RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 USP47Q96K76 1375 aa15.6■□□□□ 0.09
NEK9-201ENST00000238616 CCDC57Q2TAC2 916 aa15.6■□□□□ 0.09
NEK9-201ENST00000238616 CECR2Q9BXF3 1484 aa15.6■□□□□ 0.09
NEK9-201ENST00000238616 KIAA1328Q86T90 577 aa15.6■□□□□ 0.09
NEK9-201ENST00000238616 FAM69CQ0P6D2 419 aa15.6■□□□□ 0.09
NEK9-201ENST00000238616 GPRASP1Q5JY77 1395 aa15.6■□□□□ 0.09
NEK9-201ENST00000238616 TRMT1LQ7Z2T5 733 aaKnown RBP15.6■□□□□ 0.09
NEK9-201ENST00000238616 CCDC85AQ96PX6 553 aaPredicted RBP15.59■□□□□ 0.09
NEK9-201ENST00000238616 GRM1Q13255 1194 aa15.59■□□□□ 0.09
NEK9-201ENST00000238616 GNAI1P63096 354 aa15.59■□□□□ 0.09
NEK9-201ENST00000238616 NACAP1Q9BZK3 213 aa15.58■□□□□ 0.09
NEK9-201ENST00000238616 GOPCQ9HD26 462 aa15.58■□□□□ 0.09
NEK9-201ENST00000238616 NEK4P51957 841 aa15.58■□□□□ 0.09
NEK9-201ENST00000238616 RSPH4AQ5TD94 716 aa15.58■□□□□ 0.08
NEK9-201ENST00000238616 AK9Q5TCS8 1911 aa15.58■□□□□ 0.08
NEK9-201ENST00000238616 TSPY26PQ9H489 355 aa15.58■□□□□ 0.08
NEK9-201ENST00000238616 CCP110O43303 1012 aa15.58■□□□□ 0.08
NEK9-201ENST00000238616 CCDC91Q7Z6B0 441 aa15.57■□□□□ 0.08
NEK9-201ENST00000238616 FHOD3Q2V2M9 1422 aa15.57■□□□□ 0.08
NEK9-201ENST00000238616 PRPF40AO75400 957 aaKnown RBP15.57■□□□□ 0.08
NEK9-201ENST00000238616 PDS5BQ9NTI5 1447 aa15.57■□□□□ 0.08
NEK9-201ENST00000238616 GGNBP2Q9H3C7 697 aa15.57■□□□□ 0.08
NEK9-201ENST00000238616 LRP2BPQ9P2M1 347 aa15.57■□□□□ 0.08
NEK9-201ENST00000238616 LETM1O95202 739 aaPredicted RBP15.57■□□□□ 0.08
NEK9-201ENST00000238616 MAPK8IP2Q13387 824 aaPredicted RBP15.57■□□□□ 0.08
NEK9-201ENST00000238616 LIG1P18858 919 aa15.57■□□□□ 0.08
NEK9-201ENST00000238616 CEP63Q96MT8 703 aa15.57■□□□□ 0.08
NEK9-201ENST00000238616 LRRCC1Q9C099 1032 aa15.57■□□□□ 0.08
NEK9-201ENST00000238616 RBM10P98175 930 aaKnown RBP15.56■□□□□ 0.08
NEK9-201ENST00000238616 HIP1O00291 1037 aa15.56■□□□□ 0.08
NEK9-201ENST00000238616 BMP2KQ9NSY1 1161 aaPredicted RBP15.56■□□□□ 0.08
NEK9-201ENST00000238616 ANKIB1Q9P2G1 1089 aa15.56■□□□□ 0.08
NEK9-201ENST00000238616 TNMDQ9H2S6 317 aa15.56■□□□□ 0.08
NEK9-201ENST00000238616 CTNNBL1Q8WYA6 563 aaPredicted RBP15.56■□□□□ 0.08
NEK9-201ENST00000238616 MACROD2A1Z1Q3 448 aa15.55■□□□□ 0.08
NEK9-201ENST00000238616 POTEJP0CG39 1038 aa15.55■□□□□ 0.08
NEK9-201ENST00000238616 UBA5Q9GZZ9 404 aa15.55■□□□□ 0.08
NEK9-201ENST00000238616 PDCP20941 246 aa15.55■□□□□ 0.08
NEK9-201ENST00000238616 PPP4R3AQ6IN85 833 aa15.55■□□□□ 0.08
NEK9-201ENST00000238616 INCENPQ9NQS7 918 aa15.55■□□□□ 0.08
NEK9-201ENST00000238616 KIF7Q2M1P5 1343 aa15.55■□□□□ 0.08
NEK9-201ENST00000238616 DNAI2Q9GZS0 605 aa15.55■□□□□ 0.08
NEK9-201ENST00000238616 JMYQ8N9B5 988 aa15.55■□□□□ 0.08
NEK9-201ENST00000238616 TNNT1P13805 278 aa15.55■□□□□ 0.08
NEK9-201ENST00000238616 MAP2K1Q02750 393 aaPredicted RBP15.55■□□□□ 0.08
NEK9-201ENST00000238616 PIP4K2AP48426 406 aaPredicted RBP15.55■□□□□ 0.08
NEK9-201ENST00000238616 UBE4AQ14139 1066 aa15.55■□□□□ 0.08
NEK9-201ENST00000238616 DHX8Q14562 1220 aaKnown RBP15.55■□□□□ 0.08
NEK9-201ENST00000238616 RABEP1Q15276 862 aa15.55■□□□□ 0.08
NEK9-201ENST00000238616 HOMER2Q9NSB8 354 aa15.55■□□□□ 0.08
NEK9-201ENST00000238616 WDHD1O75717 1129 aaPredicted RBP15.54■□□□□ 0.08
NEK9-201ENST00000238616 ABCF2Q9UG63 623 aa15.54■□□□□ 0.08
NEK9-201ENST00000238616 CDC45O75419 566 aa15.54■□□□□ 0.08
NEK9-201ENST00000238616 CEP57L1Q8IYX8 460 aa15.54■□□□□ 0.08
NEK9-201ENST00000238616 SEC63Q9UGP8 760 aaKnown RBP15.54■□□□□ 0.08
NEK9-201ENST00000238616 MTHFSP49914 203 aa15.54■□□□□ 0.08
NEK9-201ENST00000238616 JAKMIP3Q5VZ66 844 aa15.54■□□□□ 0.08
NEK9-201ENST00000238616 UBAC1Q9BSL1 405 aa15.54■□□□□ 0.08
NEK9-201ENST00000238616 SERPINA10Q9UK55 444 aa15.54■□□□□ 0.08
NEK9-201ENST00000238616 MRPS9P82933 396 aaKnown RBP15.53■□□□□ 0.08
NEK9-201ENST00000238616 TNIP1Q15025 636 aa15.53■□□□□ 0.08
NEK9-201ENST00000238616 CCDC150Q8NCX0 1101 aa15.53■□□□□ 0.08
NEK9-201ENST00000238616 RAI14Q9P0K7 980 aa15.53■□□□□ 0.08
NEK9-201ENST00000238616 BCCIPQ9P287 314 aaKnown RBP eCLIP15.53■□□□□ 0.08
NEK9-201ENST00000238616 ZNF219Q9P2Y4 722 aaPredicted RBP15.53■□□□□ 0.08
NEK9-201ENST00000238616 CFAP45Q9UL16 551 aa15.53■□□□□ 0.08
NEK9-201ENST00000238616 TMEM132EQ6IEE7 984 aa15.53■□□□□ 0.08
NEK9-201ENST00000238616 STAMBPO95630 424 aa15.53■□□□□ 0.08
NEK9-201ENST00000238616 TXLNBQ8N3L3 684 aa15.53■□□□□ 0.08
NEK9-201ENST00000238616 DDX23Q9BUQ8 820 aaKnown RBP15.53■□□□□ 0.08
NEK9-201ENST00000238616 DACH1Q9UI36 760 aa15.53■□□□□ 0.08
NEK9-201ENST00000238616 TATP17735 454 aaPredicted RBP15.53■□□□□ 0.08
NEK9-201ENST00000238616 DNA2P51530 1060 aa15.53■□□□□ 0.08
NEK9-201ENST00000238616 VPS8Q8N3P4 1428 aa15.52■□□□□ 0.08
NEK9-201ENST00000238616 EIF5P55010 431 aaKnown RBP15.52■□□□□ 0.08
NEK9-201ENST00000238616 PLEKHO1Q53GL0 409 aaPredicted RBP15.52■□□□□ 0.08
NEK9-201ENST00000238616 GNAI2P04899 355 aa15.52■□□□□ 0.07
NEK9-201ENST00000238616 PODXL2Q9NZ53 605 aa15.52■□□□□ 0.07
NEK9-201ENST00000238616 ECM2O94769 699 aaPredicted RBP15.52■□□□□ 0.07
NEK9-201ENST00000238616 CRACR2BQ8N4Y2 399 aaPredicted RBP15.52■□□□□ 0.07
NEK9-201ENST00000238616 ZNF397Q8NF99 534 aaPredicted RBP15.52■□□□□ 0.07
NEK9-201ENST00000238616 CCDC66A2RUB6 948 aa15.51■□□□□ 0.07
NEK9-201ENST00000238616 TMOD2Q9NZR1 351 aa15.51■□□□□ 0.07
NEK9-201ENST00000238616 ERICH4A6NGS2 130 aa15.51■□□□□ 0.07
NEK9-201ENST00000238616 NOL7Q9UMY1 257 aaKnown RBP15.51■□□□□ 0.07
NEK9-201ENST00000238616 DHX57Q6P158 1386 aaKnown RBP15.5■□□□□ 0.07
NEK9-201ENST00000238616 SLC4A8Q2Y0W8 1093 aa15.5■□□□□ 0.07
NEK9-201ENST00000238616 IQCEQ6IPM2 695 aa15.5■□□□□ 0.07
NEK9-201ENST00000238616 PROSER2Q86WR7 435 aaPredicted RBP15.5■□□□□ 0.07
NEK9-201ENST00000238616 CCDC102AQ96A19 550 aa15.5■□□□□ 0.07
NEK9-201ENST00000238616 SLC26A8Q96RN1 970 aa15.5■□□□□ 0.07
NEK9-201ENST00000238616 GSTTP1A0A1W2PQM5 241 aa15.5■□□□□ 0.07
NEK9-201ENST00000238616 PPP1R12BO60237 982 aaPredicted RBP15.5■□□□□ 0.07
NEK9-201ENST00000238616 JPH4Q96JJ6 628 aa15.5■□□□□ 0.07
NEK9-201ENST00000238616 CYP46A1Q9Y6A2 500 aa15.5■□□□□ 0.07
NEK9-201ENST00000238616 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.49■□□□□ 0.07
NEK9-201ENST00000238616 ZPR1O75312 459 aa15.49■□□□□ 0.07
NEK9-201ENST00000238616 MINDY4BA8MYZ0 360 aa15.49■□□□□ 0.07
NEK9-201ENST00000238616 XPCQ01831 940 aaPredicted RBP15.49■□□□□ 0.07
NEK9-201ENST00000238616 CCDC178Q5BJE1 867 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms