RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 CCDC86Q9H6F5 360 aaKnown RBP7.9□□□□□ -1.14
BRCC3-208ENST00000453705 ERVMER34-1Q9H9K5 563 aa7.9□□□□□ -1.14
BRCC3-208ENST00000453705 SCPEP1Q9HB40 452 aa7.9□□□□□ -1.14
BRCC3-208ENST00000453705 IL21RQ9HBE5 538 aa7.9□□□□□ -1.14
BRCC3-208ENST00000453705 ZNF302Q9NR11 478 aa7.9□□□□□ -1.14
BRCC3-208ENST00000453705 GRID2IPA4D2P6 1211 aa7.9□□□□□ -1.15
BRCC3-208ENST00000453705 RNF40O75150 1001 aa7.9□□□□□ -1.15
BRCC3-208ENST00000453705 PDGFBP01127 241 aaPredicted RBP7.9□□□□□ -1.15
BRCC3-208ENST00000453705 ENO2P09104 434 aaPredicted RBP7.9□□□□□ -1.15
BRCC3-208ENST00000453705 PABPC4LP0CB38 370 aaKnown RBP7.9□□□□□ -1.15
BRCC3-208ENST00000453705 GAAP10253 952 aa7.9□□□□□ -1.15
BRCC3-208ENST00000453705 BMP1P13497 986 aa7.9□□□□□ -1.15
BRCC3-208ENST00000453705 TCP1P17987 556 aaKnown RBP7.9□□□□□ -1.15
BRCC3-208ENST00000453705 CYP2A7P20853 494 aa7.9□□□□□ -1.15
BRCC3-208ENST00000453705 AXLP30530 894 aa7.9□□□□□ -1.15
BRCC3-208ENST00000453705 VAMP7P51809 220 aa7.9□□□□□ -1.15
BRCC3-208ENST00000453705 IFI16Q16666 785 aaKnown RBP7.9□□□□□ -1.15
BRCC3-208ENST00000453705 ZC2HC1CQ53FD0 456 aaPredicted RBP7.9□□□□□ -1.15
BRCC3-208ENST00000453705 TOR2AQ5JU69 321 aa7.9□□□□□ -1.15
BRCC3-208ENST00000453705 WLSQ5T9L3 541 aa7.9□□□□□ -1.15
BRCC3-208ENST00000453705 SLFN12LQ6IEE8 588 aa7.9□□□□□ -1.15
BRCC3-208ENST00000453705 FSTL4Q6MZW2 842 aa7.9□□□□□ -1.15
BRCC3-208ENST00000453705 FOXR1Q6PIV2 292 aa7.9□□□□□ -1.15
BRCC3-208ENST00000453705 LINC01465Q8N7H1 131 aa7.9□□□□□ -1.15
BRCC3-208ENST00000453705 OR8K3Q8NH51 312 aa7.9□□□□□ -1.15
BRCC3-208ENST00000453705 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.9□□□□□ -1.15
BRCC3-208ENST00000453705 KAT2BQ92831 832 aa7.9□□□□□ -1.15
BRCC3-208ENST00000453705 RAB24Q969Q5 203 aa7.9□□□□□ -1.15
BRCC3-208ENST00000453705 IFIH1Q9BYX4 1025 aaKnown RBP7.9□□□□□ -1.15
BRCC3-208ENST00000453705 TMEM8AQ9HCN3 771 aa7.9□□□□□ -1.15
BRCC3-208ENST00000453705 FAM207AQ9NSI2 230 aaPredicted RBP7.9□□□□□ -1.15
BRCC3-208ENST00000453705 TUBA8Q9NY65 449 aaPredicted RBP7.9□□□□□ -1.15
BRCC3-208ENST00000453705 A8MXE2 369 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.89□□□□□ -1.15
BRCC3-208ENST00000453705 IGHEP01854 428 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 IRAK1P51617 712 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 RAB1AP62820 205 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 MYL7Q01449 175 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 GCNT1Q02742 428 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 NPRL3Q12980 569 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 LPIN1Q14693 890 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 EMC2Q15006 297 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 ZNF628Q5EBL2 1059 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 CELF3Q5SZQ8 465 aaKnown RBP7.89□□□□□ -1.15
BRCC3-208ENST00000453705 SHEQ5VZ18 495 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 SLC39A4Q6P5W5 647 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 KIAA1328Q86T90 577 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 PALM2Q8IXS6 379 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 MMGT1Q8N4V1 131 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 SCAMP5Q8TAC9 235 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 TCP11Q8WWU5 503 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 SLC22A18Q96BI1 424 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 HDAC11Q96DB2 347 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 USB1Q9BQ65 265 aaKnown RBP7.89□□□□□ -1.15
BRCC3-208ENST00000453705 CEP44Q9C0F1 390 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 LACRTQ9GZZ8 138 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 EPB41L5Q9HCM4 733 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 RBM12Q9NTZ6 932 aaKnown RBP7.89□□□□□ -1.15
BRCC3-208ENST00000453705 UCKL1Q9NWZ5 548 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 GCNT4Q9P109 453 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 PASKQ96RG2 1323 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 ATXN2Q99700 1313 aaKnown RBP7.89□□□□□ -1.15
BRCC3-208ENST00000453705 CCDC151A5D8V7 595 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 H3BQF6 201 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 IL18RAPO95256 599 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 THP07101 528 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 SELLP14151 372 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 BMPR1AP36894 532 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 MAGEA1P43355 309 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 PRRX1P54821 245 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 POLR2GP62487 172 aaKnown RBP eCLIP7.89□□□□□ -1.15
BRCC3-208ENST00000453705 DLG4P78352 724 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 SP2Q02086 613 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 XRCC4Q13426 336 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 RAPSNQ13702 412 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 PTPRNQ16849 979 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 C3orf36Q3SXR2 165 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 TMTC4Q5T4D3 741 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 IER5Q5VY09 327 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 VPS36Q86VN1 386 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 FAM217AQ8IXS0 508 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 PHACTR4Q8IZ21 702 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 EIF1ADQ8N9N8 165 aaKnown RBP7.89□□□□□ -1.15
BRCC3-208ENST00000453705 STK35Q8TDR2 534 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 FEM1CQ96JP0 617 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 CCDC77Q9BR77 488 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 KATNBL1Q9H079 304 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 QRSL1Q9H0R6 528 aaKnown RBP7.89□□□□□ -1.15
BRCC3-208ENST00000453705 EPN3Q9H201 632 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 ATP13A3Q9H7F0 1226 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 PRDM9Q9NQV7 894 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 SELENONQ9NZV5 590 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 SNX12Q9UMY4 172 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 LHX6Q9UPM6 363 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 CNTN6Q9UQ52 1028 aa7.89□□□□□ -1.15
BRCC3-208ENST00000453705 RNF103-CHMP3A0A140T963 221 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 GOLGA8IPA6NC78 632 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 FAM47DPA6NHR8 397 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 RNF103O00237 685 aa7.88□□□□□ -1.15
BRCC3-208ENST00000453705 DNM1LO00429 736 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms