RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 MCM2P49736 904 aa20.59■□□□□ 0.89
SLC1A4-201ENST00000234256 TRIM5Q9C035 493 aa20.58■□□□□ 0.89
SLC1A4-201ENST00000234256 TMX4Q9H1E5 349 aaPredicted RBP20.58■□□□□ 0.89
SLC1A4-201ENST00000234256 RPGRIP1LQ68CZ1 1315 aa20.58■□□□□ 0.89
SLC1A4-201ENST00000234256 CWC27Q6UX04 472 aaKnown RBP20.58■□□□□ 0.88
SLC1A4-201ENST00000234256 PSMA5P28066 241 aa20.58■□□□□ 0.88
SLC1A4-201ENST00000234256 RPAP2Q8IXW5 612 aaPredicted RBP20.57■□□□□ 0.88
SLC1A4-201ENST00000234256 DDX54Q8TDD1 881 aaKnown RBP20.57■□□□□ 0.88
SLC1A4-201ENST00000234256 GRIN2AQ12879 1464 aa20.57■□□□□ 0.88
SLC1A4-201ENST00000234256 NUTM1Q86Y26 1132 aa20.57■□□□□ 0.88
SLC1A4-201ENST00000234256 SPC24Q8NBT2 197 aa20.57■□□□□ 0.88
SLC1A4-201ENST00000234256 LRPPRCP42704 1394 aaKnown RBP20.57■□□□□ 0.88
SLC1A4-201ENST00000234256 FYB1O15117 783 aa20.56■□□□□ 0.88
SLC1A4-201ENST00000234256 GPRASP1Q5JY77 1395 aa20.56■□□□□ 0.88
SLC1A4-201ENST00000234256 NKTRP30414 1462 aaKnown RBP20.56■□□□□ 0.88
SLC1A4-201ENST00000234256 RBM10P98175 930 aaKnown RBP20.55■□□□□ 0.88
SLC1A4-201ENST00000234256 PROSER2Q86WR7 435 aaPredicted RBP20.55■□□□□ 0.88
SLC1A4-201ENST00000234256 ZNF608Q9ULD9 1512 aaPredicted RBP20.55■□□□□ 0.88
SLC1A4-201ENST00000234256 MTMR7Q9Y216 660 aa20.55■□□□□ 0.88
SLC1A4-201ENST00000234256 THOC2Q8NI27 1593 aaKnown RBP20.55■□□□□ 0.88
SLC1A4-201ENST00000234256 TSR1Q2NL82 804 aaKnown RBP20.55■□□□□ 0.88
SLC1A4-201ENST00000234256 RBM33Q96EV2 1170 aaKnown RBP20.54■□□□□ 0.88
SLC1A4-201ENST00000234256 TSPY26PQ9H489 355 aa20.54■□□□□ 0.88
SLC1A4-201ENST00000234256 TNNT3P45378 269 aaPredicted RBP20.54■□□□□ 0.88
SLC1A4-201ENST00000234256 PCDHB15Q9Y5E8 787 aa20.54■□□□□ 0.88
SLC1A4-201ENST00000234256 DHX16O60231 1041 aaKnown RBP20.54■□□□□ 0.88
SLC1A4-201ENST00000234256 CYP46A1Q9Y6A2 500 aa20.54■□□□□ 0.88
SLC1A4-201ENST00000234256 CCDC39Q9UFE4 941 aa20.53■□□□□ 0.88
SLC1A4-201ENST00000234256 STK11IPQ8N1F8 1099 aa20.53■□□□□ 0.88
SLC1A4-201ENST00000234256 CWC22Q9HCG8 908 aaKnown RBP20.53■□□□□ 0.88
SLC1A4-201ENST00000234256 FAM83GA6ND36 823 aa20.53■□□□□ 0.88
SLC1A4-201ENST00000234256 ESPNB1AK53 854 aa20.53■□□□□ 0.88
SLC1A4-201ENST00000234256 PDCP20941 246 aa20.53■□□□□ 0.88
SLC1A4-201ENST00000234256 ZC3H6P61129 1189 aaKnown RBP20.53■□□□□ 0.88
SLC1A4-201ENST00000234256 AACSQ86V21 672 aa20.52■□□□□ 0.88
SLC1A4-201ENST00000234256 STRN4Q9NRL3 753 aa20.52■□□□□ 0.88
SLC1A4-201ENST00000234256 TNNQ9UQP3 1299 aa20.52■□□□□ 0.88
SLC1A4-201ENST00000234256 GOLGA6L1Q8N7Z2 621 aa20.52■□□□□ 0.88
SLC1A4-201ENST00000234256 FERMT3Q86UX7 667 aa20.51■□□□□ 0.87
SLC1A4-201ENST00000234256 TPM1P09493 284 aa20.51■□□□□ 0.87
SLC1A4-201ENST00000234256 USHBP1Q8N6Y0 703 aa20.51■□□□□ 0.87
SLC1A4-201ENST00000234256 RBM42Q9BTD8 480 aaKnown RBP20.51■□□□□ 0.87
SLC1A4-201ENST00000234256 LARP1BQ659C4 914 aaKnown RBP20.51■□□□□ 0.87
SLC1A4-201ENST00000234256 SAFBQ15424 915 aaKnown RBP eCLIP20.51■□□□□ 0.87
SLC1A4-201ENST00000234256 JAKMIP1Q96N16 626 aaKnown RBP20.5■□□□□ 0.87
SLC1A4-201ENST00000234256 ERICH2A1L162 156 aa20.5■□□□□ 0.87
SLC1A4-201ENST00000234256 KINO60870 393 aaKnown RBP20.5■□□□□ 0.87
SLC1A4-201ENST00000234256 PCMTD1Q96MG8 357 aaPredicted RBP20.5■□□□□ 0.87
SLC1A4-201ENST00000234256 CCDC85AQ96PX6 553 aaPredicted RBP20.5■□□□□ 0.87
SLC1A4-201ENST00000234256 CIZ1Q9ULV3 898 aaPredicted RBP20.5■□□□□ 0.87
SLC1A4-201ENST00000234256 THEMISQ8N1K5 641 aaPredicted RBP20.5■□□□□ 0.87
SLC1A4-201ENST00000234256 CCDC173Q0VFZ6 552 aa20.49■□□□□ 0.87
SLC1A4-201ENST00000234256 RRP12Q5JTH9 1297 aaKnown RBP20.49■□□□□ 0.87
SLC1A4-201ENST00000234256 LARP6Q9BRS8 491 aaKnown RBP20.49■□□□□ 0.87
SLC1A4-201ENST00000234256 WDR33Q9C0J8 1336 aaKnown RBP20.49■□□□□ 0.87
SLC1A4-201ENST00000234256 SSFA2P28290 1259 aa20.48■□□□□ 0.87
SLC1A4-201ENST00000234256 ZNF771Q7L3S4 317 aaPredicted RBP20.48■□□□□ 0.87
SLC1A4-201ENST00000234256 SYCE3A1L190 88 aa20.47■□□□□ 0.87
SLC1A4-201ENST00000234256 TATP17735 454 aaPredicted RBP20.47■□□□□ 0.87
SLC1A4-201ENST00000234256 TSHZ3Q63HK5 1081 aa20.47■□□□□ 0.87
SLC1A4-201ENST00000234256 ERC1Q8IUD2 1116 aa20.47■□□□□ 0.87
SLC1A4-201ENST00000234256 BTBD11A6QL63 1104 aa20.47■□□□□ 0.87
SLC1A4-201ENST00000234256 BLOC1S2Q6QNY1 142 aa20.47■□□□□ 0.87
SLC1A4-201ENST00000234256 GPATCH8Q9UKJ3 1502 aaKnown RBP20.46■□□□□ 0.87
SLC1A4-201ENST00000234256 A0A0U1RQG5 324 aaPredicted RBP20.46■□□□□ 0.87
SLC1A4-201ENST00000234256 PDILTQ8N807 584 aa20.46■□□□□ 0.87
SLC1A4-201ENST00000234256 ALDH1L2Q3SY69 923 aa20.45■□□□□ 0.86
SLC1A4-201ENST00000234256 NOS1P29475 1434 aa20.45■□□□□ 0.86
SLC1A4-201ENST00000234256 MX1P20591 662 aa20.45■□□□□ 0.86
SLC1A4-201ENST00000234256 CTTNBP2Q8WZ74 1663 aa20.45■□□□□ 0.86
SLC1A4-201ENST00000234256 GNAT3A8MTJ3 354 aa20.44■□□□□ 0.86
SLC1A4-201ENST00000234256 IPO7O95373 1038 aaKnown RBP20.44■□□□□ 0.86
SLC1A4-201ENST00000234256 TESK2Q96S53 571 aa20.44■□□□□ 0.86
SLC1A4-201ENST00000234256 FKBP4Q02790 459 aaKnown RBP eCLIP20.44■□□□□ 0.86
SLC1A4-201ENST00000234256 STK38Q15208 465 aa20.44■□□□□ 0.86
SLC1A4-201ENST00000234256 KRT85P78386 507 aa20.44■□□□□ 0.86
SLC1A4-201ENST00000234256 TAF7Q15545 349 aaPredicted RBP20.44■□□□□ 0.86
SLC1A4-201ENST00000234256 TNPO1Q92973 898 aaKnown RBP20.44■□□□□ 0.86
SLC1A4-201ENST00000234256 HIP1O00291 1037 aa20.43■□□□□ 0.86
SLC1A4-201ENST00000234256 DDX11Q96FC9 970 aa20.43■□□□□ 0.86
SLC1A4-201ENST00000234256 C14orf93Q9H972 538 aaKnown RBP20.43■□□□□ 0.86
SLC1A4-201ENST00000234256 ME1P48163 572 aa20.43■□□□□ 0.86
SLC1A4-201ENST00000234256 TBC1D9Q6ZT07 1266 aa20.43■□□□□ 0.86
SLC1A4-201ENST00000234256 NOL10Q9BSC4 688 aaKnown RBP20.43■□□□□ 0.86
SLC1A4-201ENST00000234256 CABP4P57796 275 aa20.43■□□□□ 0.86
SLC1A4-201ENST00000234256 GDPD2Q9HCC8 539 aa20.43■□□□□ 0.86
SLC1A4-201ENST00000234256 HOOK1Q9UJC3 728 aaKnown RBP20.43■□□□□ 0.86
SLC1A4-201ENST00000234256 SMC2O95347 1197 aa20.42■□□□□ 0.86
SLC1A4-201ENST00000234256 PDRG1Q9NUG6 133 aa20.42■□□□□ 0.86
SLC1A4-201ENST00000234256 CASTP20810 708 aaKnown RBP20.42■□□□□ 0.86
SLC1A4-201ENST00000234256 RLBP1P12271 317 aa20.42■□□□□ 0.86
SLC1A4-201ENST00000234256 MNS1Q8NEH6 495 aa20.42■□□□□ 0.86
SLC1A4-201ENST00000234256 ANKRD20A12PQ8NF67 263 aa20.42■□□□□ 0.86
SLC1A4-201ENST00000234256 SCAF11Q99590 1463 aaKnown RBP20.42■□□□□ 0.86
SLC1A4-201ENST00000234256 LRRFIP2Q9Y608 721 aaKnown RBP20.41■□□□□ 0.86
SLC1A4-201ENST00000234256 TTLL5Q6EMB2 1281 aa20.41■□□□□ 0.86
SLC1A4-201ENST00000234256 SAMD1Q6SPF0 538 aaPredicted RBP20.41■□□□□ 0.86
SLC1A4-201ENST00000234256 TNMDQ9H2S6 317 aa20.41■□□□□ 0.86
SLC1A4-201ENST00000234256 CNNM1Q9NRU3 951 aa20.41■□□□□ 0.86
SLC1A4-201ENST00000234256 CEBPAP49715 358 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms