RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 BTBD11A6QL63 1104 aa15.71■□□□□ 0.11
COL1A1-201ENST00000225964 TDO2P48775 406 aa15.71■□□□□ 0.11
COL1A1-201ENST00000225964 FGD6Q6ZV73 1430 aa15.71■□□□□ 0.11
COL1A1-201ENST00000225964 AFAP1Q8N556 730 aa15.71■□□□□ 0.11
COL1A1-201ENST00000225964 NEBLO76041 1014 aa15.71■□□□□ 0.1
COL1A1-201ENST00000225964 SEPT7Q16181 437 aaKnown RBP15.71■□□□□ 0.1
COL1A1-201ENST00000225964 CAVIN1Q6NZI2 390 aaKnown RBP15.7■□□□□ 0.1
COL1A1-201ENST00000225964 SERPINC1P01008 464 aa15.7■□□□□ 0.1
COL1A1-201ENST00000225964 AAMPQ13685 434 aa15.7■□□□□ 0.1
COL1A1-201ENST00000225964 ERLIN2O94905 339 aa15.7■□□□□ 0.1
COL1A1-201ENST00000225964 NASPP49321 788 aaPredicted RBP15.7■□□□□ 0.1
COL1A1-201ENST00000225964 FIBPO43427 364 aa15.7■□□□□ 0.1
COL1A1-201ENST00000225964 SSBP05455 408 aaKnown RBP eCLIP15.7■□□□□ 0.1
COL1A1-201ENST00000225964 CALRP27797 417 aaKnown RBP15.7■□□□□ 0.1
COL1A1-201ENST00000225964 LRRCC1Q9C099 1032 aa15.7■□□□□ 0.1
COL1A1-201ENST00000225964 CYP46A1Q9Y6A2 500 aa15.7■□□□□ 0.1
COL1A1-201ENST00000225964 USP5P45974 858 aa15.69■□□□□ 0.1
COL1A1-201ENST00000225964 CHMP4BP1P59074 171 aa15.69■□□□□ 0.1
COL1A1-201ENST00000225964 PRDM11Q9NQV5 511 aa15.69■□□□□ 0.1
COL1A1-201ENST00000225964 PDCP20941 246 aa15.69■□□□□ 0.1
COL1A1-201ENST00000225964 TSR2Q969E8 191 aaKnown RBP15.69■□□□□ 0.1
COL1A1-201ENST00000225964 CCT4P50991 539 aaKnown RBP15.69■□□□□ 0.1
COL1A1-201ENST00000225964 NOL7Q9UMY1 257 aaKnown RBP15.69■□□□□ 0.1
COL1A1-201ENST00000225964 ZRSR2Q15696 482 aaKnown RBP15.68■□□□□ 0.1
COL1A1-201ENST00000225964 FAM43AQ8N2R8 423 aa15.68■□□□□ 0.1
COL1A1-201ENST00000225964 CCDC191Q8NCU4 936 aa15.68■□□□□ 0.1
COL1A1-201ENST00000225964 AACSQ86V21 672 aa15.68■□□□□ 0.1
COL1A1-201ENST00000225964 CCP110O43303 1012 aa15.68■□□□□ 0.1
COL1A1-201ENST00000225964 PRPF40AO75400 957 aaKnown RBP15.68■□□□□ 0.1
COL1A1-201ENST00000225964 ANKLE2Q86XL3 938 aa15.68■□□□□ 0.1
COL1A1-201ENST00000225964 JMYQ8N9B5 988 aa15.68■□□□□ 0.1
COL1A1-201ENST00000225964 CABP1Q9NZU7 370 aa15.68■□□□□ 0.1
COL1A1-201ENST00000225964 SPC24Q8NBT2 197 aa15.68■□□□□ 0.1
COL1A1-201ENST00000225964 CCDC85AQ96PX6 553 aaPredicted RBP15.68■□□□□ 0.1
COL1A1-201ENST00000225964 PPP2R1AP30153 589 aa15.68■□□□□ 0.1
COL1A1-201ENST00000225964 IGHMBP2P38935 993 aaKnown RBP15.68■□□□□ 0.1
COL1A1-201ENST00000225964 DACH1Q9UI36 760 aa15.68■□□□□ 0.1
COL1A1-201ENST00000225964 LRP2BPQ9P2M1 347 aa15.67■□□□□ 0.1
COL1A1-201ENST00000225964 RTEL1-TNFRSF6BF6WH68 1400 aa15.67■□□□□ 0.1
COL1A1-201ENST00000225964 PDZRN3Q9UPQ7 1066 aa15.67■□□□□ 0.1
COL1A1-201ENST00000225964 H0YHG0 523 aa15.67■□□□□ 0.1
COL1A1-201ENST00000225964 PPFIBP1Q86W92 1011 aa15.67■□□□□ 0.1
COL1A1-201ENST00000225964 SRCIN1Q9C0H9 1055 aa15.67■□□□□ 0.1
COL1A1-201ENST00000225964 TMOD2Q9NZR1 351 aa15.67■□□□□ 0.1
COL1A1-201ENST00000225964 SYNJ2O15056 1496 aa15.67■□□□□ 0.1
COL1A1-201ENST00000225964 ANKRD1Q15327 319 aa15.67■□□□□ 0.1
COL1A1-201ENST00000225964 CCDC181Q5TID7 509 aa15.67■□□□□ 0.1
COL1A1-201ENST00000225964 ANKRD18AQ8IVF6 992 aa15.66■□□□□ 0.1
COL1A1-201ENST00000225964 GCC1Q96CN9 775 aa15.66■□□□□ 0.1
COL1A1-201ENST00000225964 UBAC1Q9BSL1 405 aa15.66■□□□□ 0.1
COL1A1-201ENST00000225964 ZNF692Q9BU19 519 aaPredicted RBP15.66■□□□□ 0.1
COL1A1-201ENST00000225964 PAXIP1Q6ZW49 1069 aaPredicted RBP15.66■□□□□ 0.1
COL1A1-201ENST00000225964 ME1P48163 572 aa15.66■□□□□ 0.1
COL1A1-201ENST00000225964 MCM2P49736 904 aa15.66■□□□□ 0.1
COL1A1-201ENST00000225964 VSIG10Q8N0Z9 540 aa15.66■□□□□ 0.1
COL1A1-201ENST00000225964 AXDND1Q5T1B0 1012 aaPredicted RBP15.65■□□□□ 0.1
COL1A1-201ENST00000225964 CCDC97Q96F63 343 aaPredicted RBP15.65■□□□□ 0.1
COL1A1-201ENST00000225964 ENOX2Q16206 610 aaKnown RBP15.65■□□□□ 0.1
COL1A1-201ENST00000225964 DESP17661 470 aa15.65■□□□□ 0.1
COL1A1-201ENST00000225964 LUC7LQ9NQ29 371 aaKnown RBP15.65■□□□□ 0.1
COL1A1-201ENST00000225964 BRD4O60885 1362 aaPredicted RBP15.65■□□□□ 0.1
COL1A1-201ENST00000225964 AEBP1Q8IUX7 1158 aa15.65■□□□□ 0.1
COL1A1-201ENST00000225964 SCAPERQ9BY12 1400 aa15.64■□□□□ 0.09
COL1A1-201ENST00000225964 PPM1FP49593 454 aaPredicted RBP15.64■□□□□ 0.09
COL1A1-201ENST00000225964 RRS1Q15050 365 aaKnown RBP15.64■□□□□ 0.09
COL1A1-201ENST00000225964 SLC26A8Q96RN1 970 aa15.64■□□□□ 0.09
COL1A1-201ENST00000225964 RABEP1Q15276 862 aa15.63■□□□□ 0.09
COL1A1-201ENST00000225964 SCLT1Q96NL6 688 aa15.63■□□□□ 0.09
COL1A1-201ENST00000225964 BMP2KQ9NSY1 1161 aaPredicted RBP15.63■□□□□ 0.09
COL1A1-201ENST00000225964 NCOA2Q15596 1464 aa15.63■□□□□ 0.09
COL1A1-201ENST00000225964 ZPR1O75312 459 aa15.63■□□□□ 0.09
COL1A1-201ENST00000225964 TTLL12Q14166 644 aaPredicted RBP15.63■□□□□ 0.09
COL1A1-201ENST00000225964 CDCA7LQ96GN5 454 aa15.63■□□□□ 0.09
COL1A1-201ENST00000225964 TNMDQ9H2S6 317 aa15.63■□□□□ 0.09
COL1A1-201ENST00000225964 MYCNP04198 464 aaPredicted RBP15.63■□□□□ 0.09
COL1A1-201ENST00000225964 ZC3H6P61129 1189 aaKnown RBP15.63■□□□□ 0.09
COL1A1-201ENST00000225964 PRG4Q92954 1404 aaPredicted RBP15.63■□□□□ 0.09
COL1A1-201ENST00000225964 GOLGA6L10A6NI86 522 aa15.63■□□□□ 0.09
COL1A1-201ENST00000225964 BCAR3O75815 825 aa15.63■□□□□ 0.09
COL1A1-201ENST00000225964 SSR1P43307 286 aaKnown RBP15.63■□□□□ 0.09
COL1A1-201ENST00000225964 TRIM21P19474 475 aaKnown RBP15.62■□□□□ 0.09
COL1A1-201ENST00000225964 CDKL5O76039 1030 aa15.62■□□□□ 0.09
COL1A1-201ENST00000225964 IDH1O75874 414 aaKnown RBP15.62■□□□□ 0.09
COL1A1-201ENST00000225964 STARD3NLO95772 234 aa15.62■□□□□ 0.09
COL1A1-201ENST00000225964 MBD3O95983 291 aa15.62■□□□□ 0.09
COL1A1-201ENST00000225964 CRACR2BQ8N4Y2 399 aaPredicted RBP15.61■□□□□ 0.09
COL1A1-201ENST00000225964 SLC12A5Q9H2X9 1139 aa15.61■□□□□ 0.09
COL1A1-201ENST00000225964 TSPYL1Q9H0U9 437 aa15.61■□□□□ 0.09
COL1A1-201ENST00000225964 CEP126Q9P2H0 1117 aa15.61■□□□□ 0.09
COL1A1-201ENST00000225964 CWC27Q6UX04 472 aaKnown RBP15.61■□□□□ 0.09
COL1A1-201ENST00000225964 ABCF2Q9UG63 623 aa15.61■□□□□ 0.09
COL1A1-201ENST00000225964 TRAK2O60296 914 aa15.61■□□□□ 0.09
COL1A1-201ENST00000225964 POLR3DP05423 398 aaPredicted RBP15.61■□□□□ 0.09
COL1A1-201ENST00000225964 TXLNBQ8N3L3 684 aa15.61■□□□□ 0.09
COL1A1-201ENST00000225964 ZNF652Q9Y2D9 606 aa15.61■□□□□ 0.09
COL1A1-201ENST00000225964 CEP57L1Q8IYX8 460 aa15.6■□□□□ 0.09
COL1A1-201ENST00000225964 PLCD4Q9BRC7 762 aa15.6■□□□□ 0.09
COL1A1-201ENST00000225964 CT47B1P0C2W7 299 aaPredicted RBP15.6■□□□□ 0.09
COL1A1-201ENST00000225964 SRGAP3O43295 1099 aa15.6■□□□□ 0.09
COL1A1-201ENST00000225964 PDRG1Q9NUG6 133 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms