RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 SH3BP2P78314 561 aa7.88□□□□□ -1.15
HMGB1P5-201ENST00000255320 KCNC4Q03721 635 aa7.88□□□□□ -1.15
HMGB1P5-201ENST00000255320 PDE4CQ08493 712 aa7.88□□□□□ -1.15
HMGB1P5-201ENST00000255320 ELOAQ14241 798 aaKnown RBP7.88□□□□□ -1.15
HMGB1P5-201ENST00000255320 DZIP3Q86Y13 1208 aaKnown RBP7.88□□□□□ -1.15
HMGB1P5-201ENST00000255320 CCDC85AQ96PX6 553 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P5-201ENST00000255320 FAM196BA6NMK8 535 aa7.86□□□□□ -1.15
HMGB1P5-201ENST00000255320 USP17L15C9J2P7 530 aa7.86□□□□□ -1.15
HMGB1P5-201ENST00000255320 USP17L10C9JJH3 530 aa7.86□□□□□ -1.15
HMGB1P5-201ENST00000255320 USP17L13C9JLJ4 530 aa7.86□□□□□ -1.15
HMGB1P5-201ENST00000255320 USP17L12C9JPN9 530 aa7.86□□□□□ -1.15
HMGB1P5-201ENST00000255320 USP17L11C9JVI0 530 aa7.86□□□□□ -1.15
HMGB1P5-201ENST00000255320 USP17L21D6R901 530 aa7.86□□□□□ -1.15
HMGB1P5-201ENST00000255320 USP17L18D6R9N7 530 aa7.86□□□□□ -1.15
HMGB1P5-201ENST00000255320 USP17L22D6RA61 530 aa7.86□□□□□ -1.15
HMGB1P5-201ENST00000255320 USP17L17D6RBQ6 530 aa7.86□□□□□ -1.15
HMGB1P5-201ENST00000255320 USP17L19D6RCP7 530 aa7.86□□□□□ -1.15
HMGB1P5-201ENST00000255320 USP17L20D6RJB6 530 aa7.86□□□□□ -1.15
HMGB1P5-201ENST00000255320 USP17L24Q0WX57 530 aa7.86□□□□□ -1.15
HMGB1P5-201ENST00000255320 AGERQ15109 404 aa7.86□□□□□ -1.15
HMGB1P5-201ENST00000255320 TSGA10IPQ3SY00 556 aa7.86□□□□□ -1.15
HMGB1P5-201ENST00000255320 CRTC2Q53ET0 693 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P5-201ENST00000255320 AEBP1Q8IUX7 1158 aa7.86□□□□□ -1.15
HMGB1P5-201ENST00000255320 SPNS2Q8IVW8 549 aa7.86□□□□□ -1.15
HMGB1P5-201ENST00000255320 TRMT44Q8IYL2 757 aaKnown RBP7.86□□□□□ -1.15
HMGB1P5-201ENST00000255320 ANKLE1Q8NAG6 615 aa7.86□□□□□ -1.15
HMGB1P5-201ENST00000255320 STK32AQ8WU08 396 aa7.86□□□□□ -1.15
HMGB1P5-201ENST00000255320 GIGYF1O75420 1035 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P5-201ENST00000255320 TRIM32Q13049 653 aa7.85□□□□□ -1.15
HMGB1P5-201ENST00000255320 MAP7D1Q3KQU3 841 aa7.85□□□□□ -1.15
HMGB1P5-201ENST00000255320 SLC10A4Q96EP9 437 aa7.85□□□□□ -1.15
HMGB1P5-201ENST00000255320 MKRN1Q9UHC7 482 aaKnown RBP7.85□□□□□ -1.15
HMGB1P5-201ENST00000255320 ESPNB1AK53 854 aa7.84□□□□□ -1.15
HMGB1P5-201ENST00000255320 LZTS3O60299 673 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P5-201ENST00000255320 SKOR1P84550 965 aa7.84□□□□□ -1.15
HMGB1P5-201ENST00000255320 PTK7Q13308 1070 aa7.84□□□□□ -1.15
HMGB1P5-201ENST00000255320 TMEM164Q5U3C3 297 aa7.84□□□□□ -1.15
HMGB1P5-201ENST00000255320 NOVA2Q9UNW9 492 aaKnown RBP7.84□□□□□ -1.15
HMGB1P5-201ENST00000255320 ATP5J2-PTCD1G3V325 749 aa7.83□□□□□ -1.16
HMGB1P5-201ENST00000255320 BRD1O95696 1058 aa7.83□□□□□ -1.16
HMGB1P5-201ENST00000255320 EML3Q32P44 896 aa7.83□□□□□ -1.16
HMGB1P5-201ENST00000255320 DOLKQ9UPQ8 538 aa7.83□□□□□ -1.16
HMGB1P5-201ENST00000255320 CLDN10P78369 228 aa7.82□□□□□ -1.16
HMGB1P5-201ENST00000255320 NBPF20Q3BBV1 942 aa7.82□□□□□ -1.16
HMGB1P5-201ENST00000255320 PPP1R18Q6NYC8 613 aa7.82□□□□□ -1.16
HMGB1P5-201ENST00000255320 PCDH10Q9P2E7 1040 aa7.82□□□□□ -1.16
HMGB1P5-201ENST00000255320 ZBTB24O43167 697 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P5-201ENST00000255320 RASA1P20936 1047 aa7.81□□□□□ -1.16
HMGB1P5-201ENST00000255320 WNT7BP56706 349 aa7.81□□□□□ -1.16
HMGB1P5-201ENST00000255320 KCNA1Q09470 495 aa7.81□□□□□ -1.16
HMGB1P5-201ENST00000255320 GGCXP38435 758 aa7.8□□□□□ -1.16
HMGB1P5-201ENST00000255320 FAM69CQ0P6D2 419 aa7.8□□□□□ -1.16
HMGB1P5-201ENST00000255320 OXLD1Q5BKU9 147 aa7.8□□□□□ -1.16
HMGB1P5-201ENST00000255320 SEPT12Q8IYM1 358 aa7.8□□□□□ -1.16
HMGB1P5-201ENST00000255320 OGFOD1Q8N543 542 aa7.8□□□□□ -1.16
HMGB1P5-201ENST00000255320 EMID1Q96A84 441 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P5-201ENST00000255320 CDCA7Q9BWT1 371 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P5-201ENST00000255320 SLAIN2Q9P270 581 aa7.8□□□□□ -1.16
HMGB1P5-201ENST00000255320 CDV3Q9UKY7 258 aaKnown RBP7.8□□□□□ -1.16
HMGB1P5-201ENST00000255320 KIAA1024Q9UPX6 916 aa7.8□□□□□ -1.16
HMGB1P5-201ENST00000255320 DKK1O94907 266 aa7.79□□□□□ -1.16
HMGB1P5-201ENST00000255320 VARSP26640 1264 aaKnown RBP7.79□□□□□ -1.16
HMGB1P5-201ENST00000255320 RPIAP49247 311 aa7.79□□□□□ -1.16
HMGB1P5-201ENST00000255320 RNF20Q5VTR2 975 aa7.79□□□□□ -1.16
HMGB1P5-201ENST00000255320 LARP1Q6PKG0 1096 aaKnown RBP7.79□□□□□ -1.16
HMGB1P5-201ENST00000255320 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.79□□□□□ -1.16
HMGB1P5-201ENST00000255320 NOD1Q9Y239 953 aa7.79□□□□□ -1.16
HMGB1P5-201ENST00000255320 MAP4K5Q9Y4K4 846 aa7.79□□□□□ -1.16
HMGB1P5-201ENST00000255320 TRIM50Q86XT4 487 aa7.78□□□□□ -1.16
HMGB1P5-201ENST00000255320 ANKMY2Q8IV38 441 aa7.78□□□□□ -1.16
HMGB1P5-201ENST00000255320 SIX5Q8N196 739 aa7.78□□□□□ -1.16
HMGB1P5-201ENST00000255320 ZNF594Q96JF6 807 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P5-201ENST00000255320 KCTD15Q96SI1 283 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P5-201ENST00000255320 PCDHB11Q9Y5F2 797 aa7.78□□□□□ -1.16
HMGB1P5-201ENST00000255320 PATL2C9JE40 543 aaKnown RBP7.77□□□□□ -1.17
HMGB1P5-201ENST00000255320 GTF2IP78347 998 aa7.77□□□□□ -1.17
HMGB1P5-201ENST00000255320 DPYDQ12882 1025 aa7.77□□□□□ -1.17
HMGB1P5-201ENST00000255320 INTS6LQ5JSJ4 861 aaKnown RBP7.77□□□□□ -1.17
HMGB1P5-201ENST00000255320 DNAAF2Q9NVR5 837 aaKnown RBP7.77□□□□□ -1.17
HMGB1P5-201ENST00000255320 ZBTB7BO15156 539 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P5-201ENST00000255320 ATP1A2P50993 1020 aa7.76□□□□□ -1.17
HMGB1P5-201ENST00000255320 PHLDB3Q6NSJ2 640 aa7.76□□□□□ -1.17
HMGB1P5-201ENST00000255320 LIAT1Q6ZQX7 453 aa7.76□□□□□ -1.17
HMGB1P5-201ENST00000255320 LARGE2Q8N3Y3 721 aa7.76□□□□□ -1.17
HMGB1P5-201ENST00000255320 FAM200AQ8TCP9 573 aa7.76□□□□□ -1.17
HMGB1P5-201ENST00000255320 PCDHGA11Q9Y5H2 935 aa7.76□□□□□ -1.17
HMGB1P5-201ENST00000255320 VASH1Q7L8A9 365 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P5-201ENST00000255320 EHBP1Q8NDI1 1231 aa7.75□□□□□ -1.17
HMGB1P5-201ENST00000255320 CLP1Q92989 425 aaKnown RBP7.75□□□□□ -1.17
HMGB1P5-201ENST00000255320 GZF1Q9H116 711 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P5-201ENST00000255320 CCDC9Q9Y3X0 531 aaKnown RBP7.75□□□□□ -1.17
HMGB1P5-201ENST00000255320 TLL2Q9Y6L7 1015 aa7.75□□□□□ -1.17
HMGB1P5-201ENST00000255320 SCTRP47872 440 aa7.74□□□□□ -1.17
HMGB1P5-201ENST00000255320 RAB15P59190 212 aa7.74□□□□□ -1.17
HMGB1P5-201ENST00000255320 RC3H1Q5TC82 1133 aaKnown RBP7.74□□□□□ -1.17
HMGB1P5-201ENST00000255320 CCDC125Q86Z20 511 aa7.74□□□□□ -1.17
HMGB1P5-201ENST00000255320 CDK15Q96Q40 435 aa7.74□□□□□ -1.17
HMGB1P5-201ENST00000255320 IVNS1ABPQ9Y6Y0 642 aa7.74□□□□□ -1.17
HMGB1P5-201ENST00000255320 ERVH48-1M5A8F1 160 aa7.73□□□□□ -1.17
HMGB1P5-201ENST00000255320 FSHRP23945 695 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms