RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 CCNHP51946 323 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 RPL7AP62424 266 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 CCDC173Q0VFZ6 552 aa17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 MAPK8IP2Q13387 824 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 ALKBH5Q6P6C2 394 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 PARS2Q7L3T8 475 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 PARGQ86W56 976 aa17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 ZNF548Q8NEK5 533 aaPredicted RBP17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 ASB12Q8WXK4 309 aa17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 NTAN1Q96AB6 310 aa17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 ISG20Q96AZ6 181 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 NCAPGQ9BPX3 1015 aa17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 C1QTNF2Q9BXJ5 285 aa17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 OSBPL2Q9H1P3 480 aa17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 DEF6Q9H4E7 631 aa17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 RETREG1Q9H6L5 497 aa17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 NCKIPSDQ9NZQ3 722 aa17.82■□□□□ 0.44
SHKBP1-203ENST00000594298 AKR1B15C9JRZ8 316 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-203ENST00000594298 H3BM21 787 aa17.81■□□□□ 0.44
SHKBP1-203ENST00000594298 CCP110O43303 1012 aa17.81■□□□□ 0.44
SHKBP1-203ENST00000594298 TSPAN6O43657 245 aa17.81■□□□□ 0.44
SHKBP1-203ENST00000594298 ETFBP38117 255 aa17.81■□□□□ 0.44
SHKBP1-203ENST00000594298 LSSP48449 732 aa17.81■□□□□ 0.44
SHKBP1-203ENST00000594298 AIF1P55008 147 aa17.81■□□□□ 0.44
SHKBP1-203ENST00000594298 PCBP4P57723 403 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-203ENST00000594298 ERVPABLB-1P60509 514 aa17.81■□□□□ 0.44
SHKBP1-203ENST00000594298 NRG1Q02297 640 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-203ENST00000594298 ZNF542PQ5EBM4 170 aa17.81■□□□□ 0.44
SHKBP1-203ENST00000594298 CCDC122Q5T0U0 273 aa17.81■□□□□ 0.44
SHKBP1-203ENST00000594298 ZCCHC8Q6NZY4 707 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-203ENST00000594298 SCYL2Q6P3W7 929 aa17.81■□□□□ 0.44
SHKBP1-203ENST00000594298 SLFN11Q7Z7L1 901 aa17.81■□□□□ 0.44
SHKBP1-203ENST00000594298 RAB7BQ96AH8 199 aa17.81■□□□□ 0.44
SHKBP1-203ENST00000594298 KLF6Q99612 283 aaPredicted RBP17.81■□□□□ 0.44
SHKBP1-203ENST00000594298 ABCG4Q9H172 646 aa17.81■□□□□ 0.44
SHKBP1-203ENST00000594298 MYO1AQ9UBC5 1043 aa17.81■□□□□ 0.44
SHKBP1-203ENST00000594298 FCF1Q9Y324 198 aaKnown RBP17.81■□□□□ 0.44
SHKBP1-203ENST00000594298 MYLKQ15746 1914 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 A0A087X0T9 212 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 SSU72P8A0A1W2PR75 194 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 TMEM191CA6NGB0 347 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 FPGTO14772 594 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 MFAP3LO75121 409 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 CSO75390 466 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 NEBLO76041 1014 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 RNF8O76064 485 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 MPOP05164 745 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 PLEKP08567 350 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 FAM228BP0C875 321 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 MYF5P13349 255 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 PSMA2P25787 234 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 EIF4A3P38919 411 aaKnown RBP17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 DNA2P51530 1060 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 HDAC4P56524 1084 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 PFN3P60673 137 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 GABREP78334 506 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 MANEALQ5VSG8 457 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 DENND6BQ8NEG7 585 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 IFI44Q8TCB0 444 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 FNIP1Q8TF40 1166 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 GRAMD1AQ96CP6 724 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 LGMNQ99538 433 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 POLR1BQ9H9Y6 1135 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 ABHD10Q9NUJ1 306 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 HECAQ9UBI9 543 aaPredicted RBP17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 OR12D3Q9UGF7 316 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 SALL4Q9UJQ4 1053 aa17.8■□□□□ 0.44
SHKBP1-203ENST00000594298 TPP1O14773 563 aa17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 ATMINO43313 823 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 USP12O75317 370 aa17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 ACVRL1P37023 503 aa17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 MAPKAPK2P49137 400 aa17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 ADKP55263 362 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 GEMIN4P57678 1058 aaKnown RBP17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 CXADRP78310 365 aa17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 SGCGQ13326 291 aa17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 PDE1CQ14123 709 aaPredicted RBP17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 ZNF805Q5CZA5 627 aa17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 EFHC2Q5JST6 749 aa17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 IGF2-ASQ6U949 168 aa17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 NLRP14Q86W24 1093 aa17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 MAPK15Q8TD08 544 aa17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 VOPP1Q96AW1 172 aa17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 MRFAP1L1Q96HT8 127 aa17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 CCDC42Q96M95 316 aa17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 TM6SF2Q9BZW4 377 aa17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 ZDHHC6Q9H6R6 413 aa17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 KLF15Q9UIH9 416 aa17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 ACTL7AQ9Y615 435 aa17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 DOCK9Q9BZ29 2069 aa17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 ASXL3Q9C0F0 2248 aa17.79■□□□□ 0.44
SHKBP1-203ENST00000594298 IGLON5A6NGN9 336 aa17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 C16orf96A6NNT2 1141 aa17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 SPINT1O43278 529 aa17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 AQP9O43315 295 aa17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 AKR1B10O60218 316 aa17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 GSRP00390 522 aa17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 RHOQP17081 205 aa17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 ABL2P42684 1182 aa17.78■□□□□ 0.44
SHKBP1-203ENST00000594298 ZNF75DP51815 510 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms