RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 AKNAQ7Z591 1439 aa17.11■□□□□ 0.33
ZC3H4-201ENST00000253048 CEP126Q9P2H0 1117 aa17.11■□□□□ 0.33
ZC3H4-201ENST00000253048 MAGEC2Q9UBF1 373 aaPredicted RBP17.11■□□□□ 0.33
ZC3H4-201ENST00000253048 DDX11L8A8MPP1 907 aa17.1■□□□□ 0.33
ZC3H4-201ENST00000253048 C6orf229H3BNL8 230 aa17.1■□□□□ 0.33
ZC3H4-201ENST00000253048 SLF2Q8IX21 1173 aa17.1■□□□□ 0.33
ZC3H4-201ENST00000253048 GNAI2P04899 355 aa17.1■□□□□ 0.33
ZC3H4-201ENST00000253048 TRIM22Q8IYM9 498 aa17.1■□□□□ 0.33
ZC3H4-201ENST00000253048 ERBINQ96RT1 1412 aa17.1■□□□□ 0.33
ZC3H4-201ENST00000253048 CA8P35219 290 aa17.1■□□□□ 0.33
ZC3H4-201ENST00000253048 TWISTNBQ3B726 338 aaPredicted RBP17.1■□□□□ 0.33
ZC3H4-201ENST00000253048 SRCIN1Q9C0H9 1055 aa17.1■□□□□ 0.33
ZC3H4-201ENST00000253048 SASS6Q6UVJ0 657 aa17.09■□□□□ 0.33
ZC3H4-201ENST00000253048 CADPS2Q86UW7 1296 aa17.09■□□□□ 0.33
ZC3H4-201ENST00000253048 PHF8Q9UPP1 1060 aa17.09■□□□□ 0.33
ZC3H4-201ENST00000253048 SLC4A2P04920 1241 aa17.09■□□□□ 0.33
ZC3H4-201ENST00000253048 CNTLNQ9NXG0 1405 aa17.09■□□□□ 0.33
ZC3H4-201ENST00000253048 DZIP1Q86YF9 867 aaKnown RBP17.09■□□□□ 0.33
ZC3H4-201ENST00000253048 NUDT16Q96DE0 195 aaKnown RBP17.08■□□□□ 0.33
ZC3H4-201ENST00000253048 ABCF2Q9UG63 623 aa17.08■□□□□ 0.33
ZC3H4-201ENST00000253048 KRT28Q7Z3Y7 464 aa17.08■□□□□ 0.33
ZC3H4-201ENST00000253048 EPRSP07814 1512 aaKnown RBP17.08■□□□□ 0.33
ZC3H4-201ENST00000253048 A0A087WZG4 1122 aa17.08■□□□□ 0.32
ZC3H4-201ENST00000253048 HSP90AB3PQ58FF7 597 aa17.08■□□□□ 0.32
ZC3H4-201ENST00000253048 CCDC97Q96F63 343 aaPredicted RBP17.08■□□□□ 0.32
ZC3H4-201ENST00000253048 FOXO3O43524 673 aa17.07■□□□□ 0.32
ZC3H4-201ENST00000253048 NF2P35240 595 aa17.07■□□□□ 0.32
ZC3H4-201ENST00000253048 METTL24Q5JXM2 366 aa17.07■□□□□ 0.32
ZC3H4-201ENST00000253048 VTI1AQ96AJ9 217 aa17.07■□□□□ 0.32
ZC3H4-201ENST00000253048 CRBNQ96SW2 442 aa17.07■□□□□ 0.32
ZC3H4-201ENST00000253048 UBAC1Q9BSL1 405 aa17.07■□□□□ 0.32
ZC3H4-201ENST00000253048 BEGAINQ9BUH8 593 aa17.07■□□□□ 0.32
ZC3H4-201ENST00000253048 DDX49Q9Y6V7 483 aaKnown RBP17.07■□□□□ 0.32
ZC3H4-201ENST00000253048 FGD6Q6ZV73 1430 aa17.07■□□□□ 0.32
ZC3H4-201ENST00000253048 MPHOSPH6Q99547 160 aaKnown RBP17.07■□□□□ 0.32
ZC3H4-201ENST00000253048 RRS1Q15050 365 aaKnown RBP17.06■□□□□ 0.32
ZC3H4-201ENST00000253048 DRC1Q96MC2 740 aa17.06■□□□□ 0.32
ZC3H4-201ENST00000253048 AMOTL2Q9Y2J4 779 aa17.06■□□□□ 0.32
ZC3H4-201ENST00000253048 IFIT1P09914 478 aaKnown RBP17.06■□□□□ 0.32
ZC3H4-201ENST00000253048 CCT4P50991 539 aaKnown RBP17.05■□□□□ 0.32
ZC3H4-201ENST00000253048 GPS2Q13227 327 aa17.05■□□□□ 0.32
ZC3H4-201ENST00000253048 FEZ1Q99689 392 aa17.05■□□□□ 0.32
ZC3H4-201ENST00000253048 C9orf84Q5VXU9 1444 aa17.05■□□□□ 0.32
ZC3H4-201ENST00000253048 GNAT3A8MTJ3 354 aa17.05■□□□□ 0.32
ZC3H4-201ENST00000253048 LNPKQ9C0E8 428 aa17.04■□□□□ 0.32
ZC3H4-201ENST00000253048 ATAD2Q6PL18 1390 aa17.04■□□□□ 0.32
ZC3H4-201ENST00000253048 ATF7IPQ6VMQ6 1270 aa17.04■□□□□ 0.32
ZC3H4-201ENST00000253048 CHMP5Q9NZZ3 219 aa17.04■□□□□ 0.32
ZC3H4-201ENST00000253048 CDR1P51861 262 aa17.03■□□□□ 0.32
ZC3H4-201ENST00000253048 DDX46Q7L014 1031 aaKnown RBP17.03■□□□□ 0.32
ZC3H4-201ENST00000253048 TRMT112Q9UI30 125 aaKnown RBP17.03■□□□□ 0.32
ZC3H4-201ENST00000253048 NOL7Q9UMY1 257 aaKnown RBP17.03■□□□□ 0.32
ZC3H4-201ENST00000253048 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.03■□□□□ 0.32
ZC3H4-201ENST00000253048 IDH1O75874 414 aaKnown RBP17.03■□□□□ 0.32
ZC3H4-201ENST00000253048 BMP2KQ9NSY1 1161 aaPredicted RBP17.03■□□□□ 0.32
ZC3H4-201ENST00000253048 CUL5Q93034 780 aa17.03■□□□□ 0.32
ZC3H4-201ENST00000253048 NCOA2Q15596 1464 aa17.03■□□□□ 0.32
ZC3H4-201ENST00000253048 SSBP05455 408 aaKnown RBP eCLIP17.03■□□□□ 0.32
ZC3H4-201ENST00000253048 EHMT1Q9H9B1 1298 aa17.03■□□□□ 0.32
ZC3H4-201ENST00000253048 MKNK2Q9HBH9 465 aa17.03■□□□□ 0.32
ZC3H4-201ENST00000253048 SEC63Q9UGP8 760 aaKnown RBP17.03■□□□□ 0.32
ZC3H4-201ENST00000253048 HDAC9Q9UKV0 1011 aa17.03■□□□□ 0.32
ZC3H4-201ENST00000253048 AMOTQ4VCS5 1084 aa17.02■□□□□ 0.32
ZC3H4-201ENST00000253048 AIDAQ96BJ3 306 aa17.02■□□□□ 0.32
ZC3H4-201ENST00000253048 HOMER1Q86YM7 354 aa17.02■□□□□ 0.32
ZC3H4-201ENST00000253048 LMTK3Q96Q04 1460 aa17.02■□□□□ 0.32
ZC3H4-201ENST00000253048 LMOD1P29536 600 aaPredicted RBP17.02■□□□□ 0.32
ZC3H4-201ENST00000253048 WDR70Q9NW82 654 aa17.02■□□□□ 0.32
ZC3H4-201ENST00000253048 RRP1P56182 461 aaKnown RBP17.02■□□□□ 0.31
ZC3H4-201ENST00000253048 MYO6Q9UM54 1294 aa17.02■□□□□ 0.31
ZC3H4-201ENST00000253048 CDC45O75419 566 aa17.01■□□□□ 0.31
ZC3H4-201ENST00000253048 CCDC96Q2M329 555 aa17.01■□□□□ 0.31
ZC3H4-201ENST00000253048 NAT10Q9H0A0 1025 aaKnown RBP17.01■□□□□ 0.31
ZC3H4-201ENST00000253048 HFM1A2PYH4 1435 aa17.01■□□□□ 0.31
ZC3H4-201ENST00000253048 AKAP2Q9Y2D5 859 aa17.01■□□□□ 0.31
ZC3H4-201ENST00000253048 BIN2Q9UBW5 565 aaPredicted RBP17.01■□□□□ 0.31
ZC3H4-201ENST00000253048 SKOR2Q2VWA4 1001 aaPredicted RBP17■□□□□ 0.31
ZC3H4-201ENST00000253048 CCDC61Q9Y6R9 512 aa17■□□□□ 0.31
ZC3H4-201ENST00000253048 PIP4K2AP48426 406 aaPredicted RBP17■□□□□ 0.31
ZC3H4-201ENST00000253048 PDILTQ8N807 584 aa17■□□□□ 0.31
ZC3H4-201ENST00000253048 SLC12A5Q9H2X9 1139 aa17■□□□□ 0.31
ZC3H4-201ENST00000253048 ZNF592Q92610 1267 aa16.99■□□□□ 0.31
ZC3H4-201ENST00000253048 RUFY1Q96T51 708 aa16.99■□□□□ 0.31
ZC3H4-201ENST00000253048 SDF4Q9BRK5 362 aa16.99■□□□□ 0.31
ZC3H4-201ENST00000253048 AACSQ86V21 672 aa16.99■□□□□ 0.31
ZC3H4-201ENST00000253048 CABP5Q9NP86 173 aa16.99■□□□□ 0.31
ZC3H4-201ENST00000253048 PARP3Q9Y6F1 533 aa16.99■□□□□ 0.31
ZC3H4-201ENST00000253048 SLC5A1P13866 664 aa16.99■□□□□ 0.31
ZC3H4-201ENST00000253048 TCP11L2Q8N4U5 519 aa16.99■□□□□ 0.31
ZC3H4-201ENST00000253048 CASKIN1Q8WXD9 1431 aa16.99■□□□□ 0.31
ZC3H4-201ENST00000253048 PIBF1Q8WXW3 757 aa16.99■□□□□ 0.31
ZC3H4-201ENST00000253048 TEX13AQ9BXU3 409 aaPredicted RBP16.99■□□□□ 0.31
ZC3H4-201ENST00000253048 TANGO6Q9C0B7 1094 aa16.99■□□□□ 0.31
ZC3H4-201ENST00000253048 STIM1Q13586 685 aa16.98■□□□□ 0.31
ZC3H4-201ENST00000253048 ZNF396Q96N95 335 aaPredicted RBP16.98■□□□□ 0.31
ZC3H4-201ENST00000253048 PRKRIP1Q9H875 184 aaPredicted RBP16.98■□□□□ 0.31
ZC3H4-201ENST00000253048 CTNNA3Q9UI47 895 aa16.98■□□□□ 0.31
ZC3H4-201ENST00000253048 FILIP1LQ4L180 1135 aa16.98■□□□□ 0.31
ZC3H4-201ENST00000253048 KIF21BO75037 1637 aa16.98■□□□□ 0.31
ZC3H4-201ENST00000253048 TFCP2L1Q9NZI6 479 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms