RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 IPO4Q8TEX9 1081 aaKnown RBP25.2■■□□□ 1.62
RARA-201ENST00000254066 IPO8O15397 1037 aaKnown RBP25.2■■□□□ 1.62
RARA-201ENST00000254066 GCC1Q96CN9 775 aa25.2■■□□□ 1.62
RARA-201ENST00000254066 NOS1P29475 1434 aa25.19■■□□□ 1.62
RARA-201ENST00000254066 CLTCL1P53675 1640 aa25.19■■□□□ 1.62
RARA-201ENST00000254066 RABEP1Q15276 862 aa25.18■■□□□ 1.62
RARA-201ENST00000254066 MCTP1Q6DN14 999 aa25.18■■□□□ 1.62
RARA-201ENST00000254066 PPP6R1Q9UPN7 881 aa25.18■■□□□ 1.62
RARA-201ENST00000254066 CHMP4BQ9H444 224 aaKnown RBP25.18■■□□□ 1.62
RARA-201ENST00000254066 IL16Q14005 1332 aa25.18■■□□□ 1.62
RARA-201ENST00000254066 SETD1BQ9UPS6 1966 aaKnown RBP25.18■■□□□ 1.62
RARA-201ENST00000254066 PRIM1P49642 420 aaKnown RBP25.17■■□□□ 1.62
RARA-201ENST00000254066 LRSAM1Q6UWE0 723 aa25.17■■□□□ 1.62
RARA-201ENST00000254066 FOXD4L1Q9NU39 408 aa25.17■■□□□ 1.62
RARA-201ENST00000254066 MROH2AA6NES4 1674 aa25.17■■□□□ 1.62
RARA-201ENST00000254066 MYOM2P54296 1465 aa25.17■■□□□ 1.62
RARA-201ENST00000254066 GTPBP4Q9BZE4 634 aaKnown RBP25.17■■□□□ 1.62
RARA-201ENST00000254066 LNPKQ9C0E8 428 aa25.17■■□□□ 1.62
RARA-201ENST00000254066 MYRIPQ8NFW9 859 aa25.16■■□□□ 1.62
RARA-201ENST00000254066 NSD3Q9BZ95 1437 aa25.16■■□□□ 1.62
RARA-201ENST00000254066 TBC1D9Q6ZT07 1266 aa25.16■■□□□ 1.62
RARA-201ENST00000254066 SSH1Q8WYL5 1049 aa25.16■■□□□ 1.62
RARA-201ENST00000254066 PRIMPOLQ96LW4 560 aa25.16■■□□□ 1.62
RARA-201ENST00000254066 C3P01024 1663 aa25.16■■□□□ 1.62
RARA-201ENST00000254066 TNNT2P45379 298 aaPredicted RBP25.15■■□□□ 1.62
RARA-201ENST00000254066 TMEM57Q8N5G2 664 aa25.15■■□□□ 1.62
RARA-201ENST00000254066 ZSCAN20P17040 1043 aaPredicted RBP25.14■■□□□ 1.62
RARA-201ENST00000254066 CEBPAP49715 358 aaPredicted RBP25.14■■□□□ 1.62
RARA-201ENST00000254066 HMGN5P82970 282 aaKnown RBP25.14■■□□□ 1.61
RARA-201ENST00000254066 KIF20AO95235 890 aa25.13■■□□□ 1.61
RARA-201ENST00000254066 GTF2F1P35269 517 aaKnown RBP eCLIP25.13■■□□□ 1.611e-7■■■■■ 30.9
RARA-201ENST00000254066 EXOSC9Q06265 439 aaKnown RBP25.13■■□□□ 1.61
RARA-201ENST00000254066 NOB1Q9ULX3 412 aaKnown RBP25.13■■□□□ 1.61
RARA-201ENST00000254066 MED14O60244 1454 aa25.12■■□□□ 1.61
RARA-201ENST00000254066 CDC45O75419 566 aa25.12■■□□□ 1.61
RARA-201ENST00000254066 KIAA2012Q0VF49 1180 aa25.12■■□□□ 1.61
RARA-201ENST00000254066 GTF2E1P29083 439 aaPredicted RBP25.11■■□□□ 1.61
RARA-201ENST00000254066 ALDH1L2Q3SY69 923 aa25.11■■□□□ 1.61
RARA-201ENST00000254066 RBM42Q9BTD8 480 aaKnown RBP25.11■■□□□ 1.61
RARA-201ENST00000254066 NPATQ14207 1427 aa25.1■■□□□ 1.61
RARA-201ENST00000254066 MTHFSP49914 203 aa25.1■■□□□ 1.61
RARA-201ENST00000254066 BRPF1P55201 1214 aaPredicted RBP25.09■■□□□ 1.61
RARA-201ENST00000254066 NSD2O96028 1365 aa25.09■■□□□ 1.61
RARA-201ENST00000254066 MBD3O95983 291 aa25.08■■□□□ 1.61
RARA-201ENST00000254066 HSPA2P54652 639 aa25.08■■□□□ 1.61
RARA-201ENST00000254066 GPT2Q8TD30 523 aa25.07■■□□□ 1.6
RARA-201ENST00000254066 ZNF428Q96B54 188 aa25.07■■□□□ 1.6
RARA-201ENST00000254066 LETM1O95202 739 aaPredicted RBP25.06■■□□□ 1.6
RARA-201ENST00000254066 TSR2Q969E8 191 aaKnown RBP25.06■■□□□ 1.6
RARA-201ENST00000254066 ANKRD45Q5TZF3 282 aa25.05■■□□□ 1.6
RARA-201ENST00000254066 ZHX1Q9UKY1 873 aaPredicted RBP25.05■■□□□ 1.6
RARA-201ENST00000254066 HOMEZQ8IX15 550 aa25.05■■□□□ 1.6
RARA-201ENST00000254066 TET3O43151 1660 aa25.05■■□□□ 1.6
RARA-201ENST00000254066 PRPF40AO75400 957 aaKnown RBP25.04■■□□□ 1.6
RARA-201ENST00000254066 GGT6Q6P531 493 aa25.04■■□□□ 1.6
RARA-201ENST00000254066 U2AF1L5P0DN76 240 aaPredicted RBP25.03■■□□□ 1.6
RARA-201ENST00000254066 U2AF1Q01081 240 aaKnown RBP eCLIP25.03■■□□□ 1.6
RARA-201ENST00000254066 PPIP5K1Q6PFW1 1433 aa25.03■■□□□ 1.6
RARA-201ENST00000254066 SETBP1Q9Y6X0 1596 aa25.03■■□□□ 1.6
RARA-201ENST00000254066 CLTCQ00610 1675 aaKnown RBP25.03■■□□□ 1.6
RARA-201ENST00000254066 PRDM10Q9NQV6 1147 aa25.03■■□□□ 1.6
RARA-201ENST00000254066 TMEM63CQ9P1W3 806 aa25.02■■□□□ 1.6
RARA-201ENST00000254066 AK9Q5TCS8 1911 aa25.01■■□□□ 1.59
RARA-201ENST00000254066 CFAP70Q5T0N1 1121 aa25.01■■□□□ 1.59
RARA-201ENST00000254066 DEPDC5O75140 1603 aa25.01■■□□□ 1.59
RARA-201ENST00000254066 TMPOP42166 694 aaKnown RBP25.01■■□□□ 1.59
RARA-201ENST00000254066 PIK3R4Q99570 1358 aa25.01■■□□□ 1.59
RARA-201ENST00000254066 ZC3H13Q5T200 1668 aaKnown RBP25■■□□□ 1.59
RARA-201ENST00000254066 NRXN1Q9ULB1 1477 aa25■■□□□ 1.59
RARA-201ENST00000254066 PIBF1Q8WXW3 757 aa25■■□□□ 1.59
RARA-201ENST00000254066 CHMP4AQ9BY43 222 aa25■■□□□ 1.59
RARA-201ENST00000254066 ST18O60284 1047 aa25■■□□□ 1.59
RARA-201ENST00000254066 PUS7Q96PZ0 661 aaKnown RBP25■■□□□ 1.59
RARA-201ENST00000254066 PLEKHF1Q96S99 279 aa25■■□□□ 1.59
RARA-201ENST00000254066 TRIM35Q9UPQ4 493 aa25■■□□□ 1.59
RARA-201ENST00000254066 IFT172Q9UG01 1749 aa24.99■■□□□ 1.59
RARA-201ENST00000254066 PTMAP06454 111 aaKnown RBP24.99■■□□□ 1.59
RARA-201ENST00000254066 UVSSAQ2YD98 709 aa24.99■■□□□ 1.59
RARA-201ENST00000254066 RBM27Q9P2N5 1060 aaKnown RBP24.99■■□□□ 1.59
RARA-201ENST00000254066 SYCE3A1L190 88 aa24.98■■□□□ 1.59
RARA-201ENST00000254066 ZBTB7BO15156 539 aaPredicted RBP24.98■■□□□ 1.59
RARA-201ENST00000254066 ARHGAP45Q92619 1136 aa24.98■■□□□ 1.59
RARA-201ENST00000254066 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.98■■□□□ 1.59
RARA-201ENST00000254066 SYAP1Q96A49 352 aaPredicted RBP24.98■■□□□ 1.59
RARA-201ENST00000254066 KIF3BO15066 747 aa24.97■■□□□ 1.59
RARA-201ENST00000254066 USP26Q9BXU7 913 aa24.97■■□□□ 1.59
RARA-201ENST00000254066 TSPY26PQ9H489 355 aa24.97■■□□□ 1.59
RARA-201ENST00000254066 TAF3Q5VWG9 929 aa24.96■■□□□ 1.59
RARA-201ENST00000254066 ZNF710Q8N1W2 664 aa24.96■■□□□ 1.59
RARA-201ENST00000254066 FAM184AQ8NB25 1140 aa24.96■■□□□ 1.59
RARA-201ENST00000254066 DNTTIP2Q5QJE6 756 aaKnown RBP24.95■■□□□ 1.59
RARA-201ENST00000254066 ILDR1Q86SU0 546 aaPredicted RBP24.95■■□□□ 1.59
RARA-201ENST00000254066 ZDHHC9Q9Y397 364 aa24.95■■□□□ 1.59
RARA-201ENST00000254066 PHF14O94880 888 aa24.94■■□□□ 1.58
RARA-201ENST00000254066 PKP1Q13835 747 aa24.94■■□□□ 1.58
RARA-201ENST00000254066 KIF3AQ9Y496 699 aa24.94■■□□□ 1.58
RARA-201ENST00000254066 DHX37Q8IY37 1157 aaKnown RBP24.94■■□□□ 1.58
RARA-201ENST00000254066 PTCH1Q13635 1447 aa24.93■■□□□ 1.58
RARA-201ENST00000254066 INTS3Q68E01 1043 aaKnown RBP24.93■■□□□ 1.58
RARA-201ENST00000254066 ARID3AQ99856 593 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms