RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 CNTD1Q8N815 330 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 RIBC2Q9H4K1 309 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 MIEF1Q9NQG6 463 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 KLHL28Q9NXS3 571 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.45□□□□□ -1.06
VPS36-201ENST00000378060 SH3BP4Q9P0V3 963 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 RAB26Q9ULW5 256 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 DERAQ9Y315 318 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 AZIN1O14977 448 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 AVILO75366 819 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 HGFP14210 728 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 VCLP18206 1134 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 CCNA2P20248 432 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 FGFR3P22607 806 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 ACSM2AQ08AH3 577 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 TSNQ15631 228 aaKnown RBP8.45□□□□□ -1.06
VPS36-201ENST00000378060 MAPKAPK3Q16644 382 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 UGCGQ16739 394 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 ACSM2BQ68CK6 577 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 CASP12Q6UXS9 341 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 ZNF605Q86T29 641 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 YAF2Q8IY57 180 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 PLD5Q8N7P1 536 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 SEPT8Q92599 483 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 FAM210AQ96ND0 272 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 OLFM1Q99784 485 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 C6orf62Q9GZU0 229 aaPredicted RBP8.45□□□□□ -1.06
VPS36-201ENST00000378060 SIX2Q9NPC8 291 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 DNAJB4Q9UDY4 337 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 SLC25A13Q9UJS0 675 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 RPS6KA6Q9UK32 745 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 CLCA2Q9UQC9 943 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 KLHL20Q9Y2M5 609 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 AOC2O75106 756 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 LYPLA1O75608 230 aaPredicted RBP8.45□□□□□ -1.06
VPS36-201ENST00000378060 LRG1P02750 347 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 ALDH2P05091 517 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 EIF2S1P05198 315 aaKnown RBP8.45□□□□□ -1.06
VPS36-201ENST00000378060 OR56A5P0C7T3 313 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 SP100P23497 879 aaPredicted RBP8.45□□□□□ -1.06
VPS36-201ENST00000378060 USP4Q13107 963 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 FSCN1Q16658 493 aaKnown RBP8.45□□□□□ -1.06
VPS36-201ENST00000378060 SLC25A52Q3SY17 297 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 KCTD21Q4G0X4 260 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 PDZK1Q5T2W1 519 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 ZDHHC24Q6UX98 284 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 DNAJC14Q6Y2X3 702 aaPredicted RBP8.45□□□□□ -1.06
VPS36-201ENST00000378060 SEMA4BQ9NPR2 832 aaPredicted RBP8.45□□□□□ -1.06
VPS36-201ENST00000378060 CACNA2D2Q9NY47 1150 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 SFMBT1Q9UHJ3 866 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 TMEM59LQ9UK28 342 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 CHKBQ9Y259 395 aa8.45□□□□□ -1.06
VPS36-201ENST00000378060 RLFQ13129 1914 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 NRCAMQ92823 1304 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 CENPXA8MT69 81 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 A8MUI8 341 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 UPP2O95045 317 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 EPN2O95208 641 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 FMO4P31512 558 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 GRM5P41594 1212 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 TTPAP49638 278 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 MOGSQ13724 837 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 ABHD15Q6UXT9 468 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 KIAA0319LQ8IZA0 1049 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 PGAM4Q8N0Y7 254 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 KRT78Q8N1N4 520 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 REPS1Q96D71 796 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 MUC13Q9H3R2 512 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 CCNB1IP1Q9NPC3 277 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 TBC1D30Q9Y2I9 924 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 LINC00854A0A1B0GVQ3 168 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 MDM4O15151 490 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 PEX11AO75192 247 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 PDE9AO76083 593 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 GSTM1P09488 218 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 BDNFP23560 247 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 GRK3P35626 688 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 MAGEA10P43363 369 aaPredicted RBP8.44□□□□□ -1.06
VPS36-201ENST00000378060 BLVRAP53004 296 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 MRPS5P82675 430 aaKnown RBP8.44□□□□□ -1.06
VPS36-201ENST00000378060 PSMD5Q16401 504 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 EEF1DP3Q658K8 133 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 CWF19L1Q69YN2 538 aaKnown RBP8.44□□□□□ -1.06
VPS36-201ENST00000378060 BNIPLQ7Z465 357 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 AMIGO2Q86SJ2 522 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 TTC30BQ8N4P2 665 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 BORCS5Q969J3 196 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 TMEM159Q96B96 161 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 CPXM1Q96SM3 734 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 PTPN18Q99952 460 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 DGCR6LQ9BY27 220 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 NUAK2Q9H093 628 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 IKZF4Q9H2S9 585 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 VPS45Q9NRW7 570 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 CDH22Q9UJ99 828 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 PACSIN3Q9UKS6 424 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 PADI4Q9UM07 663 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 FAM50BQ9Y247 325 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 VWA7Q9Y334 891 aa8.44□□□□□ -1.06
VPS36-201ENST00000378060 SPACA6W5XKT8 324 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms