RNA–Protein interactions for RNA: ENST00000258418.9

CAB39-201, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 3,826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-201ENST00000258418 FGD1P98174 961 aa18.11■□□□□ 0.49
CAB39-201ENST00000258418 TBC1D9Q6ZT07 1266 aa18.11■□□□□ 0.49
CAB39-201ENST00000258418 CLTCL1P53675 1640 aa18.11■□□□□ 0.49
CAB39-201ENST00000258418 NEK4P51957 841 aa18.11■□□□□ 0.49
CAB39-201ENST00000258418 OTUD7AQ8TE49 926 aaPredicted RBP18.11■□□□□ 0.49
CAB39-201ENST00000258418 ZBTB40Q9NUA8 1239 aa18.11■□□□□ 0.49
CAB39-201ENST00000258418 EIF4A2Q14240 407 aaKnown RBP18.1■□□□□ 0.49
CAB39-201ENST00000258418 YTHDC2Q9H6S0 1430 aaKnown RBP18.1■□□□□ 0.49
CAB39-201ENST00000258418 DDX11L8A8MPP1 907 aa18.1■□□□□ 0.49
CAB39-201ENST00000258418 CFAP44Q96MT7 982 aa18.1■□□□□ 0.49
CAB39-201ENST00000258418 IFT57Q9NWB7 429 aa18.1■□□□□ 0.49
CAB39-201ENST00000258418 HDGFL1Q5TGJ6 251 aa18.1■□□□□ 0.49
CAB39-201ENST00000258418 INTS3Q68E01 1043 aaKnown RBP18.1■□□□□ 0.49
CAB39-201ENST00000258418 MPNDQ8N594 471 aa18.09■□□□□ 0.49
CAB39-201ENST00000258418 LARP6Q9BRS8 491 aaKnown RBP18.09■□□□□ 0.49
CAB39-201ENST00000258418 C9orf78Q9NZ63 289 aaPredicted RBP18.09■□□□□ 0.49
CAB39-201ENST00000258418 DDX54Q8TDD1 881 aaKnown RBP18.09■□□□□ 0.49
CAB39-201ENST00000258418 TRPM2O94759 1503 aa18.09■□□□□ 0.49
CAB39-201ENST00000258418 ZFYVE16Q7Z3T8 1539 aa18.09■□□□□ 0.49
CAB39-201ENST00000258418 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.08■□□□□ 0.49
CAB39-201ENST00000258418 MRPL50Q8N5N7 158 aaKnown RBP18.08■□□□□ 0.49
CAB39-201ENST00000258418 UBTFL1P0CB47 393 aaPredicted RBP18.08■□□□□ 0.48
CAB39-201ENST00000258418 ALDH1L2Q3SY69 923 aa18.08■□□□□ 0.48
CAB39-201ENST00000258418 PPIP5K1Q6PFW1 1433 aa18.08■□□□□ 0.48
CAB39-201ENST00000258418 DTNBO60941 627 aa18.08■□□□□ 0.48
CAB39-201ENST00000258418 DNTTIP2Q5QJE6 756 aaKnown RBP18.07■□□□□ 0.48
CAB39-201ENST00000258418 NUTM1Q86Y26 1132 aa18.07■□□□□ 0.48
CAB39-201ENST00000258418 UPF3BQ9BZI7 483 aaKnown RBP18.07■□□□□ 0.48
CAB39-201ENST00000258418 INSRP06213 1382 aa18.07■□□□□ 0.48
CAB39-201ENST00000258418 IQGAP3Q86VI3 1631 aa18.06■□□□□ 0.48
CAB39-201ENST00000258418 RNF214Q8ND24 703 aa18.06■□□□□ 0.48
CAB39-201ENST00000258418 NSD2O96028 1365 aa18.06■□□□□ 0.48
CAB39-201ENST00000258418 REC8O95072 547 aa18.06■□□□□ 0.48
CAB39-201ENST00000258418 NUCB1Q02818 461 aa18.06■□□□□ 0.48
CAB39-201ENST00000258418 C1orf141Q5JVX7 400 aa18.06■□□□□ 0.48
CAB39-201ENST00000258418 ABCC11Q96J66 1382 aa18.05■□□□□ 0.48
CAB39-201ENST00000258418 SSFA2P28290 1259 aa18.05■□□□□ 0.48
CAB39-201ENST00000258418 CAVIN1Q6NZI2 390 aaKnown RBP18.05■□□□□ 0.48
CAB39-201ENST00000258418 PANK2Q9BZ23 570 aa18.05■□□□□ 0.48
CAB39-201ENST00000258418 POGZQ7Z3K3 1410 aa18.05■□□□□ 0.48
CAB39-201ENST00000258418 HDAC1Q13547 482 aaPredicted RBP18.05■□□□□ 0.48
CAB39-201ENST00000258418 G2E3Q7L622 706 aa18.05■□□□□ 0.48
CAB39-201ENST00000258418 RIMS2Q9UQ26 1411 aa18.04■□□□□ 0.48
CAB39-201ENST00000258418 GNAI2P04899 355 aa18.04■□□□□ 0.48
CAB39-201ENST00000258418 PLEKHF1Q96S99 279 aa18.04■□□□□ 0.48
CAB39-201ENST00000258418 TTC21BQ7Z4L5 1316 aa18.04■□□□□ 0.48
CAB39-201ENST00000258418 K7ELQ4 463 aaPredicted RBP18.04■□□□□ 0.48
CAB39-201ENST00000258418 ZC3H6P61129 1189 aaKnown RBP18.04■□□□□ 0.48
CAB39-201ENST00000258418 NLRP2Q9NX02 1062 aa18.04■□□□□ 0.48
CAB39-201ENST00000258418 PRPF40AO75400 957 aaKnown RBP18.03■□□□□ 0.48
CAB39-201ENST00000258418 KDM5AP29375 1690 aaKnown RBP18.03■□□□□ 0.48
CAB39-201ENST00000258418 GAS2L2Q8NHY3 880 aa18.03■□□□□ 0.48
CAB39-201ENST00000258418 SMC5Q8IY18 1101 aa18.03■□□□□ 0.48
CAB39-201ENST00000258418 SIL1Q9H173 461 aa18.03■□□□□ 0.48
CAB39-201ENST00000258418 ZBTB7BO15156 539 aaPredicted RBP18.02■□□□□ 0.48
CAB39-201ENST00000258418 CCDC30Q5VVM6 783 aa18.02■□□□□ 0.48
CAB39-201ENST00000258418 E9PCH4 1651 aa18.02■□□□□ 0.48
CAB39-201ENST00000258418 IL13P35225 146 aa18.02■□□□□ 0.48
CAB39-201ENST00000258418 TNPO1Q92973 898 aaKnown RBP18.02■□□□□ 0.47
CAB39-201ENST00000258418 UNC13BO14795 1591 aa18.01■□□□□ 0.47
CAB39-201ENST00000258418 MTHFSDQ2M296 383 aaKnown RBP18.01■□□□□ 0.47
CAB39-201ENST00000258418 MPRIPQ6WCQ1 1025 aa18.01■□□□□ 0.47
CAB39-201ENST00000258418 ZNF530Q6P9A1 599 aaPredicted RBP18.01■□□□□ 0.47
CAB39-201ENST00000258418 MSNP26038 577 aaKnown RBP18■□□□□ 0.47
CAB39-201ENST00000258418 LRRFIP2Q9Y608 721 aaKnown RBP18■□□□□ 0.47
CAB39-201ENST00000258418 SRGAP3O43295 1099 aa17.99■□□□□ 0.47
CAB39-201ENST00000258418 FOSBP53539 338 aa17.99■□□□□ 0.47
CAB39-201ENST00000258418 DIAPH3Q9NSV4 1193 aa17.99■□□□□ 0.47
CAB39-201ENST00000258418 IL16Q14005 1332 aa17.99■□□□□ 0.47
CAB39-201ENST00000258418 PLXNC1O60486 1568 aa17.99■□□□□ 0.47
CAB39-201ENST00000258418 SYNMO15061 1565 aa17.98■□□□□ 0.47
CAB39-201ENST00000258418 MYL6BP14649 208 aa17.98■□□□□ 0.47
CAB39-201ENST00000258418 JARID2Q92833 1246 aaPredicted RBP17.98■□□□□ 0.47
CAB39-201ENST00000258418 UHRF1BP1LA0JNW5 1464 aa17.98■□□□□ 0.47
CAB39-201ENST00000258418 BMP2KLQ5H9B9 411 aa17.98■□□□□ 0.47
CAB39-201ENST00000258418 LRRCC1Q9C099 1032 aa17.98■□□□□ 0.47
CAB39-201ENST00000258418 MADDQ8WXG6 1647 aa17.98■□□□□ 0.47
CAB39-201ENST00000258418 SDSP20132 328 aa17.97■□□□□ 0.47
CAB39-201ENST00000258418 FLIIQ13045 1269 aa17.97■□□□□ 0.47
CAB39-201ENST00000258418 THEMISQ8N1K5 641 aaPredicted RBP17.97■□□□□ 0.47
CAB39-201ENST00000258418 MAP3K19Q56UN5 1328 aa17.97■□□□□ 0.47
CAB39-201ENST00000258418 GNAI3P08754 354 aa17.97■□□□□ 0.47
CAB39-201ENST00000258418 GNAT3A8MTJ3 354 aa17.96■□□□□ 0.47
CAB39-201ENST00000258418 IFIT2P09913 472 aaKnown RBP17.96■□□□□ 0.47
CAB39-201ENST00000258418 SBNO2Q9Y2G9 1366 aa17.96■□□□□ 0.47
CAB39-201ENST00000258418 RPAP2Q8IXW5 612 aaPredicted RBP17.96■□□□□ 0.47
CAB39-201ENST00000258418 USP19O94966 1318 aa17.96■□□□□ 0.47
CAB39-201ENST00000258418 METP08581 1390 aa17.96■□□□□ 0.47
CAB39-201ENST00000258418 GOLGA6L4A6NEF3 574 aa17.96■□□□□ 0.47
CAB39-201ENST00000258418 LTKP29376 864 aa17.96■□□□□ 0.47
CAB39-201ENST00000258418 EYA1Q99502 592 aa17.96■□□□□ 0.47
CAB39-201ENST00000258418 ERC2O15083 957 aa17.95■□□□□ 0.46
CAB39-201ENST00000258418 TAF7Q15545 349 aaPredicted RBP17.95■□□□□ 0.46
CAB39-201ENST00000258418 LRRC59Q96AG4 307 aaKnown RBP17.95■□□□□ 0.46
CAB39-201ENST00000258418 PIP4K2AP48426 406 aaPredicted RBP17.95■□□□□ 0.46
CAB39-201ENST00000258418 RABEP1Q15276 862 aa17.95■□□□□ 0.46
CAB39-201ENST00000258418 GDPD2Q9HCC8 539 aa17.95■□□□□ 0.46
CAB39-201ENST00000258418 ZMYM3Q14202 1370 aa17.95■□□□□ 0.46
CAB39-201ENST00000258418 CWC27Q6UX04 472 aaKnown RBP17.94■□□□□ 0.46
CAB39-201ENST00000258418 VPS37CA5D8V6 355 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms