RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 EVA1CP58658 441 aa24.09■■□□□ 1.45
MRPL28-201ENST00000199706 BARGINQ6ZT62 677 aa24.09■■□□□ 1.45
MRPL28-201ENST00000199706 THRAP3Q9Y2W1 955 aaKnown RBP24.09■■□□□ 1.45
MRPL28-201ENST00000199706 ANKRD26Q9UPS8 1709 aa24.09■■□□□ 1.45
MRPL28-201ENST00000199706 BLMP54132 1417 aaPredicted RBP24.09■■□□□ 1.45
MRPL28-201ENST00000199706 STRN4Q9NRL3 753 aa24.08■■□□□ 1.45
MRPL28-201ENST00000199706 CGNL1Q0VF96 1302 aa24.08■■□□□ 1.44
MRPL28-201ENST00000199706 WDR17Q8IZU2 1322 aa24.08■■□□□ 1.44
MRPL28-201ENST00000199706 SEPT12Q8IYM1 358 aa24.07■■□□□ 1.44
MRPL28-201ENST00000199706 FAM208AQ9UK61 1670 aaKnown RBP24.07■■□□□ 1.44
MRPL28-201ENST00000199706 RTL1A6NKG5 1358 aa24.06■■□□□ 1.44
MRPL28-201ENST00000199706 WNK3Q9BYP7 1800 aa24.06■■□□□ 1.44
MRPL28-201ENST00000199706 C11orf95C9JLR9 678 aaPredicted RBP24.06■■□□□ 1.44
MRPL28-201ENST00000199706 LARP1Q6PKG0 1096 aaKnown RBP24.06■■□□□ 1.44
MRPL28-201ENST00000199706 KIF7Q2M1P5 1343 aa24.06■■□□□ 1.44
MRPL28-201ENST00000199706 KIF24Q5T7B8 1368 aa24.05■■□□□ 1.44
MRPL28-201ENST00000199706 PARP4Q9UKK3 1724 aaKnown RBP24.05■■□□□ 1.44
MRPL28-201ENST00000199706 AXIN2Q9Y2T1 843 aa24.05■■□□□ 1.44
MRPL28-201ENST00000199706 NSD2O96028 1365 aa24.04■■□□□ 1.44
MRPL28-201ENST00000199706 SOX12O15370 315 aa24.04■■□□□ 1.44
MRPL28-201ENST00000199706 FAM98CQ17RN3 349 aaKnown RBP24.04■■□□□ 1.44
MRPL28-201ENST00000199706 TCP11L2Q8N4U5 519 aa24.04■■□□□ 1.44
MRPL28-201ENST00000199706 ERBB3P21860 1342 aa24.03■■□□□ 1.44
MRPL28-201ENST00000199706 UPF1Q92900 1129 aaKnown RBP eCLIP24.02■■□□□ 1.443e-25■■■■■ 56.4
MRPL28-201ENST00000199706 ZBTB7CA1YPR0 619 aa24.01■■□□□ 1.43
MRPL28-201ENST00000199706 POLR3GLQ9BT43 218 aa24.01■■□□□ 1.43
MRPL28-201ENST00000199706 GGNBP2Q9H3C7 697 aa24.01■■□□□ 1.43
MRPL28-201ENST00000199706 IP6K1Q92551 441 aa24■■□□□ 1.43
MRPL28-201ENST00000199706 PANK3Q9H999 370 aa24■■□□□ 1.43
MRPL28-201ENST00000199706 CCDC7Q96M83 1385 aa24■■□□□ 1.43
MRPL28-201ENST00000199706 KRT27Q7Z3Y8 459 aa23.99■■□□□ 1.43
MRPL28-201ENST00000199706 CARD10Q9BWT7 1032 aa23.99■■□□□ 1.43
MRPL28-201ENST00000199706 MAP3K19Q56UN5 1328 aa23.99■■□□□ 1.43
MRPL28-201ENST00000199706 CDCA7Q9BWT1 371 aaPredicted RBP23.98■■□□□ 1.43
MRPL28-201ENST00000199706 TOM1L2Q6ZVM7 507 aa23.97■■□□□ 1.43
MRPL28-201ENST00000199706 CCDC125Q86Z20 511 aa23.97■■□□□ 1.43
MRPL28-201ENST00000199706 LRRC37A3O60309 1634 aa23.96■■□□□ 1.43
MRPL28-201ENST00000199706 DISP2A7MBM2 1401 aa23.96■■□□□ 1.43
MRPL28-201ENST00000199706 FLT4P35916 1363 aa23.94■■□□□ 1.42
MRPL28-201ENST00000199706 A0A0G2JS52 829 aa23.94■■□□□ 1.42
MRPL28-201ENST00000199706 HOXC9P31274 260 aa23.94■■□□□ 1.42
MRPL28-201ENST00000199706 MYT1Q01538 1121 aa23.94■■□□□ 1.42
MRPL28-201ENST00000199706 USP35Q9P2H5 1018 aa23.94■■□□□ 1.42
MRPL28-201ENST00000199706 PEAK1Q9H792 1746 aa23.93■■□□□ 1.42
MRPL28-201ENST00000199706 WASHC2AQ641Q2 1341 aa23.93■■□□□ 1.42
MRPL28-201ENST00000199706 CSB-PGBD3P0DP91 1061 aa23.93■■□□□ 1.42
MRPL28-201ENST00000199706 ANKRD24Q8TF21 1146 aa23.92■■□□□ 1.42
MRPL28-201ENST00000199706 INSRP06213 1382 aa23.91■■□□□ 1.42
MRPL28-201ENST00000199706 MAP2P11137 1827 aaKnown RBP23.91■■□□□ 1.42
MRPL28-201ENST00000199706 AMPHP49418 695 aa23.91■■□□□ 1.42
MRPL28-201ENST00000199706 KNSTRNQ9Y448 316 aa23.9■■□□□ 1.42
MRPL28-201ENST00000199706 SMG6Q86US8 1419 aaKnown RBP23.9■■□□□ 1.42
MRPL28-201ENST00000199706 RRS1Q15050 365 aaKnown RBP23.89■■□□□ 1.41
MRPL28-201ENST00000199706 RGPD1P0DJD0 1748 aa23.89■■□□□ 1.41
MRPL28-201ENST00000199706 NPC1L1Q9UHC9 1359 aa23.89■■□□□ 1.41
MRPL28-201ENST00000199706 BCL9O00512 1426 aa23.87■■□□□ 1.41
MRPL28-201ENST00000199706 TNS2Q63HR2 1409 aa23.87■■□□□ 1.41
MRPL28-201ENST00000199706 AMER1Q5JTC6 1135 aaPredicted RBP23.87■■□□□ 1.41
MRPL28-201ENST00000199706 PER1O15534 1290 aaPredicted RBP23.86■■□□□ 1.41
MRPL28-201ENST00000199706 FBLN1P23142 703 aa23.86■■□□□ 1.41
MRPL28-201ENST00000199706 NLRP2Q9NX02 1062 aa23.86■■□□□ 1.41
MRPL28-201ENST00000199706 PDE3BQ13370 1112 aa23.85■■□□□ 1.41
MRPL28-201ENST00000199706 FAM196AQ6ZSG2 479 aa23.85■■□□□ 1.41
MRPL28-201ENST00000199706 OVOS2A0A0G2JMS6 1433 aa23.84■■□□□ 1.41
MRPL28-201ENST00000199706 DDB1Q16531 1140 aa23.84■■□□□ 1.41
MRPL28-201ENST00000199706 RGPD2P0DJD1 1756 aa23.83■■□□□ 1.41
MRPL28-201ENST00000199706 ZEB1P37275 1124 aaPredicted RBP23.83■■□□□ 1.41
MRPL28-201ENST00000199706 TNS1Q9HBL0 1735 aaKnown RBP23.83■■□□□ 1.41
MRPL28-201ENST00000199706 NCAPD2Q15021 1401 aa23.83■■□□□ 1.4
MRPL28-201ENST00000199706 EMILIN1Q9Y6C2 1016 aa23.82■■□□□ 1.4
MRPL28-201ENST00000199706 IL2RBP14784 551 aa23.81■■□□□ 1.4
MRPL28-201ENST00000199706 POLKQ9UBT6 870 aa23.81■■□□□ 1.4
MRPL28-201ENST00000199706 HSP90AB2PQ58FF8 381 aa23.8■■□□□ 1.4
MRPL28-201ENST00000199706 SBF2Q86WG5 1849 aa23.79■■□□□ 1.4
MRPL28-201ENST00000199706 PLEKHG2Q9H7P9 1386 aa23.78■■□□□ 1.4
MRPL28-201ENST00000199706 MORC1Q86VD1 984 aa23.78■■□□□ 1.4
MRPL28-201ENST00000199706 LTV1Q96GA3 475 aaPredicted RBP23.77■■□□□ 1.4
MRPL28-201ENST00000199706 EXOC5O00471 708 aa23.76■■□□□ 1.39
MRPL28-201ENST00000199706 SF3B2Q13435 895 aaKnown RBP23.76■■□□□ 1.39
MRPL28-201ENST00000199706 RGPD3A6NKT7 1758 aaPredicted RBP23.75■■□□□ 1.39
MRPL28-201ENST00000199706 RGPD4Q7Z3J3 1758 aa23.75■■□□□ 1.39
MRPL28-201ENST00000199706 NBPF6Q5VWK0 638 aa23.74■■□□□ 1.39
MRPL28-201ENST00000199706 NBPF4Q96M43 638 aa23.74■■□□□ 1.39
MRPL28-201ENST00000199706 MEGF6O75095 1541 aa23.74■■□□□ 1.39
MRPL28-201ENST00000199706 SHANK3Q9BYB0 1731 aa23.73■■□□□ 1.39
MRPL28-201ENST00000199706 FAM182BQ5T319 152 aa23.73■■□□□ 1.39
MRPL28-201ENST00000199706 MARCH10Q8NA82 808 aaPredicted RBP23.73■■□□□ 1.39
MRPL28-201ENST00000199706 PARD3Q8TEW0 1356 aa23.73■■□□□ 1.39
MRPL28-201ENST00000199706 PPM1GO15355 546 aaPredicted RBP23.71■■□□□ 1.39
MRPL28-201ENST00000199706 TNNT2P45379 298 aaPredicted RBP23.71■■□□□ 1.39
MRPL28-201ENST00000199706 BAG6P46379 1132 aa23.71■■□□□ 1.39
MRPL28-201ENST00000199706 PKD1L3Q7Z443 1732 aa23.7■■□□□ 1.39
MRPL28-201ENST00000199706 NHSQ6T4R5 1651 aa23.7■■□□□ 1.39
MRPL28-201ENST00000199706 RAPGEF4Q8WZA2 1011 aa23.68■■□□□ 1.38
MRPL28-201ENST00000199706 TRIM37O94972 964 aa23.67■■□□□ 1.38
MRPL28-201ENST00000199706 EIF4A2Q14240 407 aaKnown RBP23.67■■□□□ 1.38
MRPL28-201ENST00000199706 IGSF1Q8N6C5 1336 aa23.66■■□□□ 1.38
MRPL28-201ENST00000199706 RREB1Q92766 1687 aa23.65■■□□□ 1.38
MRPL28-201ENST00000199706 CC2D1BQ5T0F9 858 aaKnown RBP23.65■■□□□ 1.38
MRPL28-201ENST00000199706 BCL11BQ9C0K0 894 aaPredicted RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms