RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 CCR5P51681 352 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 BCL2L1Q07817 233 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 AP1B1Q10567 949 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 TFDP2Q14188 446 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 GRM3Q14832 879 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 SLC23A3Q6PIS1 610 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 ADAT2Q7Z6V5 191 aaKnown RBP16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 TTC7BQ86TV6 843 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 NT5DC3Q86UY8 548 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 CCDC13Q8IYE1 715 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 EXD1Q8NHP7 514 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 SERAC1Q96JX3 654 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 SLC6A18Q96N87 628 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 MYOCQ99972 504 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 HEMGNQ9BXL5 484 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 SUV39H2Q9H5I1 410 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 TM9SF3Q9HD45 589 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 LZTFL1Q9NQ48 299 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 AASDHPPTQ9NRN7 309 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 SEPT10Q9P0V9 454 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 SAE1Q9UBE0 346 aaPredicted RBP16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 PCDHA3Q9Y5H8 950 aa16.03■□□□□ 0.16
RABGGTA-206ENST00000558649 PCDH15Q96QU1 1955 aa16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 A0A1W2PPC4 97 aa16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 CCDC66A2RUB6 948 aa16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 KCNK1O00180 336 aa16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 MATN3O15232 486 aa16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 CCNB1P14635 433 aa16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 PECAM1P16284 738 aaPredicted RBP16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 PRLRP16471 622 aa16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 HSPA9P38646 679 aaKnown RBP16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 CSNK1DP48730 415 aa16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 CSNK1EP49674 416 aaKnown RBP16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 AFF3P51826 1226 aaKnown RBP16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 ATXN3P54252 364 aaPredicted RBP16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 RWDD2BP57060 319 aa16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 AP1S1P61966 158 aa16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 ADCY2Q08462 1091 aa16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 NSUN2Q08J23 767 aaKnown RBP eCLIP16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 RSPO4Q2I0M5 234 aaPredicted RBP16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 FAM182AQ5T1J6 154 aa16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 SEL1L3Q68CR1 1132 aa16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 PRPF39Q86UA1 669 aaKnown RBP16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 TRIM69Q86WT6 500 aa16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 OR2I1PQ8NGU4 316 aa16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 PDCD6IPQ8WUM4 868 aaKnown RBP16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 HDAC11Q96DB2 347 aa16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 TUBGCP5Q96RT8 1024 aa16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 MGME1Q9BQP7 344 aa16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 ORAI3Q9BRQ5 295 aa16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 CEP41Q9BYV8 373 aa16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 CAPN10Q9HC96 672 aa16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 RBM22Q9NW64 420 aaKnown RBP eCLIP16.02■□□□□ 0.164e-8■■■■□ 23.7
RABGGTA-206ENST00000558649 CDV3Q9UKY7 258 aaKnown RBP16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 FADS3Q9Y5Q0 445 aa16.02■□□□□ 0.16
RABGGTA-206ENST00000558649 FAM186AA6NE01 2351 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 A0A1B0GVT2 93 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 PRR5-ARHGAP8B1AHC4 643 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 PPP1R12AO14974 1030 aaPredicted RBP16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 SLC31A1O15431 190 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 PRKCGP05129 697 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 ITIH2P19823 946 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 ARHGAP8P85298 464 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 PPIDQ08752 370 aaKnown RBP16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 GRIK2Q13002 908 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 HNRNPDQ14103 355 aaKnown RBP16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 PDK1Q15118 436 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 TEAD4Q15561 434 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 TAZQ16635 292 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 SETMARQ53H47 684 aaPredicted RBP16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 CCDC181Q5TID7 509 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 AADACL2Q6P093 401 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 HORMAD1Q86X24 394 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 UBL4BQ8N7F7 174 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 C1orf216Q8TAB5 229 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 ALG3Q92685 438 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 RAB7BQ96AH8 199 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 NSMCE3Q96MG7 304 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 ZNF641Q96N77 438 aaPredicted RBP16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 OLFM3Q96PB7 478 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 TSGA13Q96PP4 275 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 NUDCD1Q96RS6 583 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 WRAP53Q9BUR4 548 aaKnown RBP16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 NOD2Q9HC29 1040 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 FZD3Q9NPG1 666 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 DKK3Q9UBP4 350 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 ZFR2Q9UPR6 939 aaKnown RBP16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 PCDHGC4Q9Y5F7 938 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 EP300Q09472 2414 aaPredicted RBP16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 DOCK9Q9BZ29 2069 aa16.01■□□□□ 0.15
RABGGTA-206ENST00000558649 TMEM131Q92545 1883 aa16■□□□□ 0.15
RABGGTA-206ENST00000558649 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16■□□□□ 0.15
RABGGTA-206ENST00000558649 UPK3BL1B0FP48 263 aa16■□□□□ 0.15
RABGGTA-206ENST00000558649 UPK3BL2E5RIL1 263 aa16■□□□□ 0.15
RABGGTA-206ENST00000558649 ARHGAP33O14559 1287 aa16■□□□□ 0.15
RABGGTA-206ENST00000558649 WNT9AO14904 365 aa16■□□□□ 0.15
RABGGTA-206ENST00000558649 SPINT1O43278 529 aa16■□□□□ 0.15
RABGGTA-206ENST00000558649 LATO43561 262 aa16■□□□□ 0.15
RABGGTA-206ENST00000558649 AP1G1O43747 822 aa16■□□□□ 0.15
RABGGTA-206ENST00000558649 JCHAINP01591 159 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms