RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 DUSP3P51452 185 aaPredicted RBP17.92■□□□□ 0.46
HDDC3-201ENST00000330334 ZBED6P86452 979 aa17.92■□□□□ 0.46
HDDC3-201ENST00000330334 INSM1Q01101 510 aaPredicted RBP17.92■□□□□ 0.46
HDDC3-201ENST00000330334 IL10RBQ08334 325 aa17.92■□□□□ 0.46
HDDC3-201ENST00000330334 TARDBPQ13148 414 aaKnown RBP eCLIP17.92■□□□□ 0.46
HDDC3-201ENST00000330334 DPYSL2Q16555 572 aa17.92■□□□□ 0.46
HDDC3-201ENST00000330334 PPP6R3Q5H9R7 873 aaPredicted RBP17.92■□□□□ 0.46
HDDC3-201ENST00000330334 NIPA2Q8N8Q9 360 aa17.92■□□□□ 0.46
HDDC3-201ENST00000330334 DCBLD1Q8N8Z6 715 aa17.92■□□□□ 0.46
HDDC3-201ENST00000330334 NETO2Q8NC67 525 aa17.92■□□□□ 0.46
HDDC3-201ENST00000330334 ZNF548Q8NEK5 533 aaPredicted RBP17.92■□□□□ 0.46
HDDC3-201ENST00000330334 NXPE2Q96DL1 559 aa17.92■□□□□ 0.46
HDDC3-201ENST00000330334 EXOC2Q96KP1 924 aa17.92■□□□□ 0.46
HDDC3-201ENST00000330334 ZNF599Q96NL3 588 aa17.92■□□□□ 0.46
HDDC3-201ENST00000330334 SCUBE2Q9NQ36 999 aa17.92■□□□□ 0.46
HDDC3-201ENST00000330334 KLF15Q9UIH9 416 aa17.92■□□□□ 0.46
HDDC3-201ENST00000330334 NBEAQ8NFP9 2946 aa17.92■□□□□ 0.46
HDDC3-201ENST00000330334 URB1O60287 2271 aaKnown RBP17.92■□□□□ 0.46
HDDC3-201ENST00000330334 FFAR2O15552 330 aa17.91■□□□□ 0.46
HDDC3-201ENST00000330334 BUB1BO60566 1050 aaPredicted RBP17.91■□□□□ 0.46
HDDC3-201ENST00000330334 JUNDP17535 347 aa17.91■□□□□ 0.46
HDDC3-201ENST00000330334 PEX5P50542 639 aa17.91■□□□□ 0.46
HDDC3-201ENST00000330334 DAB2P98082 770 aa17.91■□□□□ 0.46
HDDC3-201ENST00000330334 EIF2B5Q13144 721 aaKnown RBP17.91■□□□□ 0.46
HDDC3-201ENST00000330334 RTP5Q14D33 572 aa17.91■□□□□ 0.46
HDDC3-201ENST00000330334 ZNF542PQ5EBM4 170 aa17.91■□□□□ 0.46
HDDC3-201ENST00000330334 TMCO4Q5TGY1 634 aa17.91■□□□□ 0.46
HDDC3-201ENST00000330334 ERAP2Q6P179 960 aa17.91■□□□□ 0.46
HDDC3-201ENST00000330334 SRLQ86TD4 932 aa17.91■□□□□ 0.46
HDDC3-201ENST00000330334 NPWQ8N729 165 aa17.91■□□□□ 0.46
HDDC3-201ENST00000330334 TP53I13Q8NBR0 393 aaPredicted RBP17.91■□□□□ 0.46
HDDC3-201ENST00000330334 TSEN2Q8NCE0 465 aaKnown RBP17.91■□□□□ 0.46
HDDC3-201ENST00000330334 SPOCK2Q92563 424 aa17.91■□□□□ 0.46
HDDC3-201ENST00000330334 APOLD1Q96LR9 279 aa17.91■□□□□ 0.46
HDDC3-201ENST00000330334 ATP13A3Q9H7F0 1226 aa17.91■□□□□ 0.46
HDDC3-201ENST00000330334 PCDH12Q9NPG4 1184 aa17.91■□□□□ 0.46
HDDC3-201ENST00000330334 MYO1AQ9UBC5 1043 aa17.91■□□□□ 0.46
HDDC3-201ENST00000330334 SALL4Q9UJQ4 1053 aa17.91■□□□□ 0.46
HDDC3-201ENST00000330334 CLCA2Q9UQC9 943 aa17.91■□□□□ 0.46
HDDC3-201ENST00000330334 RAXQ9Y2V3 346 aa17.91■□□□□ 0.46
HDDC3-201ENST00000330334 LY6G6EA0A0G2JKS1 128 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 TMEM110-MUSTN1A8MSY1 372 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 H3BRJ5 948 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 AQP9O43315 295 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 PIGNO95427 931 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 ITIH2P19823 946 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 PTMSP20962 102 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 IL1R2P27930 398 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 SERPINA4P29622 427 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 IGFALSP35858 605 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 RENBPP51606 427 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 THOP1P52888 689 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 POLR2LP62875 67 aaKnown RBP17.9■□□□□ 0.46
HDDC3-201ENST00000330334 LRRC14Q15048 493 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 TDRD12Q587J7 1177 aaKnown RBP17.9■□□□□ 0.46
HDDC3-201ENST00000330334 LRRC73Q5JTD7 316 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 TPRG1LQ5T0D9 272 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 ZCCHC8Q6NZY4 707 aaKnown RBP17.9■□□□□ 0.46
HDDC3-201ENST00000330334 POLNQ7Z5Q5 900 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 CAMK1DQ8IU85 385 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 TEKT4Q8WW24 435 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 ECHDC3Q96DC8 303 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 PSKH2Q96QS6 385 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 SP110Q9HB58 689 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 SPASTQ9UBP0 616 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 LUC7L2Q9Y383 392 aaKnown RBP17.9■□□□□ 0.46
HDDC3-201ENST00000330334 U3KQA8 63 aa17.9■□□□□ 0.46
HDDC3-201ENST00000330334 A0A087WV48 116 aa17.89■□□□□ 0.45
HDDC3-201ENST00000330334 GOLGA6L19H0YKK7 550 aa17.89■□□□□ 0.45
HDDC3-201ENST00000330334 DFFAO00273 331 aa17.89■□□□□ 0.45
HDDC3-201ENST00000330334 CYP1A2P05177 515 aa17.89■□□□□ 0.45
HDDC3-201ENST00000330334 ARL4AP40617 200 aa17.89■□□□□ 0.45
HDDC3-201ENST00000330334 RGRP47804 291 aa17.89■□□□□ 0.45
HDDC3-201ENST00000330334 CFAP58Q5T655 872 aa17.89■□□□□ 0.45
HDDC3-201ENST00000330334 CDCP2Q5VXM1 449 aa17.89■□□□□ 0.45
HDDC3-201ENST00000330334 MACC1Q6ZN28 852 aa17.89■□□□□ 0.45
HDDC3-201ENST00000330334 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.89■□□□□ 0.45
HDDC3-201ENST00000330334 WRAP53Q9BUR4 548 aaKnown RBP17.89■□□□□ 0.45
HDDC3-201ENST00000330334 CINPQ9BW66 212 aaPredicted RBP17.89■□□□□ 0.45
HDDC3-201ENST00000330334 MBNL1Q9NR56 388 aaKnown RBP17.89■□□□□ 0.45
HDDC3-201ENST00000330334 SEPT3Q9UH03 358 aa17.89■□□□□ 0.45
HDDC3-201ENST00000330334 IP6K2Q9UHH9 426 aa17.89■□□□□ 0.45
HDDC3-201ENST00000330334 LHX6Q9UPM6 363 aa17.89■□□□□ 0.45
HDDC3-201ENST00000330334 ATP8A1Q9Y2Q0 1164 aa17.89■□□□□ 0.45
HDDC3-201ENST00000330334 A0A087X0T9 212 aa17.88■□□□□ 0.45
HDDC3-201ENST00000330334 LMO7DNF2Z398 122 aa17.88■□□□□ 0.45
HDDC3-201ENST00000330334 OPA1O60313 960 aa17.88■□□□□ 0.45
HDDC3-201ENST00000330334 NEBLO76041 1014 aa17.88■□□□□ 0.45
HDDC3-201ENST00000330334 MT-CO3P00414 261 aa17.88■□□□□ 0.45
HDDC3-201ENST00000330334 FAM228BP0C875 321 aa17.88■□□□□ 0.45
HDDC3-201ENST00000330334 C6P13671 934 aa17.88■□□□□ 0.45
HDDC3-201ENST00000330334 HSPA9P38646 679 aaKnown RBP17.88■□□□□ 0.45
HDDC3-201ENST00000330334 EIF4A3P38919 411 aaKnown RBP17.88■□□□□ 0.45
HDDC3-201ENST00000330334 MMP12P39900 470 aa17.88■□□□□ 0.45
HDDC3-201ENST00000330334 BLKP51451 505 aa17.88■□□□□ 0.45
HDDC3-201ENST00000330334 CLDN6P56747 220 aa17.88■□□□□ 0.45
HDDC3-201ENST00000330334 AP1S1P61966 158 aa17.88■□□□□ 0.45
HDDC3-201ENST00000330334 BCL2L1Q07817 233 aa17.88■□□□□ 0.45
HDDC3-201ENST00000330334 WSCD2Q2TBF2 565 aa17.88■□□□□ 0.45
HDDC3-201ENST00000330334 SDR16C5Q8N3Y7 309 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms