RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 TCEAL9Q9UHQ7 104 aa14.35□□□□□ -0.11
TRO-201ENST00000173898 WDR33Q9C0J8 1336 aaKnown RBP14.35□□□□□ -0.11
TRO-201ENST00000173898 CCDC173Q0VFZ6 552 aa14.35□□□□□ -0.11
TRO-201ENST00000173898 PDILTQ8N807 584 aa14.35□□□□□ -0.11
TRO-201ENST00000173898 BRMS1Q9HCU9 246 aa14.35□□□□□ -0.11
TRO-201ENST00000173898 EXOC6BQ9Y2D4 811 aa14.35□□□□□ -0.11
TRO-201ENST00000173898 NUDT16Q96DE0 195 aaKnown RBP14.34□□□□□ -0.11
TRO-201ENST00000173898 CIZ1Q9ULV3 898 aaPredicted RBP14.34□□□□□ -0.11
TRO-201ENST00000173898 ABCC5O15440 1437 aa14.34□□□□□ -0.11
TRO-201ENST00000173898 HMGXB3Q12766 1538 aa14.34□□□□□ -0.11
TRO-201ENST00000173898 MYL6BP14649 208 aa14.34□□□□□ -0.11
TRO-201ENST00000173898 STK38Q15208 465 aa14.34□□□□□ -0.11
TRO-201ENST00000173898 MPNDQ8N594 471 aa14.34□□□□□ -0.11
TRO-201ENST00000173898 GRPEL1Q9HAV7 217 aa14.34□□□□□ -0.11
TRO-201ENST00000173898 STRN4Q9NRL3 753 aa14.34□□□□□ -0.11
TRO-201ENST00000173898 RRP12Q5JTH9 1297 aaKnown RBP14.34□□□□□ -0.11
TRO-201ENST00000173898 MIS18AQ9NYP9 233 aa14.34□□□□□ -0.11
TRO-201ENST00000173898 CCDC158Q5M9N0 1113 aa14.33□□□□□ -0.12
TRO-201ENST00000173898 ARHGEF11O15085 1522 aa14.33□□□□□ -0.12
TRO-201ENST00000173898 DCTN1Q14203 1278 aa14.33□□□□□ -0.12
TRO-201ENST00000173898 LARP1BQ659C4 914 aaKnown RBP14.33□□□□□ -0.12
TRO-201ENST00000173898 WAPLQ7Z5K2 1190 aa14.33□□□□□ -0.12
TRO-201ENST00000173898 AACSQ86V21 672 aa14.33□□□□□ -0.12
TRO-201ENST00000173898 ARGLU1Q9NWB6 273 aaPredicted RBP14.33□□□□□ -0.12
TRO-201ENST00000173898 KIF6Q6ZMV9 814 aa14.32□□□□□ -0.12
TRO-201ENST00000173898 CNNM1Q9NRU3 951 aa14.32□□□□□ -0.12
TRO-201ENST00000173898 CTDP1Q9Y5B0 961 aaPredicted RBP14.32□□□□□ -0.12
TRO-201ENST00000173898 CABP4P57796 275 aa14.32□□□□□ -0.12
TRO-201ENST00000173898 KRT85P78386 507 aa14.32□□□□□ -0.12
TRO-201ENST00000173898 TEX35Q5T0J7 233 aa14.32□□□□□ -0.12
TRO-201ENST00000173898 BLOC1S2Q6QNY1 142 aa14.32□□□□□ -0.12
TRO-201ENST00000173898 CWC27Q6UX04 472 aaKnown RBP14.32□□□□□ -0.12
TRO-201ENST00000173898 SMC2O95347 1197 aa14.32□□□□□ -0.12
TRO-201ENST00000173898 ANKRD1Q15327 319 aa14.32□□□□□ -0.12
TRO-201ENST00000173898 SAMD1Q6SPF0 538 aaPredicted RBP14.32□□□□□ -0.12
TRO-201ENST00000173898 MCM10Q7L590 875 aa14.32□□□□□ -0.12
TRO-201ENST00000173898 SPC24Q8NBT2 197 aa14.32□□□□□ -0.12
TRO-201ENST00000173898 ZNF396Q96N95 335 aaPredicted RBP14.32□□□□□ -0.12
TRO-201ENST00000173898 DDX54Q8TDD1 881 aaKnown RBP14.31□□□□□ -0.12
TRO-201ENST00000173898 NAP1L1P55209 391 aaKnown RBP14.31□□□□□ -0.12
TRO-201ENST00000173898 AEBP1Q8IUX7 1158 aa14.31□□□□□ -0.12
TRO-201ENST00000173898 CCDC192P0DO97 292 aa14.31□□□□□ -0.12
TRO-201ENST00000173898 CCDC141Q6ZP82 1450 aa14.31□□□□□ -0.12
TRO-201ENST00000173898 DUSP27Q5VZP5 1158 aa14.3□□□□□ -0.12
TRO-201ENST00000173898 TTC39AQ5SRH9 613 aa14.3□□□□□ -0.12
TRO-201ENST00000173898 ABCA10Q8WWZ4 1543 aa14.3□□□□□ -0.12
TRO-201ENST00000173898 ME1P48163 572 aa14.3□□□□□ -0.12
TRO-201ENST00000173898 JAKMIP1Q96N16 626 aaKnown RBP14.3□□□□□ -0.12
TRO-201ENST00000173898 DNMBPQ6XZF7 1577 aa14.3□□□□□ -0.12
TRO-201ENST00000173898 BTBD11A6QL63 1104 aa14.3□□□□□ -0.12
TRO-201ENST00000173898 ADGRF5Q8IZF2 1346 aa14.3□□□□□ -0.12
TRO-201ENST00000173898 PCF11O94913 1555 aaKnown RBP14.29□□□□□ -0.12
TRO-201ENST00000173898 NCOA1Q15788 1441 aa14.29□□□□□ -0.12
TRO-201ENST00000173898 TOM1L2Q6ZVM7 507 aa14.29□□□□□ -0.12
TRO-201ENST00000173898 MAGI1Q96QZ7 1491 aaPredicted RBP14.29□□□□□ -0.12
TRO-201ENST00000173898 TNMDQ9H2S6 317 aa14.29□□□□□ -0.12
TRO-201ENST00000173898 PLB1Q6P1J6 1458 aa14.29□□□□□ -0.12
TRO-201ENST00000173898 CCDC43Q96MW1 224 aaKnown RBP14.29□□□□□ -0.12
TRO-201ENST00000173898 UPF3BQ9BZI7 483 aaKnown RBP14.29□□□□□ -0.12
TRO-201ENST00000173898 OFD1O75665 1012 aa14.28□□□□□ -0.12
TRO-201ENST00000173898 NUTM1Q86Y26 1132 aa14.28□□□□□ -0.12
TRO-201ENST00000173898 JMYQ8N9B5 988 aa14.28□□□□□ -0.12
TRO-201ENST00000173898 SPG7Q9UQ90 795 aa14.28□□□□□ -0.12
TRO-201ENST00000173898 HMGN5P82970 282 aaKnown RBP14.28□□□□□ -0.12
TRO-201ENST00000173898 FKBP4Q02790 459 aaKnown RBP eCLIP14.28□□□□□ -0.12
TRO-201ENST00000173898 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.28□□□□□ -0.12
TRO-201ENST00000173898 PDRG1Q9NUG6 133 aa14.28□□□□□ -0.12
TRO-201ENST00000173898 GNAT3A8MTJ3 354 aa14.28□□□□□ -0.12
TRO-201ENST00000173898 CCDC57Q2TAC2 916 aa14.28□□□□□ -0.12
TRO-201ENST00000173898 TTLL5Q6EMB2 1281 aa14.28□□□□□ -0.12
TRO-201ENST00000173898 XPCQ01831 940 aaPredicted RBP14.27□□□□□ -0.12
TRO-201ENST00000173898 ALDH1L2Q3SY69 923 aa14.27□□□□□ -0.12
TRO-201ENST00000173898 NME9Q86XW9 330 aa14.27□□□□□ -0.12
TRO-201ENST00000173898 MAP7D2Q96T17 732 aa14.27□□□□□ -0.12
TRO-201ENST00000173898 CEP126Q9P2H0 1117 aa14.27□□□□□ -0.12
TRO-201ENST00000173898 CAMSAP2Q08AD1 1489 aa14.27□□□□□ -0.13
TRO-201ENST00000173898 SMARCA5O60264 1052 aaPredicted RBP14.27□□□□□ -0.13
TRO-201ENST00000173898 MTERF4Q7Z6M4 381 aaKnown RBP14.27□□□□□ -0.13
TRO-201ENST00000173898 EMILIN1Q9Y6C2 1016 aa14.27□□□□□ -0.13
TRO-201ENST00000173898 HSP90B2PQ58FF3 399 aa14.27□□□□□ -0.13
TRO-201ENST00000173898 NKTRP30414 1462 aaKnown RBP14.26□□□□□ -0.13
TRO-201ENST00000173898 ESPNB1AK53 854 aa14.26□□□□□ -0.13
TRO-201ENST00000173898 ZC3H6P61129 1189 aaKnown RBP14.26□□□□□ -0.13
TRO-201ENST00000173898 PRM3Q9NNZ6 103 aa14.26□□□□□ -0.13
TRO-201ENST00000173898 PRDM11Q9NQV5 511 aa14.26□□□□□ -0.13
TRO-201ENST00000173898 CC2D2AQ9P2K1 1620 aa14.26□□□□□ -0.13
TRO-201ENST00000173898 BRPF1P55201 1214 aaPredicted RBP14.26□□□□□ -0.13
TRO-201ENST00000173898 ANKLE2Q86XL3 938 aa14.26□□□□□ -0.13
TRO-201ENST00000173898 ABCC11Q96J66 1382 aa14.26□□□□□ -0.13
TRO-201ENST00000173898 TRIM27P14373 513 aa14.26□□□□□ -0.13
TRO-201ENST00000173898 STK11IPQ8N1F8 1099 aa14.26□□□□□ -0.13
TRO-201ENST00000173898 ZSCAN31Q96LW9 406 aaPredicted RBP14.26□□□□□ -0.13
TRO-201ENST00000173898 MX1P20591 662 aa14.25□□□□□ -0.13
TRO-201ENST00000173898 MEX3CQ5U5Q3 659 aaKnown RBP14.25□□□□□ -0.13
TRO-201ENST00000173898 KIF1BPQ96EK5 621 aa14.25□□□□□ -0.13
TRO-201ENST00000173898 TRIM22Q8IYM9 498 aa14.25□□□□□ -0.13
TRO-201ENST00000173898 LRPPRCP42704 1394 aaKnown RBP14.25□□□□□ -0.13
TRO-201ENST00000173898 RPRD2Q5VT52 1461 aaKnown RBP14.25□□□□□ -0.13
TRO-201ENST00000173898 FILIP1LQ4L180 1135 aa14.25□□□□□ -0.13
TRO-201ENST00000173898 SPATA32Q96LK8 384 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms