RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	IGFBPL1	Q8WX77	278 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	SGCD	Q92629	289 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	JAKMIP2	Q96AA8	810 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	RNF183	Q96D59	192 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	ZNF419	Q96HQ0	510 aa	Predicted RBP	4.13	□□□□□ -1.75
RDX-208	ENST00000530085	PGAM5	Q96HS1	289 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	C1orf74	Q96LT6	269 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	BBS4	Q96RK4	519 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	SH2D3A	Q9BRG2	576 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	TUBB6	Q9BUF5	446 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	PNRC2	Q9NPJ4	139 aa	Known RBP	4.13	□□□□□ -1.75
RDX-208	ENST00000530085	RNF146	Q9NTX7	359 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	SEL1L	Q9UBV2	794 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	AGO2	Q9UKV8	859 aa	Known RBP	4.13	□□□□□ -1.75
RDX-208	ENST00000530085	RAP2C	Q9Y3L5	183 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	DMRT1	Q9Y5R6	373 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	SESN1	Q9Y6P5	492 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	SLC4A4	Q9Y6R1	1079 aa		4.13	□□□□□ -1.75
RDX-208	ENST00000530085	TRBV5-3	A0A0A0MS03	114 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	PRKCG	P05129	697 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	CTSA	P10619	480 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	SRD5A1	P18405	259 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	GABRB1	P18505	474 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	IL11	P20809	199 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	RFC1	P35251	1148 aa	Predicted RBP	4.12	□□□□□ -1.75
RDX-208	ENST00000530085	EIF2D	P41214	584 aa	Known RBP	4.12	□□□□□ -1.75
RDX-208	ENST00000530085	F2RL1	P55085	397 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	ELL	P55199	621 aa	Predicted RBP	4.12	□□□□□ -1.75
RDX-208	ENST00000530085	FHL2	Q14192	279 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	DRAP1	Q14919	205 aa	Predicted RBP	4.12	□□□□□ -1.75
RDX-208	ENST00000530085	COL28A1	Q2UY09	1125 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	PLEKHO1	Q53GL0	409 aa	Predicted RBP	4.12	□□□□□ -1.75
RDX-208	ENST00000530085	FAM133B	Q5BKY9	247 aa	Known RBP	4.12	□□□□□ -1.75
RDX-208	ENST00000530085	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.12	□□□□□ -1.75
RDX-208	ENST00000530085	NCAPH2	Q6IBW4	605 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	MIS18BP1	Q6P0N0	1132 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.12	□□□□□ -1.75
RDX-208	ENST00000530085	GALNT16	Q8N428	558 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	ZCCHC9	Q8N567	271 aa	Known RBP	4.12	□□□□□ -1.75
RDX-208	ENST00000530085	SNAPC3	Q92966	411 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	TMEM68	Q96MH6	324 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	SIN3A	Q96ST3	1273 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	NCAPG	Q9BPX3	1015 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	FAM118B	Q9BPY3	351 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	CDT1	Q9H211	546 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	PDZD7	Q9H5P4	517 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	AAMDC	Q9H7C9	122 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	MVB12B	Q9H7P6	319 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	PDE7B	Q9NP56	450 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	PDGFC	Q9NRA1	345 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	TMEM45A	Q9NWC5	275 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	4.12	□□□□□ -1.75
RDX-208	ENST00000530085	NDRG3	Q9UGV2	375 aa		4.12	□□□□□ -1.75
RDX-208	ENST00000530085	AAR2	Q9Y312	384 aa	Known RBP	4.12	□□□□□ -1.75
RDX-208	ENST00000530085	HSPB2	A8KAH6	182 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	CDRT15L2	A8MXV6	281 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085		F8W810	466 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	SH2B2	O14492	632 aa	Predicted RBP	4.11	□□□□□ -1.75
RDX-208	ENST00000530085	TP73	O15350	636 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	NDUFS3	O75489	264 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	RB1	P06400	928 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	KRT10	P13645	584 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	SELL	P14151	372 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	AGA	P20933	346 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	ATP5F1	P24539	256 aa	Predicted RBP	4.11	□□□□□ -1.75
RDX-208	ENST00000530085	EPHB2	P29323	1055 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	TNFSF8	P32971	234 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	SHMT1	P34896	483 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	CLCN5	P51795	746 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	PROK1	P58294	105 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	RPS13	P62277	151 aa	Known RBP	4.11	□□□□□ -1.75
RDX-208	ENST00000530085	PSMC6	P62333	389 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	GHRHR	Q02643	423 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	CALD1	Q05682	793 aa	Known RBP	4.11	□□□□□ -1.75
RDX-208	ENST00000530085	FOXF2	Q12947	444 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	HSPB2	Q16082	182 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	SGO1	Q5FBB7	561 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	CEP78	Q5JTW2	689 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	PIK3CD-AS1	Q5SR53	167 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	PAPD7	Q5XG87	772 aa	Known RBP	4.11	□□□□□ -1.75
RDX-208	ENST00000530085	KIAA0930	Q6ICG6	404 aa	Predicted RBP	4.11	□□□□□ -1.75
RDX-208	ENST00000530085	NAA16	Q6N069	864 aa	Predicted RBP	4.11	□□□□□ -1.75
RDX-208	ENST00000530085	LRRC8E	Q6NSJ5	796 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	CES5A	Q6NT32	575 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	ZNF66	Q6ZN08	573 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	ZNF788	Q6ZQV5	615 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	NOXA1	Q86UR1	476 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	SCML4	Q8N228	414 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	LRRC57	Q8N9N7	239 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	BOLL	Q8N9W6	283 aa	Known RBP	4.11	□□□□□ -1.75
RDX-208	ENST00000530085	POC5	Q8NA72	575 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	KDM1B	Q8NB78	822 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	GJC3	Q8NFK1	279 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	ZKSCAN4	Q969J2	545 aa	Predicted RBP	4.11	□□□□□ -1.75
RDX-208	ENST00000530085	EME1	Q96AY2	570 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	ARHGEF26	Q96DR7	871 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	ZNF333	Q96JL9	665 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	SIGLEC11	Q96RL6	698 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	MXRA8	Q9BRK3	442 aa		4.11	□□□□□ -1.75
RDX-208	ENST00000530085	WDR83	Q9BRX9	315 aa	Known RBP	4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms