RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 TRIM6-TRIM34B2RNG4 842 aa20.78■□□□□ 0.92
SGPP1-201ENST00000247225 ZNF428Q96B54 188 aa20.78■□□□□ 0.92
SGPP1-201ENST00000247225 LARP6Q9BRS8 491 aaKnown RBP20.78■□□□□ 0.92
SGPP1-201ENST00000247225 GDPD2Q9HCC8 539 aa20.78■□□□□ 0.92
SGPP1-201ENST00000247225 PLEKHM2Q8IWE5 1019 aa20.78■□□□□ 0.92
SGPP1-201ENST00000247225 RTEL1-TNFRSF6BF6WH68 1400 aa20.77■□□□□ 0.92
SGPP1-201ENST00000247225 TXNDC2Q86VQ3 553 aa20.77■□□□□ 0.92
SGPP1-201ENST00000247225 ATP7AQ04656 1500 aa20.77■□□□□ 0.92
SGPP1-201ENST00000247225 NPATQ14207 1427 aa20.77■□□□□ 0.92
SGPP1-201ENST00000247225 NEK4P51957 841 aa20.77■□□□□ 0.92
SGPP1-201ENST00000247225 ALDH1L2Q3SY69 923 aa20.77■□□□□ 0.92
SGPP1-201ENST00000247225 ZMYND15Q9H091 742 aa20.77■□□□□ 0.92
SGPP1-201ENST00000247225 SYCE3A1L190 88 aa20.76■□□□□ 0.91
SGPP1-201ENST00000247225 SULT6B1Q6IMI4 303 aa20.76■□□□□ 0.91
SGPP1-201ENST00000247225 CEP152O94986 1710 aa20.76■□□□□ 0.91
SGPP1-201ENST00000247225 EXOC6BQ9Y2D4 811 aa20.76■□□□□ 0.91
SGPP1-201ENST00000247225 PRIM1P49642 420 aaKnown RBP20.76■□□□□ 0.91
SGPP1-201ENST00000247225 CASC1Q6TDU7 716 aa20.76■□□□□ 0.91
SGPP1-201ENST00000247225 SPHKAPQ2M3C7 1700 aa20.76■□□□□ 0.91
SGPP1-201ENST00000247225 SDSP20132 328 aa20.75■□□□□ 0.91
SGPP1-201ENST00000247225 MEIS3Q99687 375 aa20.75■□□□□ 0.91
SGPP1-201ENST00000247225 CIZ1Q9ULV3 898 aaPredicted RBP20.75■□□□□ 0.91
SGPP1-201ENST00000247225 ZFYVE16Q7Z3T8 1539 aa20.75■□□□□ 0.91
SGPP1-201ENST00000247225 IQSEC2Q5JU85 1478 aa20.75■□□□□ 0.91
SGPP1-201ENST00000247225 DNTTIP2Q5QJE6 756 aaKnown RBP20.75■□□□□ 0.91
SGPP1-201ENST00000247225 MAP3K4Q9Y6R4 1608 aa20.74■□□□□ 0.91
SGPP1-201ENST00000247225 ABCC11Q96J66 1382 aa20.74■□□□□ 0.91
SGPP1-201ENST00000247225 MAP4K4O95819 1239 aaPredicted RBP20.73■□□□□ 0.91
SGPP1-201ENST00000247225 SLC4A2P04920 1241 aa20.73■□□□□ 0.91
SGPP1-201ENST00000247225 API5Q9BZZ5 524 aaKnown RBP20.73■□□□□ 0.91
SGPP1-201ENST00000247225 RBSNQ9H1K0 784 aa20.73■□□□□ 0.91
SGPP1-201ENST00000247225 UPF3BQ9BZI7 483 aaKnown RBP20.73■□□□□ 0.91
SGPP1-201ENST00000247225 ST18O60284 1047 aa20.73■□□□□ 0.91
SGPP1-201ENST00000247225 ZSCAN23Q3MJ62 389 aa20.73■□□□□ 0.91
SGPP1-201ENST00000247225 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.73■□□□□ 0.91
SGPP1-201ENST00000247225 CHMP4BQ9H444 224 aaKnown RBP20.72■□□□□ 0.91
SGPP1-201ENST00000247225 INTS3Q68E01 1043 aaKnown RBP20.72■□□□□ 0.91
SGPP1-201ENST00000247225 ANO2Q9NQ90 1003 aa20.71■□□□□ 0.91
SGPP1-201ENST00000247225 SBNO2Q9Y2G9 1366 aa20.71■□□□□ 0.91
SGPP1-201ENST00000247225 RABEP1Q15276 862 aa20.71■□□□□ 0.91
SGPP1-201ENST00000247225 COG3Q96JB2 828 aa20.71■□□□□ 0.91
SGPP1-201ENST00000247225 NSFL1CQ9UNZ2 370 aaKnown RBP20.71■□□□□ 0.91
SGPP1-201ENST00000247225 CCDC173Q0VFZ6 552 aa20.7■□□□□ 0.9
SGPP1-201ENST00000247225 TTC22Q5TAA0 569 aa20.7■□□□□ 0.9
SGPP1-201ENST00000247225 IL16Q14005 1332 aa20.7■□□□□ 0.9
SGPP1-201ENST00000247225 DDIT3P35638 169 aa20.7■□□□□ 0.9
SGPP1-201ENST00000247225 PKNOX2Q96KN3 472 aa20.7■□□□□ 0.9
SGPP1-201ENST00000247225 ZSCAN30Q86W11 494 aa20.69■□□□□ 0.9
SGPP1-201ENST00000247225 KLHL40Q2TBA0 621 aa20.69■□□□□ 0.9
SGPP1-201ENST00000247225 USP26Q9BXU7 913 aa20.69■□□□□ 0.9
SGPP1-201ENST00000247225 AK9Q5TCS8 1911 aa20.69■□□□□ 0.9
SGPP1-201ENST00000247225 RPGRIP1LQ68CZ1 1315 aa20.69■□□□□ 0.9
SGPP1-201ENST00000247225 ZCCHC11Q5TAX3 1644 aaKnown RBP20.68■□□□□ 0.9
SGPP1-201ENST00000247225 CHD1O14646 1710 aa20.68■□□□□ 0.9
SGPP1-201ENST00000247225 NUCB2P80303 420 aa20.68■□□□□ 0.9
SGPP1-201ENST00000247225 FOXO3O43524 673 aa20.67■□□□□ 0.9
SGPP1-201ENST00000247225 MYOM2P54296 1465 aa20.67■□□□□ 0.9
SGPP1-201ENST00000247225 LTV1Q96GA3 475 aaPredicted RBP20.66■□□□□ 0.9
SGPP1-201ENST00000247225 ZNF830Q96NB3 372 aaPredicted RBP20.66■□□□□ 0.9
SGPP1-201ENST00000247225 BCL11BQ9C0K0 894 aaPredicted RBP20.66■□□□□ 0.9
SGPP1-201ENST00000247225 IFT57Q9NWB7 429 aa20.66■□□□□ 0.9
SGPP1-201ENST00000247225 CFAP44Q96MT7 982 aa20.66■□□□□ 0.9
SGPP1-201ENST00000247225 ASXL2Q76L83 1435 aa20.65■□□□□ 0.9
SGPP1-201ENST00000247225 G2E3Q7L622 706 aa20.65■□□□□ 0.9
SGPP1-201ENST00000247225 IL1RAPL2Q9NP60 686 aa20.65■□□□□ 0.9
SGPP1-201ENST00000247225 LMBRD1Q9NUN5 540 aa20.65■□□□□ 0.9
SGPP1-201ENST00000247225 RRP9O43818 475 aaKnown RBP20.65■□□□□ 0.9
SGPP1-201ENST00000247225 DDX54Q8TDD1 881 aaKnown RBP20.65■□□□□ 0.9
SGPP1-201ENST00000247225 NSD2O96028 1365 aa20.64■□□□□ 0.9
SGPP1-201ENST00000247225 NUTM2GQ5VZR2 741 aa20.64■□□□□ 0.89
SGPP1-201ENST00000247225 DCTPP1Q9H773 170 aa20.64■□□□□ 0.89
SGPP1-201ENST00000247225 GPT2Q8TD30 523 aa20.64■□□□□ 0.89
SGPP1-201ENST00000247225 CHMP3Q9Y3E7 222 aa20.64■□□□□ 0.89
SGPP1-201ENST00000247225 TET3O43151 1660 aa20.63■□□□□ 0.89
SGPP1-201ENST00000247225 SHPRHQ149N8 1683 aa20.63■□□□□ 0.89
SGPP1-201ENST00000247225 CEP85Q6P2H3 762 aa20.62■□□□□ 0.89
SGPP1-201ENST00000247225 TMEM63CQ9P1W3 806 aa20.62■□□□□ 0.89
SGPP1-201ENST00000247225 IL13P35225 146 aa20.62■□□□□ 0.89
SGPP1-201ENST00000247225 REC8O95072 547 aa20.61■□□□□ 0.89
SGPP1-201ENST00000247225 HSP90AB2PQ58FF8 381 aa20.61■□□□□ 0.89
SGPP1-201ENST00000247225 C14orf37Q86TY3 774 aa20.61■□□□□ 0.89
SGPP1-201ENST00000247225 FAM177BA6PVY3 158 aa20.61■□□□□ 0.89
SGPP1-201ENST00000247225 PTMSP20962 102 aa20.61■□□□□ 0.89
SGPP1-201ENST00000247225 RTF1Q92541 710 aaKnown RBP20.61■□□□□ 0.89
SGPP1-201ENST00000247225 TSPYL4Q9UJ04 414 aa20.61■□□□□ 0.89
SGPP1-201ENST00000247225 TULP4Q9NRJ4 1543 aa20.6■□□□□ 0.89
SGPP1-201ENST00000247225 ERC2O15083 957 aa20.6■□□□□ 0.89
SGPP1-201ENST00000247225 FKBP5Q13451 457 aaPredicted RBP20.6■□□□□ 0.89
SGPP1-201ENST00000247225 TSC1Q92574 1164 aa20.6■□□□□ 0.89
SGPP1-201ENST00000247225 JARID2Q92833 1246 aaPredicted RBP20.6■□□□□ 0.89
SGPP1-201ENST00000247225 ISY1Q9ULR0 285 aaKnown RBP20.6■□□□□ 0.89
SGPP1-201ENST00000247225 KIF1BO60333 1816 aa20.6■□□□□ 0.89
SGPP1-201ENST00000247225 LMOD3Q0VAK6 560 aa20.6■□□□□ 0.89
SGPP1-201ENST00000247225 TMX3Q96JJ7 454 aa20.59■□□□□ 0.89
SGPP1-201ENST00000247225 ANKRD44Q8N8A2 993 aa20.59■□□□□ 0.89
SGPP1-201ENST00000247225 NUDT16Q96DE0 195 aaKnown RBP20.59■□□□□ 0.89
SGPP1-201ENST00000247225 PALD1Q9ULE6 856 aa20.59■□□□□ 0.89
SGPP1-201ENST00000247225 ARHGAP45Q92619 1136 aa20.58■□□□□ 0.89
SGPP1-201ENST00000247225 ZMYM3Q14202 1370 aa20.58■□□□□ 0.89
SGPP1-201ENST00000247225 MROH2AA6NES4 1674 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms