RNA–Protein interactions for RNA: ENST00000260777.14

SHTN1-201, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 5,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-201ENST00000260777 SART3Q15020 963 aaKnown RBP18.91■□□□□ 0.62
SHTN1-201ENST00000260777 ALDH1L2Q3SY69 923 aa18.91■□□□□ 0.62
SHTN1-201ENST00000260777 TBC1D2BQ9UPU7 963 aa18.91■□□□□ 0.62
SHTN1-201ENST00000260777 LRPPRCP42704 1394 aaKnown RBP18.91■□□□□ 0.62
SHTN1-201ENST00000260777 KRT85P78386 507 aa18.91■□□□□ 0.62
SHTN1-201ENST00000260777 PDILTQ8N807 584 aa18.9■□□□□ 0.62
SHTN1-201ENST00000260777 ZSCAN31Q96LW9 406 aaPredicted RBP18.9■□□□□ 0.62
SHTN1-201ENST00000260777 ESPNB1AK53 854 aa18.9■□□□□ 0.62
SHTN1-201ENST00000260777 SMC2O95347 1197 aa18.9■□□□□ 0.62
SHTN1-201ENST00000260777 HSP90B2PQ58FF3 399 aa18.9■□□□□ 0.62
SHTN1-201ENST00000260777 AK7Q96M32 723 aa18.89■□□□□ 0.62
SHTN1-201ENST00000260777 PDIA4P13667 645 aaKnown RBP18.89■□□□□ 0.61
SHTN1-201ENST00000260777 ARHGEF11O15085 1522 aa18.89■□□□□ 0.61
SHTN1-201ENST00000260777 SYTL4Q96C24 671 aaPredicted RBP18.89■□□□□ 0.61
SHTN1-201ENST00000260777 ATF3P18847 181 aa18.89■□□□□ 0.61
SHTN1-201ENST00000260777 STK38Q15208 465 aa18.89■□□□□ 0.61
SHTN1-201ENST00000260777 TNMDQ9H2S6 317 aa18.88■□□□□ 0.61
SHTN1-201ENST00000260777 RUFY1Q96T51 708 aa18.88■□□□□ 0.61
SHTN1-201ENST00000260777 TRIM34Q9BYJ4 488 aa18.88■□□□□ 0.61
SHTN1-201ENST00000260777 JMYQ8N9B5 988 aa18.87■□□□□ 0.61
SHTN1-201ENST00000260777 LARP1BQ659C4 914 aaKnown RBP18.86■□□□□ 0.61
SHTN1-201ENST00000260777 NCBP3Q53F19 620 aaKnown RBP18.86■□□□□ 0.61
SHTN1-201ENST00000260777 SPC24Q8NBT2 197 aa18.86■□□□□ 0.61
SHTN1-201ENST00000260777 KIF14Q15058 1648 aa18.86■□□□□ 0.61
SHTN1-201ENST00000260777 DUSP27Q5VZP5 1158 aa18.85■□□□□ 0.61
SHTN1-201ENST00000260777 ERCC4Q92889 916 aaPredicted RBP18.85■□□□□ 0.61
SHTN1-201ENST00000260777 PDRG1Q9NUG6 133 aa18.85■□□□□ 0.61
SHTN1-201ENST00000260777 CCDC158Q5M9N0 1113 aa18.85■□□□□ 0.61
SHTN1-201ENST00000260777 SSH1Q8WYL5 1049 aa18.85■□□□□ 0.61
SHTN1-201ENST00000260777 FILIP1LQ4L180 1135 aa18.84■□□□□ 0.61
SHTN1-201ENST00000260777 NOM1Q5C9Z4 860 aaKnown RBP18.84■□□□□ 0.61
SHTN1-201ENST00000260777 SRGAP3O43295 1099 aa18.84■□□□□ 0.61
SHTN1-201ENST00000260777 CDR1P51861 262 aa18.84■□□□□ 0.61
SHTN1-201ENST00000260777 BLOC1S2Q6QNY1 142 aa18.84■□□□□ 0.61
SHTN1-201ENST00000260777 RAD21O60216 631 aa18.83■□□□□ 0.61
SHTN1-201ENST00000260777 SMARCE1Q969G3 411 aa18.83■□□□□ 0.61
SHTN1-201ENST00000260777 PPP6R1Q9UPN7 881 aa18.83■□□□□ 0.61
SHTN1-201ENST00000260777 MAP4K4O95819 1239 aaPredicted RBP18.83■□□□□ 0.6
SHTN1-201ENST00000260777 RBM10P98175 930 aaKnown RBP18.83■□□□□ 0.6
SHTN1-201ENST00000260777 CEBPZQ03701 1054 aaKnown RBP18.83■□□□□ 0.6
SHTN1-201ENST00000260777 FMNL2Q96PY5 1086 aa18.83■□□□□ 0.6
SHTN1-201ENST00000260777 NAP1L1P55209 391 aaKnown RBP18.82■□□□□ 0.6
SHTN1-201ENST00000260777 RRS1Q15050 365 aaKnown RBP18.82■□□□□ 0.6
SHTN1-201ENST00000260777 ESCO1Q5FWF5 840 aa18.82■□□□□ 0.6
SHTN1-201ENST00000260777 TTC39AQ5SRH9 613 aa18.82■□□□□ 0.6
SHTN1-201ENST00000260777 TCEAL9Q9UHQ7 104 aa18.82■□□□□ 0.6
SHTN1-201ENST00000260777 PIP4K2AP48426 406 aaPredicted RBP18.82■□□□□ 0.6
SHTN1-201ENST00000260777 ZSCAN30Q86W11 494 aa18.82■□□□□ 0.6
SHTN1-201ENST00000260777 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.82■□□□□ 0.63e-7■■□□□ 13.3
SHTN1-201ENST00000260777 ANO8Q9HCE9 1232 aaPredicted RBP18.82■□□□□ 0.6
SHTN1-201ENST00000260777 ZNF530Q6P9A1 599 aaPredicted RBP18.82■□□□□ 0.6
SHTN1-201ENST00000260777 TATP17735 454 aaPredicted RBP18.82■□□□□ 0.6
SHTN1-201ENST00000260777 KIF6Q6ZMV9 814 aa18.82■□□□□ 0.6
SHTN1-201ENST00000260777 BIVM-ERCC5R4GMW8 1640 aa18.82■□□□□ 0.6
SHTN1-201ENST00000260777 STK3Q13188 491 aa18.81■□□□□ 0.6
SHTN1-201ENST00000260777 KRT32Q14532 448 aa18.81■□□□□ 0.6
SHTN1-201ENST00000260777 AACSQ86V21 672 aa18.81■□□□□ 0.6
SHTN1-201ENST00000260777 JAKMIP1Q96N16 626 aaKnown RBP18.81■□□□□ 0.6
SHTN1-201ENST00000260777 CCDC66A2RUB6 948 aa18.81■□□□□ 0.6
SHTN1-201ENST00000260777 SPATA32Q96LK8 384 aa18.81■□□□□ 0.6
SHTN1-201ENST00000260777 SCAF11Q99590 1463 aaKnown RBP18.81■□□□□ 0.6
SHTN1-201ENST00000260777 CFAP45Q9UL16 551 aa18.81■□□□□ 0.6
SHTN1-201ENST00000260777 ME1P48163 572 aa18.8■□□□□ 0.6
SHTN1-201ENST00000260777 CCDC112Q8NEF3 446 aa18.8■□□□□ 0.6
SHTN1-201ENST00000260777 NUP62CLQ9H1M0 184 aa18.8■□□□□ 0.6
SHTN1-201ENST00000260777 CWC15Q9P013 229 aaKnown RBP18.8■□□□□ 0.6
SHTN1-201ENST00000260777 UQCRHLA0A096LP55 91 aa18.8■□□□□ 0.6
SHTN1-201ENST00000260777 UQCRHP07919 91 aa18.8■□□□□ 0.6
SHTN1-201ENST00000260777 MAPKBP1O60336 1514 aa18.8■□□□□ 0.6
SHTN1-201ENST00000260777 TBC1D2Q9BYX2 928 aa18.8■□□□□ 0.6
SHTN1-201ENST00000260777 SKAP1Q86WV1 359 aa18.8■□□□□ 0.6
SHTN1-201ENST00000260777 CWC27Q6UX04 472 aaKnown RBP18.79■□□□□ 0.6
SHTN1-201ENST00000260777 RBM33Q96EV2 1170 aaKnown RBP18.79■□□□□ 0.6
SHTN1-201ENST00000260777 BCL11BQ9C0K0 894 aaPredicted RBP18.79■□□□□ 0.6
SHTN1-201ENST00000260777 DACH1Q9UI36 760 aa18.79■□□□□ 0.6
SHTN1-201ENST00000260777 CAGE1Q8TC20 777 aa18.79■□□□□ 0.6
SHTN1-201ENST00000260777 SIL1Q9H173 461 aa18.79■□□□□ 0.6
SHTN1-201ENST00000260777 FAM135AQ9P2D6 1515 aa18.79■□□□□ 0.6
SHTN1-201ENST00000260777 FYB1O15117 783 aa18.79■□□□□ 0.6
SHTN1-201ENST00000260777 RRP9O43818 475 aaKnown RBP18.78■□□□□ 0.6
SHTN1-201ENST00000260777 RAB11FIP3O75154 756 aa18.78■□□□□ 0.6
SHTN1-201ENST00000260777 MX1P20591 662 aa18.78■□□□□ 0.6
SHTN1-201ENST00000260777 TXLNAP40222 546 aa18.78■□□□□ 0.6
SHTN1-201ENST00000260777 IL1RAPL2Q9NP60 686 aa18.78■□□□□ 0.6
SHTN1-201ENST00000260777 SERPINC1P01008 464 aa18.78■□□□□ 0.6
SHTN1-201ENST00000260777 NSD2O96028 1365 aa18.78■□□□□ 0.6
SHTN1-201ENST00000260777 DHX29Q7Z478 1369 aaKnown RBP18.78■□□□□ 0.6
SHTN1-201ENST00000260777 PLEKHH1Q9ULM0 1364 aa18.78■□□□□ 0.6
SHTN1-201ENST00000260777 CCDC61Q9Y6R9 512 aa18.78■□□□□ 0.6
SHTN1-201ENST00000260777 PLB1Q6P1J6 1458 aa18.77■□□□□ 0.6
SHTN1-201ENST00000260777 LAMC3Q9Y6N6 1575 aa18.77■□□□□ 0.59
SHTN1-201ENST00000260777 SYCE3A1L190 88 aa18.76■□□□□ 0.59
SHTN1-201ENST00000260777 CBFA2T2O43439 604 aa18.76■□□□□ 0.59
SHTN1-201ENST00000260777 SLC3A2P08195 630 aaKnown RBP18.76■□□□□ 0.59
SHTN1-201ENST00000260777 ATP2B1P20020 1258 aa18.76■□□□□ 0.59
SHTN1-201ENST00000260777 THEMISQ8N1K5 641 aaPredicted RBP18.76■□□□□ 0.59
SHTN1-201ENST00000260777 NUDT16Q96DE0 195 aaKnown RBP18.76■□□□□ 0.59
SHTN1-201ENST00000260777 GNAT3A8MTJ3 354 aa18.76■□□□□ 0.59
SHTN1-201ENST00000260777 KDM4AO75164 1064 aa18.76■□□□□ 0.59
SHTN1-201ENST00000260777 KIF1BPQ96EK5 621 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms