RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 PHF13Q86YI8 300 aaPredicted RBP11.32□□□□□ -0.6
TARDBP-221ENST00000619555 LMX1AQ8TE12 382 aa11.32□□□□□ -0.6
TARDBP-221ENST00000619555 ASB12Q8WXK4 309 aa11.32□□□□□ -0.6
TARDBP-221ENST00000619555 NTAN1Q96AB6 310 aa11.32□□□□□ -0.6
TARDBP-221ENST00000619555 RAB7BQ96AH8 199 aa11.32□□□□□ -0.6
TARDBP-221ENST00000619555 SYT11Q9BT88 431 aa11.32□□□□□ -0.6
TARDBP-221ENST00000619555 DUSP23Q9BVJ7 150 aa11.32□□□□□ -0.6
TARDBP-221ENST00000619555 SELENOOQ9BVL4 669 aa11.32□□□□□ -0.6
TARDBP-221ENST00000619555 TCEAL2Q9H3H9 227 aaPredicted RBP11.32□□□□□ -0.6
TARDBP-221ENST00000619555 RETREG1Q9H6L5 497 aa11.32□□□□□ -0.6
TARDBP-221ENST00000619555 CPED1A4D0V7 1026 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 SIGLEC16A6NMB1 481 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 EIF4E1BA6NMX2 242 aaKnown RBP11.31□□□□□ -0.6
TARDBP-221ENST00000619555 AREL1O15033 823 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 INSIG1O15503 277 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 CCP110O43303 1012 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 KALRNO60229 2985 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 MMP20O60882 483 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 CSO75390 466 aaKnown RBP11.31□□□□□ -0.6
TARDBP-221ENST00000619555 TMCC1O94876 653 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 MPOP05164 745 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 TIMP2P16035 220 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 DUSP3P51452 185 aaPredicted RBP11.31□□□□□ -0.6
TARDBP-221ENST00000619555 GEMIN4P57678 1058 aaKnown RBP11.31□□□□□ -0.6
TARDBP-221ENST00000619555 PFN3P60673 137 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 C1orf61Q13536 156 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 CDKN3Q16667 212 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 DEFB133Q30KQ1 61 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 FIGNQ5HY92 759 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 SCYL2Q6P3W7 929 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 GDPD4Q6W3E5 623 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 SLFN11Q7Z7L1 901 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 TTC7BQ86TV6 843 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 VPS36Q86VN1 386 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 ZSCAN30Q86W11 494 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 RBFAQ8N0V3 343 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 RTL3Q8N8U3 475 aaKnown RBP11.31□□□□□ -0.6
TARDBP-221ENST00000619555 DENND6BQ8NEG7 585 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 IFI44Q8TCB0 444 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 MAPK15Q8TD08 544 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 CENPTQ96BT3 561 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 HMCESQ96FZ2 354 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 OSBPL1AQ9BXW6 950 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 ABCG4Q9H172 646 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 SEPT11Q9NVA2 429 aaKnown RBP11.31□□□□□ -0.6
TARDBP-221ENST00000619555 PNMA8BQ9ULN7 279 aaPredicted RBP11.31□□□□□ -0.6
TARDBP-221ENST00000619555 CSNK1G3Q9Y6M4 447 aa11.31□□□□□ -0.6
TARDBP-221ENST00000619555 CFAP46Q8IYW2 2715 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 LRRK1Q38SD2 2015 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 TCRBV5S1A1TA0A578 114 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 ZSCAN5CA6NGD5 496 aaPredicted RBP11.3□□□□□ -0.6
TARDBP-221ENST00000619555 RASA4BC9J798 803 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 H3BM21 787 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 AQP9O43315 295 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 RASA4O43374 803 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 USP12O75317 370 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 GCATO75600 419 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 PRB1P04280 392 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 GYPCP04921 128 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 CALB1P05937 261 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 GP1BAP07359 652 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 EPHB2P29323 1055 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 IGFALSP35858 605 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 GSCP56915 257 aaPredicted RBP11.3□□□□□ -0.6
TARDBP-221ENST00000619555 RHOAP61586 193 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 RPL7AP62424 266 aaKnown RBP11.3□□□□□ -0.6
TARDBP-221ENST00000619555 EFHC2Q5JST6 749 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 ZCCHC8Q6NZY4 707 aaKnown RBP11.3□□□□□ -0.6
TARDBP-221ENST00000619555 GUSBP11Q6P575 273 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 CRTC1Q6UUV9 634 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 MON1BQ7L1V2 547 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 EFL1Q7Z2Z2 1120 aaKnown RBP11.3□□□□□ -0.6
TARDBP-221ENST00000619555 SPACA3Q8IXA5 215 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 C3orf20Q8ND61 904 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 NAF1Q96HR8 494 aaKnown RBP11.3□□□□□ -0.6
TARDBP-221ENST00000619555 GDAP1L1Q96MZ0 367 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 DEPDC7Q96QD5 511 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 UBL7Q96S82 380 aaPredicted RBP11.3□□□□□ -0.6
TARDBP-221ENST00000619555 AGPAT1Q99943 283 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 USP29Q9HBJ7 922 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 MBNL1Q9NR56 388 aaKnown RBP11.3□□□□□ -0.6
TARDBP-221ENST00000619555 MYO6Q9UM54 1294 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 AHCTF1Q8WYP5 2266 aa11.3□□□□□ -0.6
TARDBP-221ENST00000619555 ZNF462Q96JM2 2506 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 CASC3O15234 703 aaKnown RBP11.29□□□□□ -0.6
TARDBP-221ENST00000619555 CREB3O43889 395 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 TM7SF2O76062 418 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 PIGNO95427 931 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 IGSF6O95976 241 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 FERP16591 822 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 TGM2P21980 687 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 ZNF143P52747 638 aaPredicted RBP11.29□□□□□ -0.6
TARDBP-221ENST00000619555 THOP1P52888 689 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 ADKP55263 362 aaKnown RBP11.29□□□□□ -0.6
TARDBP-221ENST00000619555 GABREP78334 506 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 TLE3Q04726 772 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 RAD51Q06609 339 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 CYTH1Q15438 398 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 ISXQ2M1V0 245 aa11.29□□□□□ -0.6
TARDBP-221ENST00000619555 INO80DQ53TQ3 878 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms