RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 TBC1D3BA6NDS4 549 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 K7EQS6 105 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 TRAFD1O14545 582 aaPredicted RBP7.56□□□□□ -1.2
VPS45-213ENST00000618148 HTRA2O43464 458 aaPredicted RBP7.56□□□□□ -1.2
VPS45-213ENST00000618148 FZD6O60353 706 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 GJB3O75712 270 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 NEBLO76041 1014 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 IGSF6O95976 241 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 PRLP01236 227 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 ATXN1LP0C7T5 689 aaKnown RBP7.56□□□□□ -1.2
VPS45-213ENST00000618148 DRD1P21728 446 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 CD86P42081 329 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 NUMBP49757 651 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 GALK1P51570 392 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 WNT3AP56704 352 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 SNRPD1P62314 119 aaKnown RBP7.56□□□□□ -1.2
VPS45-213ENST00000618148 HLTFQ14527 1009 aaKnown RBP eCLIP7.56□□□□□ -1.2
VPS45-213ENST00000618148 GRM3Q14832 879 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 DLG2Q15700 870 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 HIF1AQ16665 826 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 NAPEPLDQ6IQ20 393 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 FSTL4Q6MZW2 842 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 LRRC8BQ6P9F7 803 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 CEP128Q6ZU80 1094 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 SRLQ86TD4 932 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 LINC00523Q86TU6 105 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 OR2A12Q8NGT7 310 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 TTC8Q8TAM2 541 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 CYB5D2Q8WUJ1 264 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 UCMAQ8WVF2 138 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 IFT81Q8WYA0 676 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 ANKRD7Q92527 254 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 ECHDC3Q96DC8 303 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 FEM1CQ96JP0 617 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 RBM15Q96T37 977 aaKnown RBP eCLIP7.56□□□□□ -1.2
VPS45-213ENST00000618148 TDRD1Q9BXT4 1180 aaKnown RBP7.56□□□□□ -1.2
VPS45-213ENST00000618148 CASS4Q9NQ75 786 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 MTRF1LQ9UGC7 380 aaKnown RBP7.56□□□□□ -1.2
VPS45-213ENST00000618148 PLA2G4CQ9UP65 541 aa7.56□□□□□ -1.2
VPS45-213ENST00000618148 CKAP5Q14008 2032 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 EDDM13A0A1B0GTR0 161 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 TSPAN11A1L157 253 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 TTC34A8MYJ7 566 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 E7EVH7 732 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 AP3B1O00203 1094 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 ALOX15BO15296 676 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 POP4O95707 220 aaKnown RBP7.55□□□□□ -1.2
VPS45-213ENST00000618148 FAM153BP0C7A2 387 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 HLA-DPA1P20036 260 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 NNMTP40261 264 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 SLC19A1P41440 591 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 SCNN1BP51168 640 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 CCNHP51946 323 aaPredicted RBP7.55□□□□□ -1.2
VPS45-213ENST00000618148 ARL4CP56559 192 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 RPL26P61254 145 aaKnown RBP7.55□□□□□ -1.2
VPS45-213ENST00000618148 SARNPP82979 210 aaKnown RBP7.55□□□□□ -1.2
VPS45-213ENST00000618148 PRKCQQ04759 706 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 MSLNQ13421 630 aaPredicted RBP7.55□□□□□ -1.2
VPS45-213ENST00000618148 CAMK2BQ13554 666 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 CCINQ13939 588 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 ZNF234Q14588 700 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 MLF2Q15773 248 aaPredicted RBP7.55□□□□□ -1.2
VPS45-213ENST00000618148 MYLK3Q32MK0 819 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 FAM153CQ494X1 144 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 MAP9Q49MG5 647 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 SLC44A4Q53GD3 710 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 CARD16Q5EG05 197 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 ATXN7L2Q5T6C5 722 aaPredicted RBP7.55□□□□□ -1.2
VPS45-213ENST00000618148 EGFLAMQ63HQ2 1017 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 DPY19L3Q6ZPD9 716 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 Q6ZVU0 165 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 TMC3Q7Z5M5 1100 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 AGGF1Q8N302 714 aaeCLIP7.55□□□□□ -1.2
VPS45-213ENST00000618148 MREGQ8N565 214 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 TAB3Q8N5C8 712 aaPredicted RBP7.55□□□□□ -1.2
VPS45-213ENST00000618148 PTPRN2Q92932 1015 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 LRRC39Q96DD0 335 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 LRIG1Q96JA1 1093 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 EXOC2Q96KP1 924 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 ZNF641Q96N77 438 aaPredicted RBP7.55□□□□□ -1.2
VPS45-213ENST00000618148 ASB2Q96Q27 587 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 GABRG3Q99928 467 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 TBL1YQ9BQ87 522 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 WDR83Q9BRX9 315 aaKnown RBP7.55□□□□□ -1.2
VPS45-213ENST00000618148 TM6SF2Q9BZW4 377 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 CD248Q9HCU0 757 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 WNT16Q9UBV4 365 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 RPL26L1Q9UNX3 145 aaKnown RBP7.55□□□□□ -1.2
VPS45-213ENST00000618148 SLC8A2Q9UPR5 921 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 TTLL3Q9Y4R7 772 aa7.55□□□□□ -1.2
VPS45-213ENST00000618148 F5H423 210 aaPredicted RBP7.54□□□□□ -1.2
VPS45-213ENST00000618148 MAN2B1O00754 1011 aa7.54□□□□□ -1.2
VPS45-213ENST00000618148 DYNC1I1O14576 645 aa7.54□□□□□ -1.2
VPS45-213ENST00000618148 PMPCBO75439 489 aa7.54□□□□□ -1.2
VPS45-213ENST00000618148 NDST3O95803 873 aa7.54□□□□□ -1.2
VPS45-213ENST00000618148 FGF1P05230 155 aa7.54□□□□□ -1.2
VPS45-213ENST00000618148 CA4P22748 312 aa7.54□□□□□ -1.2
VPS45-213ENST00000618148 PRKCHP24723 683 aa7.54□□□□□ -1.2
VPS45-213ENST00000618148 GRIA1P42261 906 aa7.54□□□□□ -1.2
VPS45-213ENST00000618148 IL12RB1P42701 662 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms