RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 Abcc1O35379 1528 aa16.3■□□□□ 0.2
Vps35-201ENSMUST00000034131 Gm973E9Q295 1059 aa16.3■□□□□ 0.2
Vps35-201ENSMUST00000034131 Plekhm2Q80TQ5 1018 aa16.3■□□□□ 0.2
Vps35-201ENSMUST00000034131 Cfap74Q3UY96 1578 aa16.3■□□□□ 0.2
Vps35-201ENSMUST00000034131 Ankrd50F7BE84 1390 aa16.3■□□□□ 0.2
Vps35-201ENSMUST00000034131 Fam184aE9PW83 1143 aa16.3■□□□□ 0.2
Vps35-201ENSMUST00000034131 Stag3O70576 1240 aa16.3■□□□□ 0.2
Vps35-201ENSMUST00000034131 Inpp5bQ8K337 993 aa16.3■□□□□ 0.2
Vps35-201ENSMUST00000034131 Ppp6r3Q922D4 844 aa16.3■□□□□ 0.2
Vps35-201ENSMUST00000034131 U2af2P26369 475 aaKnown RBP16.29■□□□□ 0.2
Vps35-201ENSMUST00000034131 Adcy5P84309 1262 aa16.29■□□□□ 0.2
Vps35-201ENSMUST00000034131 Trim27Q62158 513 aa16.29■□□□□ 0.2
Vps35-201ENSMUST00000034131 Itsn2Q9Z0R6 1659 aa16.29■□□□□ 0.2
Vps35-201ENSMUST00000034131 Abcc2Q8VI47 1543 aa16.29■□□□□ 0.2
Vps35-201ENSMUST00000034131 Atp2b2Q9R0K7 1198 aa16.29■□□□□ 0.2
Vps35-201ENSMUST00000034131 Ttc21aQ8C0S4 1314 aa16.29■□□□□ 0.2
Vps35-201ENSMUST00000034131 Nucb1Q02819 459 aaKnown RBP16.29■□□□□ 0.2
Vps35-201ENSMUST00000034131 Ankrd44B2RXR6 993 aa16.28■□□□□ 0.2
Vps35-201ENSMUST00000034131 Pcmtd1P59913 357 aa16.28■□□□□ 0.2
Vps35-201ENSMUST00000034131 NexnQ7TPW1 607 aa16.28■□□□□ 0.2
Vps35-201ENSMUST00000034131 Arhgap5P97393 1501 aa16.28■□□□□ 0.2
Vps35-201ENSMUST00000034131 Mroh2aD3Z750 1679 aa16.28■□□□□ 0.2
Vps35-201ENSMUST00000034131 St18Q80TY4 1045 aa16.28■□□□□ 0.2
Vps35-201ENSMUST00000034131 Chmp4cQ9D7F7 232 aa16.28■□□□□ 0.2
Vps35-201ENSMUST00000034131 Pdia3P27773 505 aaKnown RBP16.28■□□□□ 0.2
Vps35-201ENSMUST00000034131 Gcc1Q9D4H2 778 aa16.28■□□□□ 0.2
Vps35-201ENSMUST00000034131 Prdm16A2A935 1275 aa16.27■□□□□ 0.2
Vps35-201ENSMUST00000034131 Ecm2Q5FW85 670 aa16.27■□□□□ 0.2
Vps35-201ENSMUST00000034131 Senp3Q9EP97 568 aaKnown RBP16.27■□□□□ 0.19
Vps35-201ENSMUST00000034131 Nphp4P59240 1425 aa16.27■□□□□ 0.19
Vps35-201ENSMUST00000034131 Dync1i1O88485 628 aa16.27■□□□□ 0.19
Vps35-201ENSMUST00000034131 Filip1lQ6P6L0 1131 aa16.27■□□□□ 0.19
Vps35-201ENSMUST00000034131 Mast1Q9R1L5 1570 aa16.26■□□□□ 0.19
Vps35-201ENSMUST00000034131 Gm45015A0A140LII9 184 aa16.26■□□□□ 0.19
Vps35-201ENSMUST00000034131 Gm18336A0A140LIU8 765 aa16.26■□□□□ 0.19
Vps35-201ENSMUST00000034131 Utp3Q9JI13 469 aaKnown RBP16.26■□□□□ 0.19
Vps35-201ENSMUST00000034131 Mcm2P97310 904 aa16.26■□□□□ 0.19
Vps35-201ENSMUST00000034131 Elp1Q7TT37 1333 aaKnown RBP16.25■□□□□ 0.19
Vps35-201ENSMUST00000034131 Aldh8a1Q8BH00 487 aa16.25■□□□□ 0.19
Vps35-201ENSMUST00000034131 Dnmt1P13864 1620 aaKnown RBP16.25■□□□□ 0.19
Vps35-201ENSMUST00000034131 Cpa2Q504N0 417 aa16.25■□□□□ 0.19
Vps35-201ENSMUST00000034131 Fam208aQ69ZR9 1610 aaKnown RBP16.25■□□□□ 0.19
Vps35-201ENSMUST00000034131 AI481877A2ALV5 1481 aa16.25■□□□□ 0.19
Vps35-201ENSMUST00000034131 Puf60Q3UEB3 564 aaKnown RBP16.25■□□□□ 0.19
Vps35-201ENSMUST00000034131 Q4VA45 678 aa16.25■□□□□ 0.19
Vps35-201ENSMUST00000034131 Naip7Q9JIB3 1402 aa16.24■□□□□ 0.19
Vps35-201ENSMUST00000034131 FanclQ9CR14 375 aa16.24■□□□□ 0.19
Vps35-201ENSMUST00000034131 Q9D2X8 372 aa16.24■□□□□ 0.19
Vps35-201ENSMUST00000034131 Ythdc2B2RR83 1445 aaKnown RBP16.24■□□□□ 0.19
Vps35-201ENSMUST00000034131 Atp6v1dP57746 247 aa16.24■□□□□ 0.19
Vps35-201ENSMUST00000034131 Swt1Q9DBQ9 907 aa16.24■□□□□ 0.19
Vps35-201ENSMUST00000034131 Map3k5O35099 1380 aa16.24■□□□□ 0.19
Vps35-201ENSMUST00000034131 Nucb2P81117 420 aa16.23■□□□□ 0.19
Vps35-201ENSMUST00000034131 Nxf2Q4ZGD8 691 aa16.23■□□□□ 0.19
Vps35-201ENSMUST00000034131 Mx2Q9WVP9 655 aa16.23■□□□□ 0.19
Vps35-201ENSMUST00000034131 Kcnj4P52189 445 aa16.23■□□□□ 0.19
Vps35-201ENSMUST00000034131 Plcd3Q8K2J0 785 aa16.23■□□□□ 0.19
Vps35-201ENSMUST00000034131 Gtpbp4Q99ME9 634 aaKnown RBP16.23■□□□□ 0.19
Vps35-201ENSMUST00000034131 Phactr2B1AVP0 632 aa16.22■□□□□ 0.19
Vps35-201ENSMUST00000034131 Tpd52l1O54818 204 aa16.22■□□□□ 0.19
Vps35-201ENSMUST00000034131 Gm156Q58A37 223 aa16.22■□□□□ 0.19
Vps35-201ENSMUST00000034131 Ercc6lQ8BHK9 1240 aa16.22■□□□□ 0.19
Vps35-201ENSMUST00000034131 Adgrl3Q80TS3 1537 aa16.22■□□□□ 0.19
Vps35-201ENSMUST00000034131 Erc2Q6PH08 957 aa16.22■□□□□ 0.19
Vps35-201ENSMUST00000034131 Jph4Q80WT0 628 aa16.22■□□□□ 0.19
Vps35-201ENSMUST00000034131 Mrps27Q8BK72 415 aaKnown RBP16.22■□□□□ 0.19
Vps35-201ENSMUST00000034131 Triml2E9PW10 424 aa16.22■□□□□ 0.19
Vps35-201ENSMUST00000034131 Nol12Q8BG17 217 aa16.22■□□□□ 0.19
Vps35-201ENSMUST00000034131 RdxP26043 583 aaKnown RBP16.21■□□□□ 0.19
Vps35-201ENSMUST00000034131 ErbinQ80TH2 1402 aa16.21■□□□□ 0.19
Vps35-201ENSMUST00000034131 Exosc9Q9JHI7 438 aaKnown RBP16.21■□□□□ 0.19
Vps35-201ENSMUST00000034131 Zkscan16A2ALW2 728 aa16.21■□□□□ 0.18
Vps35-201ENSMUST00000034131 Sh3bp1P55194 680 aa16.2■□□□□ 0.18
Vps35-201ENSMUST00000034131 Nsd3Q6P2L6 1439 aa16.2■□□□□ 0.18
Vps35-201ENSMUST00000034131 Bms1Q6PGF5 1284 aaKnown RBP16.2■□□□□ 0.18
Vps35-201ENSMUST00000034131 AatkQ80YE4 1365 aa16.2■□□□□ 0.18
Vps35-201ENSMUST00000034131 SrrtQ99MR6 875 aaKnown RBP16.2■□□□□ 0.18
Vps35-201ENSMUST00000034131 Hfm1D3Z4R1 1434 aa16.19■□□□□ 0.18
Vps35-201ENSMUST00000034131 Cdkn1cP49919 348 aa16.19■□□□□ 0.18
Vps35-201ENSMUST00000034131 Mmel1Q9JLI3 765 aa16.19■□□□□ 0.18
Vps35-201ENSMUST00000034131 Vwa3bJ9JI28 736 aa16.19■□□□□ 0.18
Vps35-201ENSMUST00000034131 Taf3Q5HZG4 932 aa16.19■□□□□ 0.18
Vps35-201ENSMUST00000034131 Smarca5Q91ZW3 1051 aaKnown RBP16.19■□□□□ 0.18
Vps35-201ENSMUST00000034131 Pik3r4Q8VD65 1358 aa16.19■□□□□ 0.18
Vps35-201ENSMUST00000034131 MccE9PWI3 1003 aa16.18■□□□□ 0.18
Vps35-201ENSMUST00000034131 Vamp4O70480 141 aa16.18■□□□□ 0.18
Vps35-201ENSMUST00000034131 IqubQ8CDK3 788 aa16.18■□□□□ 0.18
Vps35-201ENSMUST00000034131 PaskQ8CEE6 1383 aa16.18■□□□□ 0.18
Vps35-201ENSMUST00000034131 Rtf1A2AQ19 715 aaKnown RBP16.18■□□□□ 0.18
Vps35-201ENSMUST00000034131 Tshz2Q68FE9 1030 aa16.18■□□□□ 0.18
Vps35-201ENSMUST00000034131 Myom1Q62234 1667 aaKnown RBP16.18■□□□□ 0.18
Vps35-201ENSMUST00000034131 Fancd2Q80V62 1450 aa16.18■□□□□ 0.18
Vps35-201ENSMUST00000034131 Nol11Q8BJW5 723 aaKnown RBP16.18■□□□□ 0.18
Vps35-201ENSMUST00000034131 Cdc37l1Q9CZP7 335 aa16.18■□□□□ 0.18
Vps35-201ENSMUST00000034131 Zcchc11B2RX14 1644 aaKnown RBP16.18■□□□□ 0.18
Vps35-201ENSMUST00000034131 Igf1rQ60751 1373 aa16.17■□□□□ 0.18
Vps35-201ENSMUST00000034131 Cspp1B2RX88 1205 aa16.17■□□□□ 0.18
Vps35-201ENSMUST00000034131 Tpm3P21107 285 aaKnown RBP16.17■□□□□ 0.18
Vps35-201ENSMUST00000034131 Chd1P40201 1711 aa16.17■□□□□ 0.18
Vps35-201ENSMUST00000034131 Samm50Q8BGH2 469 aa16.17■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms