RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 MID1O15344 667 aa17.22■□□□□ 0.35
RPRD1A-209ENST00000590898 ERLIN1O75477 346 aa17.22■□□□□ 0.35
RPRD1A-209ENST00000590898 GJB3O75712 270 aa17.22■□□□□ 0.35
RPRD1A-209ENST00000590898 IGLV3-19P01714 112 aa17.22■□□□□ 0.35
RPRD1A-209ENST00000590898 TUBBP07437 444 aa17.22■□□□□ 0.35
RPRD1A-209ENST00000590898 PTGIRP43119 386 aa17.22■□□□□ 0.35
RPRD1A-209ENST00000590898 PSMD8P48556 350 aa17.22■□□□□ 0.35
RPRD1A-209ENST00000590898 POLR2LP62875 67 aaKnown RBP17.22■□□□□ 0.35
RPRD1A-209ENST00000590898 MPP3Q13368 585 aa17.22■□□□□ 0.35
RPRD1A-209ENST00000590898 IHHQ14623 411 aa17.22■□□□□ 0.35
RPRD1A-209ENST00000590898 ZNF528Q3MIS6 628 aa17.22■□□□□ 0.35
RPRD1A-209ENST00000590898 FAM131CQ96AQ9 280 aa17.22■□□□□ 0.35
RPRD1A-209ENST00000590898 KLHL32Q96NJ5 620 aa17.22■□□□□ 0.35
RPRD1A-209ENST00000590898 RBM15Q96T37 977 aaKnown RBP eCLIP17.22■□□□□ 0.353e-7■□□□□ 9.8
RPRD1A-209ENST00000590898 LRFN3Q9BTN0 628 aa17.22■□□□□ 0.35
RPRD1A-209ENST00000590898 FUT8Q9BYC5 575 aa17.22■□□□□ 0.35
RPRD1A-209ENST00000590898 TRIM31Q9BZY9 425 aa17.22■□□□□ 0.35
RPRD1A-209ENST00000590898 PCDH9Q9HC56 1237 aa17.22■□□□□ 0.35
RPRD1A-209ENST00000590898 USP36Q9P275 1121 aaKnown RBP17.22■□□□□ 0.35
RPRD1A-209ENST00000590898 NFU1Q9UMS0 254 aa17.22■□□□□ 0.35
RPRD1A-209ENST00000590898 NEU2Q9Y3R4 380 aa17.22■□□□□ 0.35
RPRD1A-209ENST00000590898 PCDHGC4Q9Y5F7 938 aa17.22■□□□□ 0.35
RPRD1A-209ENST00000590898 RAI2Q9Y5P3 530 aa17.22■□□□□ 0.35
RPRD1A-209ENST00000590898 TSPAN11A1L157 253 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 GOLGA6CA6NDK9 693 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 GOLGA6BA6NDN3 693 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 BHMG1C9JSJ3 638 aaPredicted RBP17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 PIGNO95427 931 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 ECEL1O95672 775 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 EPOP01588 193 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 GOLGA6DP0CG33 693 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 FDFT1P37268 417 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 SUOXP51687 545 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 FAM182AQ5T1J6 154 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 KIAA1324Q6UXG2 1013 aaKnown RBP17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 SYDE1Q6ZW31 735 aaPredicted RBP17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 AENQ8WTP8 325 aaKnown RBP17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 SLC6A17Q9H1V8 727 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 FBXL12Q9NXK8 326 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 GOLGA6AQ9NYA3 693 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 FZD4Q9ULV1 537 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 NCKAP1Q9Y2A7 1128 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 WDFY4Q6ZS81 3184 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 C16orf96A6NNT2 1141 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 AXIN1O15169 862 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 FZD6O60353 706 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 MT-CYBP00156 380 aaPredicted RBP17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 MCM3P25205 808 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 PSMB4P28070 264 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 OXTRP30559 389 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 RPL22P35268 128 aaKnown RBP17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 DRD3P35462 400 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 GEMP55040 296 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 RPL26P61254 145 aaKnown RBP17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 DHX34Q14147 1143 aaKnown RBP17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 ERN2Q76MJ5 926 aaKnown RBP17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 MAATS1Q7Z4T9 603 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 JAMLQ86YT9 394 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 IFT20Q8IY31 132 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 AADATQ8N5Z0 425 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 GLIS1Q8NBF1 620 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 SPATA22Q8NHS9 363 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 CCHCR1Q8TD31 782 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 RUBCNQ92622 972 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 NELL1Q92832 810 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 RAB7BQ96AH8 199 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 OMDQ99983 421 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 TDRD1Q9BXT4 1180 aaKnown RBP17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 DPH5Q9H2P9 285 aa17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 RPL26L1Q9UNX3 145 aaKnown RBP17.21■□□□□ 0.35
RPRD1A-209ENST00000590898 ERI2A8K979 691 aaKnown RBP17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 PSMD3O43242 534 aa17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 SLC7A4O43246 635 aa17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 GALR2O43603 387 aaPredicted RBP17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 PGLSO95336 258 aa17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 METTL18O95568 372 aa17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 KRT14P02533 472 aa17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 FAM153BP0C7A2 387 aa17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 ETS1P14921 441 aa17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 TNFRSF8P28908 595 aa17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 ECHS1P30084 290 aa17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 TPMTP51580 245 aa17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 CSTF1Q05048 431 aaKnown RBP17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 TRAF2Q12933 501 aa17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 FAM153CQ494X1 144 aa17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 CFAP58Q5T655 872 aa17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 ARMC12Q5T9G4 340 aa17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 HDDC3Q8N4P3 179 aa17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 ARRDC3Q96B67 414 aa17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 OXNAD1Q96HP4 312 aaPredicted RBP17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 NEUROG2Q9H2A3 272 aa17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 PHTF1Q9UMS5 762 aa17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 PPIL1Q9Y3C6 166 aa17.2■□□□□ 0.34
RPRD1A-209ENST00000590898 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.19■□□□□ 0.34
RPRD1A-209ENST00000590898 CDK18Q07002 472 aa17.19■□□□□ 0.34
RPRD1A-209ENST00000590898 CNTN1Q12860 1018 aa17.19■□□□□ 0.34
RPRD1A-209ENST00000590898 UGP2Q16851 508 aa17.19■□□□□ 0.34
RPRD1A-209ENST00000590898 KDELC1Q6UW63 502 aa17.19■□□□□ 0.34
RPRD1A-209ENST00000590898 WDR5BQ86VZ2 330 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms