RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 SPATA21Q7Z572 469 aa18.39■□□□□ 0.53
SNAPC3-207ENST00000610884 PTAR1Q7Z6K3 402 aaPredicted RBP18.39■□□□□ 0.53
SNAPC3-207ENST00000610884 LINC00523Q86TU6 105 aa18.39■□□□□ 0.53
SNAPC3-207ENST00000610884 LRRC49Q8IUZ0 686 aa18.39■□□□□ 0.53
SNAPC3-207ENST00000610884 AGAP11Q8TF27 550 aa18.39■□□□□ 0.53
SNAPC3-207ENST00000610884 SORCS1Q8WY21 1168 aa18.39■□□□□ 0.53
SNAPC3-207ENST00000610884 TTC17Q96AE7 1141 aa18.39■□□□□ 0.53
SNAPC3-207ENST00000610884 FAM136AQ96C01 138 aa18.39■□□□□ 0.53
SNAPC3-207ENST00000610884 MOCOSQ96EN8 888 aa18.39■□□□□ 0.53
SNAPC3-207ENST00000610884 ABCB8Q9NUT2 735 aa18.39■□□□□ 0.53
SNAPC3-207ENST00000610884 TDP1Q9NUW8 608 aa18.39■□□□□ 0.53
SNAPC3-207ENST00000610884 LSM7Q9UK45 103 aaKnown RBP18.39■□□□□ 0.53
SNAPC3-207ENST00000610884 ANTXRLA6NF34 631 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 A8MUI8 341 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 USP1O94782 785 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 ATXN1LP0C7T5 689 aaKnown RBP18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 SLC7A9P82251 487 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 LMAN2Q12907 356 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 PTPRN2Q92932 1015 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 RMDN1Q96DB5 314 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 IFT43Q96FT9 208 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 ACE2Q9BYF1 805 aaPredicted RBP18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 ZNF395Q9H8N7 513 aaPredicted RBP18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 CHD5Q8TDI0 1954 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 C5orf67F2Z3F1 127 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 KRT37O76014 449 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 ASMTLO95671 621 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 ITGA2BP08514 1039 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 TSHRP16473 764 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 MPP3Q13368 585 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 MSLNQ13421 630 aaPredicted RBP18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 RIPK1Q13546 671 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 GALNTL6Q49A17 601 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 PCID2Q5JVF3 399 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 FSTL4Q6MZW2 842 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 HTR3DQ70Z44 454 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 OR13C4Q8NGS5 318 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 TTC8Q8TAM2 541 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 CKAP2Q8WWK9 683 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 KLHL29Q96CT2 875 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 ALG14Q96F25 216 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 TXNDC16Q9P2K2 825 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 STOML2Q9UJZ1 356 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 STK38LQ9Y2H1 464 aa18.38■□□□□ 0.53
SNAPC3-207ENST00000610884 FAM237BA0A1B0GVD1 139 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 GPR39O43194 453 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 ZMPSTE24O75844 475 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 HLA-FP30511 346 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 SERPINH1P50454 418 aaKnown RBP18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 SPANXN3Q5MJ09 141 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 SETD3Q86TU7 594 aaPredicted RBP18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 RMDN2Q96LZ7 410 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 SRPK1Q96SB4 655 aaKnown RBP18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 KIFC1Q9BW19 673 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 DONSONQ9NYP3 566 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 TRIM33Q9UPN9 1127 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 ARL2BPQ9Y2Y0 163 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 SPO11Q9Y5K1 396 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 OR51B4Q9Y5P0 310 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 LINC01565O15544 149 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 AHSGP02765 367 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 KRT16P08779 473 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 IRF9Q00978 393 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 CDK18Q07002 472 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 MESP2Q0VG99 397 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 PPP2R2DQ66LE6 453 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 FITM2Q8N6M3 262 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 HJURPQ8NCD3 748 aaPredicted RBP18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 OR6P1Q8NGX9 317 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 RSPRY1Q96DX4 576 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 BPIFA1Q9NP55 256 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 MRPS23Q9Y3D9 190 aaKnown RBP18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 TCAF1Q9Y4C2 921 aa18.37■□□□□ 0.53
SNAPC3-207ENST00000610884 SERPINF2P08697 491 aa18.36■□□□□ 0.53
SNAPC3-207ENST00000610884 ABL2P42684 1182 aa18.36■□□□□ 0.53
SNAPC3-207ENST00000610884 BNIP1Q12981 228 aa18.36■□□□□ 0.53
SNAPC3-207ENST00000610884 HHATQ5VTY9 493 aa18.36■□□□□ 0.53
SNAPC3-207ENST00000610884 CAMK1DQ8IU85 385 aa18.36■□□□□ 0.53
SNAPC3-207ENST00000610884 DCLK2Q8N568 766 aa18.36■□□□□ 0.53
SNAPC3-207ENST00000610884 ARMC2Q8NEN0 867 aa18.36■□□□□ 0.53
SNAPC3-207ENST00000610884 PPHLN1Q8NEY8 458 aaKnown RBP18.36■□□□□ 0.53
SNAPC3-207ENST00000610884 LPCAT1Q8NF37 534 aa18.36■□□□□ 0.53
SNAPC3-207ENST00000610884 SMG7Q92540 1137 aaKnown RBP18.36■□□□□ 0.53
SNAPC3-207ENST00000610884 CDKL2Q92772 493 aa18.36■□□□□ 0.53
SNAPC3-207ENST00000610884 PSKH2Q96QS6 385 aa18.36■□□□□ 0.53
SNAPC3-207ENST00000610884 VPS11Q9H270 941 aa18.36■□□□□ 0.53
SNAPC3-207ENST00000610884 MTG2Q9H4K7 406 aa18.36■□□□□ 0.53
SNAPC3-207ENST00000610884 EBF2Q9HAK2 575 aa18.36■□□□□ 0.53
SNAPC3-207ENST00000610884 SCUBE2Q9NQ36 999 aa18.36■□□□□ 0.53
SNAPC3-207ENST00000610884 FETUBQ9UGM5 382 aa18.36■□□□□ 0.53
SNAPC3-207ENST00000610884 GFRA2O00451 464 aa18.35■□□□□ 0.53
SNAPC3-207ENST00000610884 PIGNO95427 931 aa18.35■□□□□ 0.53
SNAPC3-207ENST00000610884 ANP32DO95626 131 aa18.35■□□□□ 0.53
SNAPC3-207ENST00000610884 PRLP01236 227 aa18.35■□□□□ 0.53
SNAPC3-207ENST00000610884 CTPS1P17812 591 aa18.35■□□□□ 0.53
SNAPC3-207ENST00000610884 ARCN1P48444 511 aaKnown RBP18.35■□□□□ 0.53
SNAPC3-207ENST00000610884 PDE1CQ14123 709 aaPredicted RBP18.35■□□□□ 0.53
SNAPC3-207ENST00000610884 SEPT7Q16181 437 aaKnown RBP18.35■□□□□ 0.53
SNAPC3-207ENST00000610884 LRRC73Q5JTD7 316 aa18.35■□□□□ 0.53
SNAPC3-207ENST00000610884 LY6G5CQ5SRR4 150 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms