKnown RBP16.96■□□□□ 0.31
PRDM15-201ENST00000269844 MCM6Q14566 821 aa16.96■□□□□ 0.31
PRDM15-201ENST00000269844 LARP1BQ659C4 914 aaKnown RBP16.96■□□□□ 0.31
PRDM15-201ENST00000269844 PIBF1Q8WXW3 757 aa16.96■□□□□ 0.31
PRDM15-201ENST00000269844 PPFIBP1Q86W92 1011 aa16.96■□□□□ 0.31
PRDM15-201ENST00000269844 MPHOSPH10O00566 681 aaKnown RBP16.96■□□□□ 0.3
PRDM15-201ENST00000269844 BRPF1P55201 1214 aaPredicted RBP16.96■□□□□ 0.3
PRDM15-201ENST00000269844 LRCH2Q5VUJ6 765 aa16.95■□□□□ 0.3
PRDM15-201ENST00000269844 FILIP1LQ4L180 1135 aa16.95■□□□□ 0.3
PRDM15-201ENST00000269844 CPLX2Q6PUV4 134 aaKnown RBP16.95■□□□□ 0.3
PRDM15-201ENST00000269844 RBM33Q96EV2 1170 aaKnown RBP16.95■□□□□ 0.3
PRDM15-201ENST00000269844 ARHGAP29Q52LW3 1261 aa16.95■□□□□ 0.3
PRDM15-201ENST00000269844 PPM1EQ8WY54 764 aa16.95■□□□□ 0.3
PRDM15-201ENST00000269844 IGHDP01880 384 aa16.95■□□□□ 0.3
PRDM15-201ENST00000269844 LUZP1Q86V48 1076 aa16.95■□□□□ 0.3
PRDM15-201ENST00000269844 POTEB2H3BUK9 544 aa16.94■□□□□ 0.3
PRDM15-201ENST00000269844 ATP6V1AP38606 617 aa16.94■□□□□ 0.3
PRDM15-201ENST00000269844 CKAP2LQ8IYA6 745 aa16.94■□□□□ 0.3
PRDM15-201ENST00000269844 RIPK4P57078 832 aa16.94■□□□□ 0.3
PRDM15-201ENST00000269844 TRIM29Q14134 588 aa16.94■□□□□ 0.3
PRDM15-201ENST00000269844 A0A1B0GUA9 196 aa16.94■□□□□ 0.3
PRDM15-201ENST00000269844 KIF4BQ2VIQ3 1234 aa16.94■□□□□ 0.3
PRDM15-201ENST00000269844 GSDMDP57764 484 aa16.93■□□□□ 0.3
PRDM15-201ENST00000269844 SLFN5Q08AF3 891 aa16.93■□□□□ 0.3
PRDM15-201ENST00000269844 TCP11L2Q8N4U5 519 aa16.93■□□□□ 0.3
PRDM15-201ENST00000269844 SRRTQ9BXP5 876 aaKnown RBP16.93■□□□□ 0.3
PRDM15-201ENST00000269844 PPP2R1AP30153 589 aa16.93■□□□□ 0.3
PRDM15-201ENST00000269844 RRBP1Q9P2E9 1410 aaKnown RBP16.93■□□□□ 0.3
PRDM15-201ENST00000269844 EBAG9O00559 213 aa16.93■□□□□ 0.3
PRDM15-201ENST00000269844 VPS18Q9P253 973 aa16.93■□□□□ 0.3
PRDM15-201ENST00000269844 PSMA5P28066 241 aa16.92■□□□□ 0.3
PRDM15-201ENST00000269844 ME1P48163 572 aa16.92■□□□□ 0.3
PRDM15-201ENST00000269844 NAA25Q14CX7 972 aa16.92■□□□□ 0.3
PRDM15-201ENST00000269844 CFAP100Q494V2 611 aa16.92■□□□□ 0.3
PRDM15-201ENST00000269844 CCDC181Q5TID7 509 aa16.92■□□□□ 0.3
PRDM15-201ENST00000269844 IQCEQ6IPM2 695 aa16.92■□□□□ 0.3
PRDM15-201ENST00000269844 C17orf53Q8N3J3 647 aaPredicted RBP16.92■□□□□ 0.3
PRDM15-201ENST00000269844 ZNF396Q96N95 335 aaPredicted RBP16.92■□□□□ 0.3
PRDM15-201ENST00000269844 SKILP12757 684 aa16.92■□□□□ 0.3
PRDM15-201ENST00000269844 ZSWIM4Q9H7M6 989 aa16.91■□□□□ 0.3
PRDM15-201ENST00000269844 MCM3P25205 808 aa16.91■□□□□ 0.3
PRDM15-201ENST00000269844 PPP1R9BQ96SB3 815 aa16.91■□□□□ 0.3
PRDM15-201ENST00000269844 STK38Q15208 465 aa16.91■□□□□ 0.3
PRDM15-201ENST00000269844 EXOSC9Q06265 439 aaKnown RBP16.91■□□□□ 0.3
PRDM15-201ENST00000269844 LRRFIP1Q32MZ4 808 aaKnown RBP16.91■□□□□ 0.3
PRDM15-201ENST00000269844 NOB1Q9ULX3 412 aaKnown RBP16.91■□□□□ 0.3
PRDM15-201ENST00000269844 GIMAP6Q6P9H5 292 aa16.9■□□□□ 0.3
PRDM15-201ENST00000269844 BICRAQ9NZM4 1560 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms