RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 PLIN1O60240 522 aa30.58■■■□□ 2.49
SYNGR3-201ENST00000248121 PLEKHG5O94827 1062 aa30.58■■■□□ 2.49
SYNGR3-201ENST00000248121 CCDC27Q2M243 656 aa30.55■■■□□ 2.48
SYNGR3-201ENST00000248121 BRINP3Q76B58 766 aa30.55■■■□□ 2.48
SYNGR3-201ENST00000248121 EIF4A2Q14240 407 aaKnown RBP30.54■■■□□ 2.48
SYNGR3-201ENST00000248121 EXOC6Q8TAG9 804 aa30.54■■■□□ 2.48
SYNGR3-201ENST00000248121 RGPD1P0DJD0 1748 aa30.54■■■□□ 2.48
SYNGR3-201ENST00000248121 PXDNQ92626 1479 aa30.54■■■□□ 2.48
SYNGR3-201ENST00000248121 HMOX1P09601 288 aa30.54■■■□□ 2.48
SYNGR3-201ENST00000248121 NCBP3Q53F19 620 aaKnown RBP30.54■■■□□ 2.48
SYNGR3-201ENST00000248121 LMOD2Q6P5Q4 547 aa30.54■■■□□ 2.48
SYNGR3-201ENST00000248121 SBNO1A3KN83 1393 aa30.53■■■□□ 2.48
SYNGR3-201ENST00000248121 LTBP4Q8N2S1 1624 aa30.53■■■□□ 2.48
SYNGR3-201ENST00000248121 SLIT3O75094 1523 aa30.52■■■□□ 2.48
SYNGR3-201ENST00000248121 RSPH6AQ9H0K4 717 aa30.51■■■□□ 2.48
SYNGR3-201ENST00000248121 FLT4P35916 1363 aa30.51■■■□□ 2.47
SYNGR3-201ENST00000248121 MED1Q15648 1581 aaPredicted RBP30.5■■■□□ 2.47
SYNGR3-201ENST00000248121 SLAIN2Q9P270 581 aa30.5■■■□□ 2.47
SYNGR3-201ENST00000248121 WDR63Q8IWG1 891 aa30.5■■■□□ 2.47
SYNGR3-201ENST00000248121 AMPHP49418 695 aa30.48■■■□□ 2.47
SYNGR3-201ENST00000248121 NPHP3Q7Z494 1330 aa30.47■■■□□ 2.47
SYNGR3-201ENST00000248121 PRKAR2BP31323 418 aa30.47■■■□□ 2.47
SYNGR3-201ENST00000248121 CCDC136Q96JN2 1154 aa30.47■■■□□ 2.47
SYNGR3-201ENST00000248121 HOXC9P31274 260 aa30.45■■■□□ 2.47
SYNGR3-201ENST00000248121 TMPOP42166 694 aaKnown RBP30.45■■■□□ 2.47
SYNGR3-201ENST00000248121 AEBP1Q8IUX7 1158 aa30.45■■■□□ 2.47
SYNGR3-201ENST00000248121 USP19O94966 1318 aa30.45■■■□□ 2.47
SYNGR3-201ENST00000248121 C20orf194Q5TEA3 1177 aa30.45■■■□□ 2.46
SYNGR3-201ENST00000248121 PHRF1Q9P1Y6 1649 aaKnown RBP30.45■■■□□ 2.46
SYNGR3-201ENST00000248121 CRYBG1Q9Y4K1 1723 aa30.44■■■□□ 2.46
SYNGR3-201ENST00000248121 TNS3Q68CZ2 1445 aa30.44■■■□□ 2.46
SYNGR3-201ENST00000248121 FCHSD2O94868 740 aa30.43■■■□□ 2.46
SYNGR3-201ENST00000248121 PHACTR3Q96KR7 559 aa30.43■■■□□ 2.46
SYNGR3-201ENST00000248121 GCP02774 474 aa30.42■■■□□ 2.46
SYNGR3-201ENST00000248121 MAPK8IP3Q9UPT6 1336 aa30.42■■■□□ 2.46
SYNGR3-201ENST00000248121 TRIM35Q9UPQ4 493 aa30.42■■■□□ 2.46
SYNGR3-201ENST00000248121 ZBTB7CA1YPR0 619 aa30.41■■■□□ 2.46
SYNGR3-201ENST00000248121 CRBNQ96SW2 442 aa30.41■■■□□ 2.46
SYNGR3-201ENST00000248121 DLG5Q8TDM6 1919 aa30.41■■■□□ 2.46
SYNGR3-201ENST00000248121 NHSL1Q5SYE7 1610 aa30.4■■■□□ 2.46
SYNGR3-201ENST00000248121 RGPD2P0DJD1 1756 aa30.39■■■□□ 2.46
SYNGR3-201ENST00000248121 RGPD5Q99666 1765 aa30.39■■■□□ 2.46
SYNGR3-201ENST00000248121 BCAR3O75815 825 aa30.38■■■□□ 2.45
SYNGR3-201ENST00000248121 SULT6B1Q6IMI4 303 aa30.38■■■□□ 2.45
SYNGR3-201ENST00000248121 KCNH5Q8NCM2 988 aa30.38■■■□□ 2.45
SYNGR3-201ENST00000248121 PNNQ9H307 717 aaKnown RBP30.38■■■□□ 2.45
SYNGR3-201ENST00000248121 KIF24Q5T7B8 1368 aa30.37■■■□□ 2.45
SYNGR3-201ENST00000248121 SPATA31A3Q5VYP0 1347 aa30.37■■■□□ 2.45
SYNGR3-201ENST00000248121 RTL1A6NKG5 1358 aa30.37■■■□□ 2.45
SYNGR3-201ENST00000248121 CABLES1Q8TDN4 633 aa30.37■■■□□ 2.45
SYNGR3-201ENST00000248121 LTV1Q96GA3 475 aaPredicted RBP30.36■■■□□ 2.45
SYNGR3-201ENST00000248121 EYA1Q99502 592 aa30.35■■■□□ 2.45
SYNGR3-201ENST00000248121 ROBO1Q9Y6N7 1651 aa30.34■■■□□ 2.45
SYNGR3-201ENST00000248121 RIPK4P57078 832 aa30.34■■■□□ 2.45
SYNGR3-201ENST00000248121 ARHGEF25Q86VW2 580 aa30.34■■■□□ 2.45
SYNGR3-201ENST00000248121 ARHGEF10O15013 1369 aa30.33■■■□□ 2.45
SYNGR3-201ENST00000248121 SOS2Q07890 1332 aaPredicted RBP30.33■■■□□ 2.45
SYNGR3-201ENST00000248121 IP6K1Q92551 441 aa30.33■■■□□ 2.45
SYNGR3-201ENST00000248121 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.32■■■□□ 2.44
SYNGR3-201ENST00000248121 IGSF1Q8N6C5 1336 aa30.31■■■□□ 2.44
SYNGR3-201ENST00000248121 ZC3H6P61129 1189 aaKnown RBP30.31■■■□□ 2.44
SYNGR3-201ENST00000248121 MYH16Q9H6N6 1097 aa30.31■■■□□ 2.44
SYNGR3-201ENST00000248121 ABCA3Q99758 1704 aa30.29■■■□□ 2.44
SYNGR3-201ENST00000248121 KDRP35968 1356 aa30.28■■■□□ 2.44
SYNGR3-201ENST00000248121 NFE2L2Q16236 605 aa30.27■■■□□ 2.44
SYNGR3-201ENST00000248121 AXIN2Q9Y2T1 843 aa30.27■■■□□ 2.44
SYNGR3-201ENST00000248121 FANCIQ9NVI1 1328 aa30.27■■■□□ 2.44
SYNGR3-201ENST00000248121 COL18A1P39060 1754 aa30.27■■■□□ 2.44
SYNGR3-201ENST00000248121 RARSP54136 660 aaKnown RBP30.27■■■□□ 2.44
SYNGR3-201ENST00000248121 USHBP1Q8N6Y0 703 aa30.27■■■□□ 2.44
SYNGR3-201ENST00000248121 TSR2Q969E8 191 aaKnown RBP30.26■■■□□ 2.43
SYNGR3-201ENST00000248121 IL16Q14005 1332 aa30.26■■■□□ 2.43
SYNGR3-201ENST00000248121 NEFMP07197 916 aa30.24■■■□□ 2.43
SYNGR3-201ENST00000248121 LRRC59Q96AG4 307 aaKnown RBP30.23■■■□□ 2.43
SYNGR3-201ENST00000248121 THUMPD2Q9BTF0 503 aaKnown RBP30.23■■■□□ 2.43
SYNGR3-201ENST00000248121 NBPF6Q5VWK0 638 aa30.21■■■□□ 2.43
SYNGR3-201ENST00000248121 NBPF4Q96M43 638 aa30.21■■■□□ 2.43
SYNGR3-201ENST00000248121 FAM83GA6ND36 823 aa30.2■■■□□ 2.43
SYNGR3-201ENST00000248121 CHRNA2Q15822 529 aa30.19■■■□□ 2.42
SYNGR3-201ENST00000248121 RBM19Q9Y4C8 960 aaKnown RBP30.19■■■□□ 2.42
SYNGR3-201ENST00000248121 CAMTA1Q9Y6Y1 1673 aa30.18■■■□□ 2.42
SYNGR3-201ENST00000248121 KIAA0232Q92628 1395 aa30.18■■■□□ 2.42
SYNGR3-201ENST00000248121 EXOSC9Q06265 439 aaKnown RBP30.17■■■□□ 2.42
SYNGR3-201ENST00000248121 ANKRD24Q8TF21 1146 aa30.17■■■□□ 2.42
SYNGR3-201ENST00000248121 AHDC1Q5TGY3 1603 aaPredicted RBP30.17■■■□□ 2.42
SYNGR3-201ENST00000248121 DCTN1Q14203 1278 aa30.16■■■□□ 2.42
SYNGR3-201ENST00000248121 PDE3AQ14432 1141 aa30.16■■■□□ 2.42
SYNGR3-201ENST00000248121 BCL2L13Q9BXK5 485 aa30.15■■■□□ 2.42
SYNGR3-201ENST00000248121 CT47B1P0C2W7 299 aaPredicted RBP30.15■■■□□ 2.42
SYNGR3-201ENST00000248121 MTHFSDQ2M296 383 aaKnown RBP30.15■■■□□ 2.42
SYNGR3-201ENST00000248121 AEBP2Q6ZN18 517 aaPredicted RBP30.13■■■□□ 2.41
SYNGR3-201ENST00000248121 LMO7Q8WWI1 1683 aa30.13■■■□□ 2.41
SYNGR3-201ENST00000248121 ERBB3P21860 1342 aa30.13■■■□□ 2.41
SYNGR3-201ENST00000248121 FRAT1Q92837 279 aaPredicted RBP30.11■■■□□ 2.41
SYNGR3-201ENST00000248121 CPDO75976 1380 aa30.11■■■□□ 2.41
SYNGR3-201ENST00000248121 NCAPD2Q15021 1401 aa30.11■■■□□ 2.41
SYNGR3-201ENST00000248121 PANK1Q8TE04 598 aa30.1■■■□□ 2.41
SYNGR3-201ENST00000248121 CANXP27824 592 aaKnown RBP30.09■■■□□ 2.41
SYNGR3-201ENST00000248121 TNNQ9UQP3 1299 aa30.09■■■□□ 2.41
SYNGR3-201ENST00000248121 FAM208AQ9UK61 1670 aaKnown RBP30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms