RNA–Protein interactions for RNA: ENST00000254765.3

POPDC3-201, Transcript of popeye domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POPDC3, Length 1,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3-201ENST00000254765 BANK1Q8NDB2 785 aa9.84□□□□□ -0.83
POPDC3-201ENST00000254765 PURBQ96QR8 312 aaKnown RBP9.84□□□□□ -0.83
POPDC3-201ENST00000254765 FBXO45P0C2W1 286 aa9.83□□□□□ -0.84
POPDC3-201ENST00000254765 C6orf118Q5T5N4 469 aa9.83□□□□□ -0.84
POPDC3-201ENST00000254765 CCDC116Q8IYX3 515 aa9.83□□□□□ -0.84
POPDC3-201ENST00000254765 TRIM47Q96LD4 638 aa9.83□□□□□ -0.84
POPDC3-201ENST00000254765 GPSM3Q9Y4H4 160 aa9.83□□□□□ -0.84
POPDC3-201ENST00000254765 MRPL14Q6P1L8 145 aaKnown RBP9.82□□□□□ -0.84
POPDC3-201ENST00000254765 ZFP42Q96MM3 310 aa9.82□□□□□ -0.84
POPDC3-201ENST00000254765 SENP2Q9HC62 589 aa9.82□□□□□ -0.84
POPDC3-201ENST00000254765 PCDHB9Q9Y5E1 797 aa9.82□□□□□ -0.84
POPDC3-201ENST00000254765 INTS6LQ5JSJ4 861 aaKnown RBP9.82□□□□□ -0.84
POPDC3-201ENST00000254765 PPP1R26Q5T8A7 1209 aaPredicted RBP9.82□□□□□ -0.84
POPDC3-201ENST00000254765 ZBBXA8MT70 800 aa9.81□□□□□ -0.84
POPDC3-201ENST00000254765 CBLBQ13191 982 aa9.81□□□□□ -0.84
POPDC3-201ENST00000254765 NDUFB9Q9Y6M9 179 aa9.81□□□□□ -0.84
POPDC3-201ENST00000254765 SOBPA7XYQ1 873 aa9.8□□□□□ -0.84
POPDC3-201ENST00000254765 GPR37L1O60883 481 aa9.8□□□□□ -0.84
POPDC3-201ENST00000254765 TMPRSS4Q9NRS4 437 aa9.8□□□□□ -0.84
POPDC3-201ENST00000254765 TBC1D2BQ9UPU7 963 aa9.8□□□□□ -0.84
POPDC3-201ENST00000254765 SCARF1Q14162 830 aa9.79□□□□□ -0.84
POPDC3-201ENST00000254765 KIFC2Q96AC6 838 aa9.79□□□□□ -0.84
POPDC3-201ENST00000254765 EMILIN1Q9Y6C2 1016 aa9.79□□□□□ -0.84
POPDC3-201ENST00000254765 BMP2P12643 396 aa9.78□□□□□ -0.84
POPDC3-201ENST00000254765 NBPF20Q3BBV1 942 aa9.78□□□□□ -0.84
POPDC3-201ENST00000254765 CDV3Q9UKY7 258 aaKnown RBP9.78□□□□□ -0.84
POPDC3-201ENST00000254765 MEIOBQ8N635 442 aa9.77□□□□□ -0.85
POPDC3-201ENST00000254765 PGPEP1Q9NXJ5 209 aa9.77□□□□□ -0.85
POPDC3-201ENST00000254765 LINC00528Q8N1L1 170 aa9.76□□□□□ -0.85
POPDC3-201ENST00000254765 AGBL1Q96MI9 1066 aa9.76□□□□□ -0.85
POPDC3-201ENST00000254765 ERVH48-1M5A8F1 160 aa9.75□□□□□ -0.85
POPDC3-201ENST00000254765 GIGYF1O75420 1035 aaPredicted RBP9.75□□□□□ -0.85
POPDC3-201ENST00000254765 NR1H3Q13133 447 aa9.75□□□□□ -0.85
POPDC3-201ENST00000254765 APBB1O00213 710 aa9.74□□□□□ -0.85
POPDC3-201ENST00000254765 UPP2O95045 317 aa9.74□□□□□ -0.85
POPDC3-201ENST00000254765 VEGFBP49765 207 aa9.74□□□□□ -0.85
POPDC3-201ENST00000254765 DHX9Q08211 1270 aaKnown RBP9.74□□□□□ -0.85
POPDC3-201ENST00000254765 ZNF784Q8NCA9 323 aaPredicted RBP9.74□□□□□ -0.85
POPDC3-201ENST00000254765 GDPD2Q9HCC8 539 aa9.74□□□□□ -0.85
POPDC3-201ENST00000254765 ABL2P42684 1182 aa9.73□□□□□ -0.85
POPDC3-201ENST00000254765 CYLDQ9NQC7 956 aa9.73□□□□□ -0.85
POPDC3-201ENST00000254765 RELBQ01201 579 aa9.72□□□□□ -0.85
POPDC3-201ENST00000254765 ESPNB1AK53 854 aa9.71□□□□□ -0.86
POPDC3-201ENST00000254765 MCM6Q14566 821 aa9.71□□□□□ -0.86
POPDC3-201ENST00000254765 SOCS7O14512 581 aa9.7□□□□□ -0.86
POPDC3-201ENST00000254765 MAN1A2O60476 641 aa9.7□□□□□ -0.86
POPDC3-201ENST00000254765 IRF5Q13568 498 aa9.7□□□□□ -0.86
POPDC3-201ENST00000254765 TSEN34Q9BSV6 310 aaKnown RBP9.7□□□□□ -0.86
POPDC3-201ENST00000254765 ZNF395Q9H8N7 513 aaPredicted RBP9.7□□□□□ -0.86
POPDC3-201ENST00000254765 ADD1P35611 737 aaKnown RBP9.69□□□□□ -0.86
POPDC3-201ENST00000254765 VAC14Q08AM6 782 aa9.69□□□□□ -0.86
POPDC3-201ENST00000254765 Q6ZVU0 165 aa9.69□□□□□ -0.86
POPDC3-201ENST00000254765 FIGNL2A6NMB9 653 aa9.68□□□□□ -0.86
POPDC3-201ENST00000254765 TREML4Q6UXN2 200 aa9.68□□□□□ -0.86
POPDC3-201ENST00000254765 TERTO14746 1132 aaKnown RBP9.67□□□□□ -0.86
POPDC3-201ENST00000254765 LILRA1O75019 489 aa9.67□□□□□ -0.86
POPDC3-201ENST00000254765 WFS1O76024 890 aa9.67□□□□□ -0.86
POPDC3-201ENST00000254765 PRM3Q9NNZ6 103 aa9.67□□□□□ -0.86
POPDC3-201ENST00000254765 DNMT3LQ9UJW3 386 aa9.67□□□□□ -0.86
POPDC3-201ENST00000254765 ZNF330Q9Y3S2 320 aaPredicted RBP9.67□□□□□ -0.86
POPDC3-201ENST00000254765 NFX1Q12986 1120 aaKnown RBP9.66□□□□□ -0.86
POPDC3-201ENST00000254765 INSM2Q96T92 566 aaPredicted RBP9.66□□□□□ -0.86
POPDC3-201ENST00000254765 SOS2Q07890 1332 aaPredicted RBP9.66□□□□□ -0.86
POPDC3-201ENST00000254765 LCE2CQ5TA81 110 aa9.65□□□□□ -0.86
POPDC3-201ENST00000254765 POM121Q96HA1 1249 aa9.65□□□□□ -0.86
POPDC3-201ENST00000254765 PCDHB11Q9Y5F2 797 aa9.65□□□□□ -0.86
POPDC3-201ENST00000254765 TTLL8A6PVC2 850 aa9.64□□□□□ -0.87
POPDC3-201ENST00000254765 ADH1AP07327 375 aa9.64□□□□□ -0.87
POPDC3-201ENST00000254765 CTSOP43234 321 aaPredicted RBP9.64□□□□□ -0.87
POPDC3-201ENST00000254765 POLMQ9NP87 494 aaPredicted RBP9.64□□□□□ -0.87
POPDC3-201ENST00000254765 NXF1Q9UBU9 619 aaKnown RBP9.64□□□□□ -0.87
POPDC3-201ENST00000254765 SCTRP47872 440 aa9.63□□□□□ -0.87
POPDC3-201ENST00000254765 SEPT12Q8IYM1 358 aa9.63□□□□□ -0.87
POPDC3-201ENST00000254765 SPINT1O43278 529 aa9.62□□□□□ -0.87
POPDC3-201ENST00000254765 LCE2AQ5TA79 106 aaPredicted RBP9.62□□□□□ -0.87
POPDC3-201ENST00000254765 COG6Q9Y2V7 657 aa9.62□□□□□ -0.87
POPDC3-201ENST00000254765 KDF1Q8NAX2 398 aaPredicted RBP9.61□□□□□ -0.87
POPDC3-201ENST00000254765 CEP126Q9P2H0 1117 aa9.61□□□□□ -0.87
POPDC3-201ENST00000254765 EIF4G2P78344 907 aaKnown RBP eCLIP9.6□□□□□ -0.87
POPDC3-201ENST00000254765 RNF20Q5VTR2 975 aa9.6□□□□□ -0.87
POPDC3-201ENST00000254765 CCDC85AQ96PX6 553 aaPredicted RBP9.6□□□□□ -0.87
POPDC3-201ENST00000254765 CDCA7Q9BWT1 371 aaPredicted RBP9.6□□□□□ -0.87
POPDC3-201ENST00000254765 PTGIRP43119 386 aa9.59□□□□□ -0.87
POPDC3-201ENST00000254765 TMEM132AQ24JP5 1023 aa9.59□□□□□ -0.87
POPDC3-201ENST00000254765 TSGA10IPQ3SY00 556 aa9.59□□□□□ -0.87
POPDC3-201ENST00000254765 CC2D2BQ6DHV5 1058 aa9.59□□□□□ -0.87
POPDC3-201ENST00000254765 MEN1O00255 615 aa9.58□□□□□ -0.88
POPDC3-201ENST00000254765 MCCD1P59942 119 aaPredicted RBP9.58□□□□□ -0.88
POPDC3-201ENST00000254765 ATP5J2-PTCD1G3V325 749 aa9.57□□□□□ -0.88
POPDC3-201ENST00000254765 ERVK-9P63128 1117 aa9.57□□□□□ -0.88
POPDC3-201ENST00000254765 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.57□□□□□ -0.88
POPDC3-201ENST00000254765 SLC16A10Q8TF71 515 aa9.57□□□□□ -0.88
POPDC3-201ENST00000254765 ERBB4Q15303 1308 aa9.57□□□□□ -0.88
POPDC3-201ENST00000254765 H3BM21 787 aa9.56□□□□□ -0.88
POPDC3-201ENST00000254765 UBTFP17480 764 aaKnown RBP9.56□□□□□ -0.88
POPDC3-201ENST00000254765 FOXD4L5Q5VV16 416 aaPredicted RBP9.56□□□□□ -0.88
POPDC3-201ENST00000254765 RNF217Q8TC41 542 aa9.56□□□□□ -0.88
POPDC3-201ENST00000254765 ZNF592Q92610 1267 aa9.56□□□□□ -0.88
POPDC3-201ENST00000254765 ESF1Q9H501 851 aaKnown RBP9.56□□□□□ -0.88
POPDC3-201ENST00000254765 RAB6BQ9NRW1 208 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms