RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 NT5C3BQ969T7 300 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 C18orf25Q96B23 403 aaPredicted RBP11.6□□□□□ -0.55
DDB1-224ENST00000545894 TMA16Q96EY4 203 aaKnown RBP11.6□□□□□ -0.55
DDB1-224ENST00000545894 MARK4Q96L34 752 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 SNX27Q96L92 541 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 NPY6RQ99463 290 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 MLPHQ9BV36 600 aaPredicted RBP11.6□□□□□ -0.55
DDB1-224ENST00000545894 GBA3Q9H227 469 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 DDX18Q9NVP1 670 aaKnown RBP11.6□□□□□ -0.55
DDB1-224ENST00000545894 GALNT8Q9NY28 637 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 SNTG2Q9NY99 539 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 STAP1Q9ULZ2 295 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 MAGED2Q9UNF1 606 aaPredicted RBP11.6□□□□□ -0.55
DDB1-224ENST00000545894 RAD54BQ9Y620 910 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 COPG1Q9Y678 874 aaKnown RBP11.6□□□□□ -0.55
DDB1-224ENST00000545894 H0YJX3 145 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 XPO1O14980 1071 aaKnown RBP11.6□□□□□ -0.55
DDB1-224ENST00000545894 NCAM2O15394 837 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 PHGDHO43175 533 aaKnown RBP11.6□□□□□ -0.55
DDB1-224ENST00000545894 RNASEH2AO75792 299 aaKnown RBP11.6□□□□□ -0.55
DDB1-224ENST00000545894 JUNP05412 331 aaKnown RBP11.6□□□□□ -0.55
DDB1-224ENST00000545894 FAM200BP0CF97 657 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 PSMC3P17980 439 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 ERCC2P18074 760 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 SAT1P21673 171 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 GLRBP48167 497 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 RGS19P49795 217 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 PPIDQ08752 370 aaKnown RBP11.6□□□□□ -0.55
DDB1-224ENST00000545894 NME3Q13232 169 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 SLC12A1Q13621 1099 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 DSC3Q14574 896 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 C9orf57Q5W0N0 161 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 BNIPLQ7Z465 357 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 PIGZQ86VD9 579 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 ZC3HC1Q86WB0 502 aaKnown RBP11.6□□□□□ -0.55
DDB1-224ENST00000545894 KCTD4Q8WVF5 259 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 IRGQQ8WZA9 623 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 EME1Q96AY2 570 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 NPAS2Q99743 824 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 HAUS8Q9BT25 410 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 DNAI2Q9GZS0 605 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 SNX25Q9H3E2 840 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 RHOJQ9H4E5 214 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 CIDEBQ9UHD4 219 aa11.6□□□□□ -0.55
DDB1-224ENST00000545894 RUVBL2Q9Y230 463 aaKnown RBP11.6□□□□□ -0.55
DDB1-224ENST00000545894 PIN4Q9Y237 131 aaKnown RBP11.6□□□□□ -0.55
DDB1-224ENST00000545894 TARM1B6A8C7 271 aa11.59□□□□□ -0.55
DDB1-224ENST00000545894 GOLGA8TH3BQL2 631 aa11.59□□□□□ -0.55
DDB1-224ENST00000545894 MTSS1O43312 755 aa11.59□□□□□ -0.55
DDB1-224ENST00000545894 ACRP10323 421 aa11.59□□□□□ -0.55
DDB1-224ENST00000545894 COL6A2P12110 1019 aa11.59□□□□□ -0.55
DDB1-224ENST00000545894 ZNF26P17031 533 aaPredicted RBP11.59□□□□□ -0.55
DDB1-224ENST00000545894 TCN1P20061 433 aaPredicted RBP11.59□□□□□ -0.55
DDB1-224ENST00000545894 DNAJB1P25685 340 aa11.59□□□□□ -0.55
DDB1-224ENST00000545894 NMBRP28336 390 aa11.59□□□□□ -0.55
DDB1-224ENST00000545894 AXLP30530 894 aa11.59□□□□□ -0.55
DDB1-224ENST00000545894 CD68P34810 354 aaPredicted RBP11.59□□□□□ -0.55
DDB1-224ENST00000545894 MGAT5BQ3V5L5 792 aa11.59□□□□□ -0.55
DDB1-224ENST00000545894 GLRA4Q5JXX5 417 aa11.59□□□□□ -0.55
DDB1-224ENST00000545894 ITPRIPL1Q6GPH6 555 aa11.59□□□□□ -0.55
DDB1-224ENST00000545894 LRRC8EQ6NSJ5 796 aa11.59□□□□□ -0.55
DDB1-224ENST00000545894 AMIGO2Q86SJ2 522 aa11.59□□□□□ -0.55
DDB1-224ENST00000545894 RTN4RL1Q86UN2 441 aaPredicted RBP11.59□□□□□ -0.55
DDB1-224ENST00000545894 CHERPQ8IWX8 916 aaKnown RBP11.59□□□□□ -0.55
DDB1-224ENST00000545894 FSTL5Q8N475 847 aaPredicted RBP11.59□□□□□ -0.55
DDB1-224ENST00000545894 LZICQ8WZA0 190 aa11.59□□□□□ -0.55
DDB1-224ENST00000545894 SEPT8Q92599 483 aa11.59□□□□□ -0.55
DDB1-224ENST00000545894 ASB9Q96DX5 294 aa11.59□□□□□ -0.55
DDB1-224ENST00000545894 APOL2Q9BQE5 337 aa11.59□□□□□ -0.55
DDB1-224ENST00000545894 SUDS3Q9H7L9 328 aaPredicted RBP11.59□□□□□ -0.55
DDB1-224ENST00000545894 MRPL40Q9NQ50 206 aaKnown RBP11.59□□□□□ -0.55
DDB1-224ENST00000545894 UTP6Q9NYH9 597 aaKnown RBP11.59□□□□□ -0.55
DDB1-224ENST00000545894 ADA2Q9NZK5 511 aa11.59□□□□□ -0.55
DDB1-224ENST00000545894 TRHDEQ9UKU6 1024 aa11.59□□□□□ -0.55
DDB1-224ENST00000545894 SCN1AP35498 2009 aa11.59□□□□□ -0.55
DDB1-224ENST00000545894 TRPC5OSA6NMA1 111 aa11.58□□□□□ -0.55
DDB1-224ENST00000545894 DLX3O60479 287 aa11.58□□□□□ -0.55
DDB1-224ENST00000545894 SLC35E2BP0CK96 405 aa11.58□□□□□ -0.55
DDB1-224ENST00000545894 TPH1P17752 444 aa11.58□□□□□ -0.55
DDB1-224ENST00000545894 TKTP29401 623 aaKnown RBP11.58□□□□□ -0.55
DDB1-224ENST00000545894 SLC5A2P31639 672 aa11.58□□□□□ -0.55
DDB1-224ENST00000545894 UBXN11Q5T124 520 aa11.58□□□□□ -0.55
DDB1-224ENST00000545894 IL23RQ5VWK5 629 aa11.58□□□□□ -0.55
DDB1-224ENST00000545894 PAOXQ6QHF9 649 aa11.58□□□□□ -0.55
DDB1-224ENST00000545894 C16orf59Q7L2K0 433 aa11.58□□□□□ -0.55
DDB1-224ENST00000545894 KDM1BQ8NB78 822 aa11.58□□□□□ -0.55
DDB1-224ENST00000545894 FAM156AQ8NDB6 213 aa11.58□□□□□ -0.55
DDB1-224ENST00000545894 LINC01599Q8WXQ3 324 aa11.58□□□□□ -0.55
DDB1-224ENST00000545894 EIF2AQ9BY44 585 aaKnown RBP11.58□□□□□ -0.55
DDB1-224ENST00000545894 BRD8Q9H0E9 1235 aa11.58□□□□□ -0.55
DDB1-224ENST00000545894 PIGVQ9NUD9 493 aa11.58□□□□□ -0.55
DDB1-224ENST00000545894 SUCOQ9UBS9 1254 aaKnown RBP11.58□□□□□ -0.55
DDB1-224ENST00000545894 AP4S1Q9Y587 144 aa11.58□□□□□ -0.55
DDB1-224ENST00000545894 CEPT1Q9Y6K0 416 aa11.58□□□□□ -0.55
DDB1-224ENST00000545894 CITO14578 2027 aa11.58□□□□□ -0.56
DDB1-224ENST00000545894 FAM72CH0Y354 149 aa11.58□□□□□ -0.56
DDB1-224ENST00000545894 H3BSA7 217 aa11.58□□□□□ -0.56
DDB1-224ENST00000545894 TRMUO75648 421 aaKnown RBP11.58□□□□□ -0.56
DDB1-224ENST00000545894 C8BP07358 591 aa11.58□□□□□ -0.56
DDB1-224ENST00000545894 CDK4P11802 303 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 296 ms