RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 VPS36Q86VN1 386 aa14.8□□□□□ -0.04
FANCA-220ENST00000566409 ZSCAN30Q86W11 494 aa14.8□□□□□ -0.04
FANCA-220ENST00000566409 DENND6BQ8NEG7 585 aa14.8□□□□□ -0.04
FANCA-220ENST00000566409 FAM174AQ8TBP5 190 aa14.8□□□□□ -0.04
FANCA-220ENST00000566409 HCAR2Q8TDS4 363 aa14.8□□□□□ -0.04
FANCA-220ENST00000566409 HSPH1Q92598 858 aa14.8□□□□□ -0.04
FANCA-220ENST00000566409 IFT43Q96FT9 208 aa14.8□□□□□ -0.04
FANCA-220ENST00000566409 CSPG4P5Q96PW8 444 aa14.8□□□□□ -0.04
FANCA-220ENST00000566409 NCAPGQ9BPX3 1015 aa14.8□□□□□ -0.04
FANCA-220ENST00000566409 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.8□□□□□ -0.04
FANCA-220ENST00000566409 IPO11Q9UI26 975 aaKnown RBP14.8□□□□□ -0.04
FANCA-220ENST00000566409 ANAPC7Q9UJX3 599 aa14.8□□□□□ -0.04
FANCA-220ENST00000566409 URB1O60287 2271 aaKnown RBP14.8□□□□□ -0.04
FANCA-220ENST00000566409 TTC24A2A3L6 582 aaPredicted RBP14.79□□□□□ -0.04
FANCA-220ENST00000566409 FFAR2O15552 330 aa14.79□□□□□ -0.04
FANCA-220ENST00000566409 RFPL3O75679 317 aa14.79□□□□□ -0.04
FANCA-220ENST00000566409 CSF2P04141 144 aa14.79□□□□□ -0.04
FANCA-220ENST00000566409 PRKCGP05129 697 aa14.79□□□□□ -0.04
FANCA-220ENST00000566409 C1SP09871 688 aa14.79□□□□□ -0.04
FANCA-220ENST00000566409 NME1P15531 152 aaKnown RBP14.79□□□□□ -0.04
FANCA-220ENST00000566409 CKMT2P17540 419 aa14.79□□□□□ -0.04
FANCA-220ENST00000566409 IGFALSP35858 605 aa14.79□□□□□ -0.04
FANCA-220ENST00000566409 EIF4A3P38919 411 aaKnown RBP14.79□□□□□ -0.04
FANCA-220ENST00000566409 SLC10A7Q0GE19 358 aa14.79□□□□□ -0.04
FANCA-220ENST00000566409 EIF2B5Q13144 721 aaKnown RBP14.79□□□□□ -0.04
FANCA-220ENST00000566409 PDE1CQ14123 709 aaPredicted RBP14.79□□□□□ -0.04
FANCA-220ENST00000566409 ASTE1Q2TB18 679 aaPredicted RBP14.79□□□□□ -0.04
FANCA-220ENST00000566409 SKOR2Q2VWA4 1001 aaPredicted RBP14.79□□□□□ -0.04
FANCA-220ENST00000566409 DCP2Q8IU60 420 aaKnown RBP14.79□□□□□ -0.04
FANCA-220ENST00000566409 GALNT15Q8N3T1 639 aa14.79□□□□□ -0.04
FANCA-220ENST00000566409 TP53I13Q8NBR0 393 aaPredicted RBP14.79□□□□□ -0.04
FANCA-220ENST00000566409 OR4C6Q8NH72 309 aa14.79□□□□□ -0.04
FANCA-220ENST00000566409 MDM1Q8TC05 714 aa14.79□□□□□ -0.04
FANCA-220ENST00000566409 TEKT4Q8WW24 435 aa14.79□□□□□ -0.04
FANCA-220ENST00000566409 ZNF641Q96N77 438 aaPredicted RBP14.79□□□□□ -0.04
FANCA-220ENST00000566409 PACSIN1Q9BY11 444 aa14.79□□□□□ -0.04
FANCA-220ENST00000566409 SP110Q9HB58 689 aa14.79□□□□□ -0.04
FANCA-220ENST00000566409 PCDH18Q9HCL0 1135 aa14.79□□□□□ -0.04
FANCA-220ENST00000566409 PCDH12Q9NPG4 1184 aa14.79□□□□□ -0.04
FANCA-220ENST00000566409 DNAJC28Q9NX36 388 aa14.79□□□□□ -0.04
FANCA-220ENST00000566409 IP6K2Q9UHH9 426 aa14.79□□□□□ -0.04
FANCA-220ENST00000566409 COQ6Q9Y2Z9 468 aa14.79□□□□□ -0.04
FANCA-220ENST00000566409 RP1P56715 2156 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 LRP4O75096 1905 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 LY6G6EA0A0G2JKS1 128 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 TRABD2BA6NFA1 517 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 H3BRJ5 948 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 RIOK3O14730 519 aaKnown RBP14.78□□□□□ -0.04
FANCA-220ENST00000566409 NEBLO76041 1014 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 TM7SF2O76062 418 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 CD48P09326 243 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 MYF5P13349 255 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 ACP1P24666 158 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 SUOXP51687 545 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 ARSEP51690 589 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 NSUN2Q08J23 767 aaKnown RBP eCLIP14.78□□□□□ -0.04
FANCA-220ENST00000566409 MMRN1Q13201 1228 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 GRM3Q14832 879 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 ATP13A4Q4VNC1 1196 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 PARGQ86W56 976 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 PROSER1Q86XN7 944 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 PGBD5Q8N414 524 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 LZTR1Q8N653 840 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 FAM71BQ8TC56 605 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 CXorf40AQ8TE69 158 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 ECHDC3Q96DC8 303 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 PSKH2Q96QS6 385 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 TUBGCP5Q96RT8 1024 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 TCEAL2Q9H3H9 227 aaPredicted RBP14.78□□□□□ -0.04
FANCA-220ENST00000566409 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.78□□□□□ -0.04
FANCA-220ENST00000566409 U3KQA8 63 aa14.78□□□□□ -0.04
FANCA-220ENST00000566409 MYO1FO00160 1098 aa14.77□□□□□ -0.05
FANCA-220ENST00000566409 TRAFD1O14545 582 aaPredicted RBP14.77□□□□□ -0.05
FANCA-220ENST00000566409 SCAMP1O15126 338 aa14.77□□□□□ -0.05
FANCA-220ENST00000566409 MAFKO60675 156 aa14.77□□□□□ -0.05
FANCA-220ENST00000566409 CR2P20023 1033 aa14.77□□□□□ -0.05
FANCA-220ENST00000566409 MMP12P39900 470 aa14.77□□□□□ -0.05
FANCA-220ENST00000566409 ARL4AP40617 200 aa14.77□□□□□ -0.05
FANCA-220ENST00000566409 ELP6Q0PNE2 266 aa14.77□□□□□ -0.05
FANCA-220ENST00000566409 RFTN1Q14699 578 aaPredicted RBP14.77□□□□□ -0.05
FANCA-220ENST00000566409 LBRQ14739 615 aaKnown RBP14.77□□□□□ -0.05
FANCA-220ENST00000566409 IRF4Q15306 451 aa14.77□□□□□ -0.05
FANCA-220ENST00000566409 WSCD2Q2TBF2 565 aa14.77□□□□□ -0.05
FANCA-220ENST00000566409 BRAT1Q6PJG6 821 aa14.77□□□□□ -0.05
FANCA-220ENST00000566409 TMCO3Q6UWJ1 677 aa14.77□□□□□ -0.05
FANCA-220ENST00000566409 NYAP1Q6ZVC0 841 aa14.77□□□□□ -0.05
FANCA-220ENST00000566409 TMPRSS12Q86WS5 348 aa14.77□□□□□ -0.05
FANCA-220ENST00000566409 ZNF548Q8NEK5 533 aaPredicted RBP14.77□□□□□ -0.05
FANCA-220ENST00000566409 ZNF564Q8TBZ8 553 aaPredicted RBP14.77□□□□□ -0.05
FANCA-220ENST00000566409 DNAJC7Q99615 494 aa14.77□□□□□ -0.05
FANCA-220ENST00000566409 CINPQ9BW66 212 aaPredicted RBP14.77□□□□□ -0.05
FANCA-220ENST00000566409 ATP13A3Q9H7F0 1226 aa14.77□□□□□ -0.05
FANCA-220ENST00000566409 RALYQ9UKM9 306 aaKnown RBP14.77□□□□□ -0.05
FANCA-220ENST00000566409 IGSF10Q6WRI0 2623 aa14.77□□□□□ -0.05
FANCA-220ENST00000566409 K7ESM1 405 aa14.76□□□□□ -0.05
FANCA-220ENST00000566409 C6P13671 934 aa14.76□□□□□ -0.05
FANCA-220ENST00000566409 XPAP23025 273 aaPredicted RBP14.76□□□□□ -0.05
FANCA-220ENST00000566409 LIG3P49916 1009 aa14.76□□□□□ -0.05
FANCA-220ENST00000566409 SCNN1BP51168 640 aa14.76□□□□□ -0.05
FANCA-220ENST00000566409 HNRNPKP61978 463 aaKnown RBP eCLIP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms