RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 MAGEA2P43356 314 aa16.44■□□□□ 0.22
CACNA1A-258ENST00000638029 GCNT7Q6ZNI0 430 aa16.44■□□□□ 0.22
CACNA1A-258ENST00000638029 STOX1Q6ZVD7 989 aa16.44■□□□□ 0.22
CACNA1A-258ENST00000638029 GHDCQ8N2G8 530 aa16.44■□□□□ 0.22
CACNA1A-258ENST00000638029 TELO2Q9Y4R8 837 aa16.44■□□□□ 0.22
CACNA1A-258ENST00000638029 BCORL1Q5H9F3 1711 aa16.44■□□□□ 0.22
CACNA1A-258ENST00000638029 CBX3Q13185 183 aa16.44■□□□□ 0.22
CACNA1A-258ENST00000638029 C1orf189Q5VU69 101 aa16.44■□□□□ 0.22
CACNA1A-258ENST00000638029 IRGCQ6NXR0 463 aa16.44■□□□□ 0.22
CACNA1A-258ENST00000638029 METTL7BQ6UX53 244 aa16.44■□□□□ 0.22
CACNA1A-258ENST00000638029 ZNF227Q86WZ6 799 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 POC5Q8NA72 575 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 PSMA8Q8TAA3 256 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 SCGB1D2O95969 90 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 CCDC80Q76M96 950 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 CROCCP3Q8IVE0 287 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 ANKS1AQ92625 1134 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 NUP50Q9UKX7 468 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 XKRYO14609 159 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 RNASEH2AO75792 299 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 IL33O95760 270 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 GYPCP04921 128 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 PAGE2BQ5JRK9 111 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 ZCCHC23Q6ZST2 131 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 BEND4Q6ZU67 534 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 DHRS7Q9Y394 339 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 PCDHGA6Q9Y5G7 932 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 CNTNAP5Q8WYK1 1306 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 KRT36O76013 467 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 RB1P06400 928 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 RBP1P09455 135 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 SERPINA4P29622 427 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 ASMTP46597 345 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 BNIP2Q12982 314 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 TMEM176AQ96HP8 235 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 NAT9Q9BTE0 207 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 LMAN2LQ9H0V9 348 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 NCKIPSDQ9NZQ3 722 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 IKZF2Q9UKS7 526 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 IKZF3Q9UKT9 509 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 MYO3AQ8NEV4 1616 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 ZSCAN5BA6NJL1 495 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 TRIM38O00635 465 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 FBXO21O94952 628 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 RPLP2P05387 115 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 PKNOX1P55347 436 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 LAMTOR4Q0VGL1 99 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 ITIH4Q14624 930 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 TREML1Q86YW5 311 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 CCNJLQ8IV13 435 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 SYNPOQ8N3V7 929 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 HIST1H2AAQ96QV6 131 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 RUSC1Q9BVN2 902 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 ZNF224Q9NZL3 707 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 ABCC3O15438 1527 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 ADM5C9JUS6 153 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 ANPEPP15144 967 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 MPP3Q13368 585 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 SLC41A1Q8IVJ1 513 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 MAGEB18Q96M61 343 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 CST11Q9H112 138 aa16.43■□□□□ 0.22
CACNA1A-258ENST00000638029 NT5EP21589 574 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 MGAT1P26572 445 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 IL12BP29460 328 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 UGT1A5P35504 534 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 ABCG1P45844 678 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 SNRPD1P62314 119 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 XKR6Q5GH73 641 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 VANGL1Q8TAA9 524 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 ASB8Q9H765 288 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 ABCB9Q9NP78 766 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 QSOX1O00391 747 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 SNX20Q7Z614 316 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 CPT1CQ8TCG5 803 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 HCAR2Q8TDS4 363 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 SYN2Q92777 582 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 ELAC1Q9H777 363 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 ZNF226Q9NYT6 803 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 ALDH4A1P30038 563 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 MED22Q15528 200 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 JAZF1Q86VZ6 243 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 SMARCD1Q96GM5 515 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 PLA2G12BQ9BX93 195 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 CACNB4O00305 520 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 DDX3XO00571 662 aaKnown RBP eCLIP16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 AXIN1O15169 862 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 IL18R1Q13478 541 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 Q4G0T1 1027 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 ARSHQ5FYA8 562 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 SPOCD1Q6ZMY3 1216 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 ZNF276Q8N554 614 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 UBR7Q8N806 425 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 ZSCAN1Q8NBB4 408 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 SLC38A3Q99624 504 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 UBA2Q9UBT2 640 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 CYB5AP00167 134 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 CYP11B1P15538 503 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 S100A3P33764 101 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 SLC26A3P40879 764 aa16.42■□□□□ 0.22
CACNA1A-258ENST00000638029 ECH1Q13011 328 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms