RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 ZNF696Q9H7X3 374 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 SNX15Q9NRS6 342 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 MKS1Q9NXB0 559 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 TMEM216Q9P0N5 145 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 PCDHB5Q9Y5E4 795 aa11.69□□□□□ -0.54
USP35-207ENST00000530546 TRIM43BA6NCK2 446 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 TMEM247A6NEH6 219 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 MOXD2PA6NHM9 499 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 MAFKO60675 156 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 GLRA3O75311 464 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 OAZ2O95190 189 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 CDH17Q12864 832 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 EIF4EBP2Q13542 120 aaPredicted RBP11.68□□□□□ -0.54
USP35-207ENST00000530546 PSMD5Q16401 504 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 PCSK7Q16549 785 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 MGAT5BQ3V5L5 792 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 NAPEPLDQ6IQ20 393 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 TMEM135Q86UB9 458 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 CRLF3Q8IUI8 442 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 METTL25Q8N6Q8 603 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 ACVR1CQ8NER5 493 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 VPS50Q96JG6 964 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 CLPTM1LQ96KA5 538 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 CPNE1Q99829 537 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 SOX13Q9UN79 622 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 LZTS1Q9Y250 596 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 SQORQ9Y6N5 450 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 ERI2A8K979 691 aaKnown RBP11.68□□□□□ -0.54
USP35-207ENST00000530546 TXNDC9O14530 226 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 MAGEB3O15480 346 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 ITM2AO43736 263 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 CCNT2O60583 730 aaKnown RBP11.68□□□□□ -0.54
USP35-207ENST00000530546 CCNCP24863 283 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 PEX2P28328 305 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 HOXD12P35452 270 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 NPY2RP49146 381 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 AQP5P55064 265 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 TBX4P57082 545 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 ITKQ08881 620 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 NFE2Q16621 373 aaPredicted RBP11.68□□□□□ -0.54
USP35-207ENST00000530546 USP41Q3LFD5 358 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 TEDDM1Q5T9Z0 273 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 GRTP1Q5TC63 336 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 PIK3R6Q5UE93 754 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 LPCAT4Q643R3 524 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 LHX8Q68G74 356 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 FSTL4Q6MZW2 842 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 FBXL19Q6PCT2 694 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 TMC7Q7Z402 723 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 MON1AQ86VX9 555 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 TREML1Q86YW5 311 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 TNS4Q8IZW8 715 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 FBXO27Q8NI29 283 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 FBXO32Q969P5 355 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 SERPINB11Q96P15 392 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 RBBP8Q99708 897 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 WWP1Q9H0M0 922 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 GLOD4Q9HC38 313 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 CREBZFQ9NS37 354 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 SUN2Q9UH99 717 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 ADAMTS6Q9UKP5 1117 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 PADI4Q9UM07 663 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 SORCS3Q9UPU3 1222 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 ZNF711Q9Y462 761 aa11.68□□□□□ -0.54
USP35-207ENST00000530546 PLIN3O60664 434 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 HLA-DQB2P05538 268 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 ALOX15P16050 662 aaPredicted RBP11.67□□□□□ -0.54
USP35-207ENST00000530546 PAX3P23760 479 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 SPRP35270 261 aaPredicted RBP11.67□□□□□ -0.54
USP35-207ENST00000530546 FAM189BP81408 668 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 IRF9Q00978 393 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 DEFB115Q30KQ5 88 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 MYLK3Q32MK0 819 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 DHRS4L2Q6PKH6 230 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 ERI1Q8IV48 349 aaKnown RBP11.67□□□□□ -0.54
USP35-207ENST00000530546 C10orf107Q8IVU9 208 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 PLD6Q8N2A8 252 aaKnown RBP11.67□□□□□ -0.54
USP35-207ENST00000530546 RILPQ96NA2 401 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 BIRC8Q96P09 236 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 TBL1YQ9BQ87 522 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 IL22Q9GZX6 179 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 HMX1Q9NP08 348 aaPredicted RBP11.67□□□□□ -0.54
USP35-207ENST00000530546 PFDN4Q9NQP4 134 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 PPARGC1AQ9UBK2 798 aaKnown RBP11.67□□□□□ -0.54
USP35-207ENST00000530546 PCDHB7Q9Y5E2 793 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 AK5Q9Y6K8 562 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 A0A088AWK7 358 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.67□□□□□ -0.54
USP35-207ENST00000530546 INPPL1O15357 1258 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 FGF10O15520 208 aaPredicted RBP11.67□□□□□ -0.54
USP35-207ENST00000530546 NBNO60934 754 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 CNTN5O94779 1100 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 SLC5A2P31639 672 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 CHRNA4P43681 627 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 NR1H2P55055 460 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 MAXP61244 160 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 CREB5Q02930 508 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 NAB1Q13506 487 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 SEPT6Q14141 434 aa11.67□□□□□ -0.54
USP35-207ENST00000530546 LRRC36Q1X8D7 754 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms