RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 FZD2Q14332 565 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 LBRQ14739 615 aaKnown RBP10.62□□□□□ -0.71
CCDC9-203ENST00000596938 AGERQ15109 404 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 ARHGAP36Q6ZRI8 547 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 CAMK1DQ8IU85 385 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 TP53INP2Q8IXH6 220 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 ZNF564Q8TBZ8 553 aaPredicted RBP10.62□□□□□ -0.71
CCDC9-203ENST00000596938 CXorf40AQ8TE69 158 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 CTNNBL1Q8WYA6 563 aaPredicted RBP10.62□□□□□ -0.71
CCDC9-203ENST00000596938 SPOCK2Q92563 424 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 ECHDC3Q96DC8 303 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 CINPQ9BW66 212 aaPredicted RBP10.62□□□□□ -0.71
CCDC9-203ENST00000596938 SP110Q9HB58 689 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 CTTNBP2NLQ9P2B4 639 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 DMXL2Q8TDJ6 3036 aa10.62□□□□□ -0.71
CCDC9-203ENST00000596938 KMT2BQ9UMN6 2715 aaPredicted RBP10.62□□□□□ -0.71
CCDC9-203ENST00000596938 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.61□□□□□ -0.71
CCDC9-203ENST00000596938 A0A1W2PQ67 120 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 NEMP2A6NFY4 417 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 TRIM38O00635 465 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 SCAMP1O15126 338 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 MUSKO15146 869 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 SDC3O75056 442 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 PIAS2O75928 621 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 TMEM253P0C7T8 217 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 NME1P15531 152 aaKnown RBP10.61□□□□□ -0.71
CCDC9-203ENST00000596938 ACP1P24666 158 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 SERPINB6P35237 376 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 HSPA9P38646 679 aaKnown RBP10.61□□□□□ -0.71
CCDC9-203ENST00000596938 SCNN1BP51168 640 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 CDH6P55285 790 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 AP1S1P61966 158 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 SLC10A7Q0GE19 358 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 PTK2BQ14289 1009 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 PDK2Q15119 407 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 PROX2Q3B8N5 592 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 CFAP58Q5T655 872 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 ERAP2Q6P179 960 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 PTAR1Q7Z6K3 402 aaPredicted RBP10.61□□□□□ -0.71
CCDC9-203ENST00000596938 PARGQ86W56 976 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 TMPRSS12Q86WS5 348 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 RNF214Q8ND24 703 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 OR4C6Q8NH72 309 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 CCDC42Q96M95 316 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 CHP1Q99653 195 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 DEF6Q9H4E7 631 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 PCDH12Q9NPG4 1184 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 ABHD10Q9NUJ1 306 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 UCKL1Q9NWZ5 548 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 CSNK1G3Q9Y6M4 447 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 CABIN1Q9Y6J0 2220 aa10.61□□□□□ -0.71
CCDC9-203ENST00000596938 CHD5Q8TDI0 1954 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 TMEM110-MUSTN1A8MSY1 372 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 TRAFD1O14545 582 aaPredicted RBP10.6□□□□□ -0.71
CCDC9-203ENST00000596938 SIGLEC6O43699 453 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 AKR1B10O60218 316 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 MFAP3LO75121 409 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 RFPL3O75679 317 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 KRT7P08729 469 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 GIMD1P0DJR0 217 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 CR2P20023 1033 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 MAN1A1P33908 653 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 MMP12P39900 470 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 SSR1P43307 286 aaKnown RBP10.6□□□□□ -0.71
CCDC9-203ENST00000596938 ACADVLP49748 655 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 LIG3P49916 1009 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 PEX5P50542 639 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 TBX2Q13207 712 aaPredicted RBP10.6□□□□□ -0.71
CCDC9-203ENST00000596938 DNAJC3Q13217 504 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 PDE1CQ14123 709 aaPredicted RBP10.6□□□□□ -0.71
CCDC9-203ENST00000596938 KRT81Q14533 505 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 LRRC14Q15048 493 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 PAFAH1B3Q15102 231 aaKnown RBP10.6□□□□□ -0.71
CCDC9-203ENST00000596938 ATP13A4Q4VNC1 1196 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 HS1BP3Q53T59 392 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 ZNF542PQ5EBM4 170 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 RALGPS1Q5JS13 557 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 LRRC73Q5JTD7 316 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 MARC1Q5VT66 337 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 SARM1Q6SZW1 724 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 DHRS13Q6UX07 377 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 ZSWIM9Q86XI8 627 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 MAP7D3Q8IWC1 876 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 CACTIN-AS1Q8N1I8 211 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 FAM181AQ8N9Y4 354 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 TP53I13Q8NBR0 393 aaPredicted RBP10.6□□□□□ -0.71
CCDC9-203ENST00000596938 KCTD6Q8NC69 237 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 NSMCE1Q8WV22 266 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 BTN2A2Q8WVV5 523 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 FATE1Q969F0 183 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 NSMCE3Q96MG7 304 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 NUDCD1Q96RS6 583 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 WRAP53Q9BUR4 548 aaKnown RBP10.6□□□□□ -0.71
CCDC9-203ENST00000596938 DUSP23Q9BVJ7 150 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 PACSIN1Q9BY11 444 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 NHEJ1Q9H9Q4 299 aaPredicted RBP10.6□□□□□ -0.71
CCDC9-203ENST00000596938 MBNL1Q9NR56 388 aaKnown RBP10.6□□□□□ -0.71
CCDC9-203ENST00000596938 DNAJC28Q9NX36 388 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 NLGN3Q9NZ94 848 aa10.6□□□□□ -0.71
CCDC9-203ENST00000596938 KLF15Q9UIH9 416 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms