RNA–Protein interactions for RNA: ENST00000581250.5

PPP4R1-219, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-219	ENST00000581250	MMP13	P45452	471 aa		12	□□□□□ -0.49
PPP4R1-219	ENST00000581250	NOP2	P46087	812 aa	Known RBP	12	□□□□□ -0.49
PPP4R1-219	ENST00000581250	ARRB1	P49407	418 aa	Predicted RBP	12	□□□□□ -0.49
PPP4R1-219	ENST00000581250	RENBP	P51606	427 aa		12	□□□□□ -0.49
PPP4R1-219	ENST00000581250	AP1S1	P61966	158 aa		12	□□□□□ -0.49
PPP4R1-219	ENST00000581250	GBE1	Q04446	702 aa		12	□□□□□ -0.49
PPP4R1-219	ENST00000581250	BCL2L1	Q07817	233 aa		12	□□□□□ -0.49
PPP4R1-219	ENST00000581250	OVGP1	Q12889	678 aa		12	□□□□□ -0.49
PPP4R1-219	ENST00000581250	BNIP3	Q12983	259 aa		12	□□□□□ -0.49
PPP4R1-219	ENST00000581250	ZNF542P	Q5EBM4	170 aa		12	□□□□□ -0.49
PPP4R1-219	ENST00000581250	BRAT1	Q6PJG6	821 aa		12	□□□□□ -0.49
PPP4R1-219	ENST00000581250		Q6ZSR6	202 aa		12	□□□□□ -0.49
PPP4R1-219	ENST00000581250	MAP7D3	Q8IWC1	876 aa		12	□□□□□ -0.49
PPP4R1-219	ENST00000581250	PQLC3	Q8N755	202 aa		12	□□□□□ -0.49
PPP4R1-219	ENST00000581250	PNPLA1	Q8N8W4	532 aa		12	□□□□□ -0.49
PPP4R1-219	ENST00000581250	BAHD1	Q8TBE0	780 aa	Predicted RBP	12	□□□□□ -0.49
PPP4R1-219	ENST00000581250	PDCD6IP	Q8WUM4	868 aa	Known RBP	12	□□□□□ -0.49
PPP4R1-219	ENST00000581250	NSMCE1	Q8WV22	266 aa		12	□□□□□ -0.49
PPP4R1-219	ENST00000581250	ZNF641	Q96N77	438 aa	Predicted RBP	12	□□□□□ -0.49
PPP4R1-219	ENST00000581250	PSKH2	Q96QS6	385 aa		12	□□□□□ -0.49
PPP4R1-219	ENST00000581250	C1QTNF2	Q9BXJ5	285 aa		12	□□□□□ -0.49
PPP4R1-219	ENST00000581250	SCUBE2	Q9NQ36	999 aa		12	□□□□□ -0.49
PPP4R1-219	ENST00000581250	INTU	Q9ULD6	942 aa		12	□□□□□ -0.49
PPP4R1-219	ENST00000581250	TTLL3	Q9Y4R7	772 aa		12	□□□□□ -0.49
PPP4R1-219	ENST00000581250		A8MX80	341 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	TM7SF2	O76062	418 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	ATXN1L	P0C7T5	689 aa	Known RBP	11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	C6	P13671	934 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	COMT	P21964	271 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	KDELR1	P24390	212 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	CYLC1	P35663	651 aa	Predicted RBP	11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	IGFALS	P35858	605 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	GARS	P41250	739 aa	Known RBP	11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	ARHGAP25	P42331	645 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	CSNK1D	P48730	415 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	ELP6	Q0PNE2	266 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	GALNT2	Q10471	571 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	PAFAH1B3	Q15102	231 aa	Known RBP	11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	SPA17	Q15506	151 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	UGP2	Q16851	508 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	INAVA	Q3KP66	663 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	TPRG1L	Q5T0D9	272 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	FAM182A	Q5T1J6	154 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	ERAP2	Q6P179	960 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	KYAT3	Q6YP21	454 aa	Known RBP	11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	ABI3BP	Q7Z7G0	1075 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	BBS5	Q8N3I7	341 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	OXR1	Q8N573	874 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	EID2	Q8N6I1	236 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	SPC24	Q8NBT2	197 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	SAP25	Q8TEE9	199 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	FAF2	Q96CS3	445 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	BMF	Q96LC9	184 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	CNTNAP3B	Q96NU0	1288 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	PANX2	Q96RD6	677 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	KLF6	Q99612	283 aa	Predicted RBP	11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	MGME1	Q9BQP7	344 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	CNTNAP3	Q9BZ76	1288 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	NOD2	Q9HC29	1040 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	DNAJC28	Q9NX36	388 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	FTSJ1	Q9UET6	329 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	ATP8A1	Q9Y2Q0	1164 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	PCDHGC4	Q9Y5F7	938 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	PCDHA13	Q9Y5I0	950 aa		11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	ARID1B	Q8NFD5	2236 aa	Predicted RBP	11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	MAP1B	P46821	2468 aa	Known RBP	11.99	□□□□□ -0.49
PPP4R1-219	ENST00000581250	C3orf70	A6NLC5	250 aa	Predicted RBP	11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	RIOK3	O14730	519 aa	Known RBP	11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	FPGT	O14772	594 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	YKT6	O15498	198 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	FFAR2	O15552	330 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	NEBL	O76041	1014 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	HSPA9	P38646	679 aa	Known RBP	11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	LIG3	P49916	1009 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	DYNLT1	P63172	113 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	ITK	Q08881	620 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	SLC10A2	Q12908	348 aa	Predicted RBP	11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	TRAF2	Q12933	501 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	HNRNPD	Q14103	355 aa	Known RBP	11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	IRF4	Q15306	451 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	LLGL1	Q15334	1064 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	ODF2	Q5BJF6	829 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	MARC1	Q5VT66	337 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	NPNT	Q6UXI9	565 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	DBX2	Q6ZNG2	339 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	SLCO6A1	Q86UG4	719 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	ZSCAN30	Q86W11	494 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	RFX6	Q8HWS3	928 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	CCDC170	Q8IYT3	715 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	CHCHD4	Q8N4Q1	142 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	PLD5	Q8N7P1	536 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	CCNY	Q8ND76	341 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	RNF25	Q96BH1	459 aa	Predicted RBP	11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	ZNF830	Q96NB3	372 aa	Predicted RBP	11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	RNF157	Q96PX1	679 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	NUDCD1	Q96RS6	583 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	CDC6	Q99741	560 aa		11.98	□□□□□ -0.49
PPP4R1-219	ENST00000581250	ANP32E	Q9BTT0	268 aa		11.98	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms