RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 PEX11BO96011 259 aa22.58■■□□□ 1.21
GTF2F1-204ENST00000594965 THEGLP0DJG4 465 aa22.58■■□□□ 1.21
GTF2F1-204ENST00000594965 SPINK2P20155 84 aa22.58■■□□□ 1.21
GTF2F1-204ENST00000594965 AKT2P31751 481 aa22.58■■□□□ 1.21
GTF2F1-204ENST00000594965 SSR1P43307 286 aaKnown RBP22.58■■□□□ 1.21
GTF2F1-204ENST00000594965 RXRGP48443 463 aa22.58■■□□□ 1.21
GTF2F1-204ENST00000594965 CSNK1DP48730 415 aa22.58■■□□□ 1.21
GTF2F1-204ENST00000594965 TMCO3Q6UWJ1 677 aa22.58■■□□□ 1.21
GTF2F1-204ENST00000594965 ABI3BPQ7Z7G0 1075 aa22.58■■□□□ 1.21
GTF2F1-204ENST00000594965 TTC7BQ86TV6 843 aa22.58■■□□□ 1.21
GTF2F1-204ENST00000594965 SLCO6A1Q86UG4 719 aa22.58■■□□□ 1.21
GTF2F1-204ENST00000594965 CNGA4Q8IV77 575 aa22.58■■□□□ 1.21
GTF2F1-204ENST00000594965 BMFQ96LC9 184 aa22.58■■□□□ 1.21
GTF2F1-204ENST00000594965 NSMCE3Q96MG7 304 aa22.58■■□□□ 1.21
GTF2F1-204ENST00000594965 KLF6Q99612 283 aaPredicted RBP22.58■■□□□ 1.21
GTF2F1-204ENST00000594965 TRIM5Q9C035 493 aa22.58■■□□□ 1.21
GTF2F1-204ENST00000594965 RBSNQ9H1K0 784 aa22.58■■□□□ 1.21
GTF2F1-204ENST00000594965 TOR4AQ9NXH8 423 aa22.58■■□□□ 1.21
GTF2F1-204ENST00000594965 HS3ST3A1Q9Y663 406 aa22.58■■□□□ 1.21
GTF2F1-204ENST00000594965 PLXNB3Q9ULL4 1909 aa22.57■■□□□ 1.2
GTF2F1-204ENST00000594965 ARID1BQ8NFD5 2236 aaPredicted RBP22.57■■□□□ 1.2
GTF2F1-204ENST00000594965 TSPAN11A1L157 253 aa22.57■■□□□ 1.2
GTF2F1-204ENST00000594965 MAGEC1O60732 1142 aa22.57■■□□□ 1.2
GTF2F1-204ENST00000594965 FTH1P19P0C7X4 201 aa22.57■■□□□ 1.2
GTF2F1-204ENST00000594965 EPHA8P29322 1005 aaPredicted RBP22.57■■□□□ 1.2
GTF2F1-204ENST00000594965 SLC10A7Q0GE19 358 aa22.57■■□□□ 1.2
GTF2F1-204ENST00000594965 BNIP3Q12983 259 aa22.57■■□□□ 1.2
GTF2F1-204ENST00000594965 DPYSL3Q14195 570 aa22.57■■□□□ 1.2
GTF2F1-204ENST00000594965 KRT81Q14533 505 aa22.57■■□□□ 1.2
GTF2F1-204ENST00000594965 RFTN1Q14699 578 aaPredicted RBP22.57■■□□□ 1.2
GTF2F1-204ENST00000594965 HADHQ16836 314 aaKnown RBP22.57■■□□□ 1.2
GTF2F1-204ENST00000594965 KANSL1Q7Z3B3 1105 aa22.57■■□□□ 1.2
GTF2F1-204ENST00000594965 SRLQ86TD4 932 aa22.57■■□□□ 1.2
GTF2F1-204ENST00000594965 ZSWIM9Q86XI8 627 aa22.57■■□□□ 1.2
GTF2F1-204ENST00000594965 SLC22A18ASQ8N1D0 253 aa22.57■■□□□ 1.2
GTF2F1-204ENST00000594965 TC2NQ8N9U0 490 aa22.57■■□□□ 1.2
GTF2F1-204ENST00000594965 OR13H1Q8NG92 308 aa22.57■■□□□ 1.2
GTF2F1-204ENST00000594965 HCAR2Q8TDS4 363 aa22.57■■□□□ 1.2
GTF2F1-204ENST00000594965 CCDC42Q96M95 316 aa22.57■■□□□ 1.2
GTF2F1-204ENST00000594965 SUV39H2Q9H5I1 410 aa22.57■■□□□ 1.2
GTF2F1-204ENST00000594965 RCOR3Q9P2K3 495 aaPredicted RBP22.57■■□□□ 1.2
GTF2F1-204ENST00000594965 GJC1P36383 396 aa22.56■■□□□ 1.2
GTF2F1-204ENST00000594965 GRK6P43250 576 aa22.56■■□□□ 1.2
GTF2F1-204ENST00000594965 NSUN2Q08J23 767 aaKnown RBP eCLIP22.56■■□□□ 1.2
GTF2F1-204ENST00000594965 GRM3Q14832 879 aa22.56■■□□□ 1.2
GTF2F1-204ENST00000594965 ZSCAN30Q86W11 494 aa22.56■■□□□ 1.2
GTF2F1-204ENST00000594965 CAMK1DQ8IU85 385 aa22.56■■□□□ 1.2
GTF2F1-204ENST00000594965 OXR1Q8N573 874 aa22.56■■□□□ 1.2
GTF2F1-204ENST00000594965 SLC35G2Q8TBE7 412 aa22.56■■□□□ 1.2
GTF2F1-204ENST00000594965 ASB12Q8WXK4 309 aa22.56■■□□□ 1.2
GTF2F1-204ENST00000594965 LENG8Q96PV6 779 aaPredicted RBP22.56■■□□□ 1.2
GTF2F1-204ENST00000594965 CINPQ9BW66 212 aaPredicted RBP22.56■■□□□ 1.2
GTF2F1-204ENST00000594965 SCNM1Q9BWG6 230 aa22.56■■□□□ 1.2
GTF2F1-204ENST00000594965 CAAP1Q9H8G2 361 aa22.56■■□□□ 1.2
GTF2F1-204ENST00000594965 GPR27Q9NS67 375 aa22.56■■□□□ 1.2
GTF2F1-204ENST00000594965 KLHL11Q9NVR0 708 aa22.56■■□□□ 1.2
GTF2F1-204ENST00000594965 POM121BA6NF01 834 aa22.55■■□□□ 1.2
GTF2F1-204ENST00000594965 NEMP1O14524 444 aa22.55■■□□□ 1.2
GTF2F1-204ENST00000594965 YKT6O15498 198 aa22.55■■□□□ 1.2
GTF2F1-204ENST00000594965 HYAL3O43820 417 aaPredicted RBP22.55■■□□□ 1.2
GTF2F1-204ENST00000594965 MAFKO60675 156 aa22.55■■□□□ 1.2
GTF2F1-204ENST00000594965 MAN1A1P33908 653 aa22.55■■□□□ 1.2
GTF2F1-204ENST00000594965 ARRB1P49407 418 aaPredicted RBP22.55■■□□□ 1.2
GTF2F1-204ENST00000594965 LBRQ14739 615 aaKnown RBP22.55■■□□□ 1.2
GTF2F1-204ENST00000594965 RAB44Q7Z6P3 723 aaPredicted RBP22.55■■□□□ 1.2
GTF2F1-204ENST00000594965 PNPLA1Q8N8W4 532 aa22.55■■□□□ 1.2
GTF2F1-204ENST00000594965 ZNF641Q96N77 438 aaPredicted RBP22.55■■□□□ 1.2
GTF2F1-204ENST00000594965 ZNF599Q96NL3 588 aa22.55■■□□□ 1.2
GTF2F1-204ENST00000594965 PSKH2Q96QS6 385 aa22.55■■□□□ 1.2
GTF2F1-204ENST00000594965 TUBGCP5Q96RT8 1024 aa22.55■■□□□ 1.2
GTF2F1-204ENST00000594965 CDC6Q99741 560 aa22.55■■□□□ 1.2
GTF2F1-204ENST00000594965 MMP20O60882 483 aa22.54■■□□□ 1.2
GTF2F1-204ENST00000594965 MTA2O94776 668 aa22.54■■□□□ 1.2
GTF2F1-204ENST00000594965 DKK1O94907 266 aa22.54■■□□□ 1.2
GTF2F1-204ENST00000594965 ITGAVP06756 1048 aa22.54■■□□□ 1.2
GTF2F1-204ENST00000594965 ATXN1LP0C7T5 689 aaKnown RBP22.54■■□□□ 1.2
GTF2F1-204ENST00000594965 UGP2Q16851 508 aa22.54■■□□□ 1.2
GTF2F1-204ENST00000594965 TMEM52BQ4KMG9 183 aa22.54■■□□□ 1.2
GTF2F1-204ENST00000594965 TMCO4Q5TGY1 634 aa22.54■■□□□ 1.2
GTF2F1-204ENST00000594965 KYAT3Q6YP21 454 aaKnown RBP22.54■■□□□ 1.2
GTF2F1-204ENST00000594965 KDM7AQ6ZMT4 941 aa22.54■■□□□ 1.2
GTF2F1-204ENST00000594965 Q6ZSR6 202 aa22.54■■□□□ 1.2
GTF2F1-204ENST00000594965 PGBD5Q8N414 524 aa22.54■■□□□ 1.2
GTF2F1-204ENST00000594965 CHCHD4Q8N4Q1 142 aa22.54■■□□□ 1.2
GTF2F1-204ENST00000594965 PCDH19Q8TAB3 1148 aa22.54■■□□□ 1.2
GTF2F1-204ENST00000594965 SEPT3Q9UH03 358 aa22.54■■□□□ 1.2
GTF2F1-204ENST00000594965 LCMT1Q9UIC8 334 aa22.54■■□□□ 1.2
GTF2F1-204ENST00000594965 TTC24A2A3L6 582 aaPredicted RBP22.53■■□□□ 1.2
GTF2F1-204ENST00000594965 A6NNZ2 444 aa22.53■■□□□ 1.2
GTF2F1-204ENST00000594965 TMEM110-MUSTN1A8MSY1 372 aa22.53■■□□□ 1.2
GTF2F1-204ENST00000594965 MFSD11O43934 449 aa22.53■■□□□ 1.2
GTF2F1-204ENST00000594965 SERPINB6P35237 376 aa22.53■■□□□ 1.2
GTF2F1-204ENST00000594965 SGCGQ13326 291 aa22.53■■□□□ 1.2
GTF2F1-204ENST00000594965 MESDQ14696 234 aa22.53■■□□□ 1.2
GTF2F1-204ENST00000594965 PAFAH1B3Q15102 231 aaKnown RBP22.53■■□□□ 1.2
GTF2F1-204ENST00000594965 ANKRD20A8PQ5CZ79 823 aa22.53■■□□□ 1.2
GTF2F1-204ENST00000594965 NCBP2-AS2Q69YL0 99 aa22.53■■□□□ 1.2
GTF2F1-204ENST00000594965 GAS2L3Q86XJ1 694 aa22.53■■□□□ 1.2
GTF2F1-204ENST00000594965 KCTD6Q8NC69 237 aa22.53■■□□□ 1.2
GTF2F1-204ENST00000594965 FAM174AQ8TBP5 190 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms